Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0831 ATGGCCTCGCACAAGAATATCTCTTTTGTTCTCCATGCCTTGGTGTTTGCAGCATTTGCAACCACAGTGTTCTCAAAATTGTCACCTCATTACTATGACTACTCGTGCCCTAACGCTTTGAGCACCATTAGAAGTGTTGTGGAAGCTGCGGTGCAGAAAGAACGGCGTATGGGCGCTTCTTTATTACGCTTGCACTTCCATGATTGCTTTGTTAATGGTTGTGATGGCTCAATTCTACTAGACCCCTCACCCACCATTGACAGCGAAAAGAATGCAATTCCTAATTTTCAGTCTGTAAGAGGATTTGAAGTGGTGGATGCGATCAAGCAAGCAGTGGACGAAGCATGCGGAAAACCAGTTGTTTCTTGCGCTGATATACTGGCTGTAGCCGCTCGTGACTCTGTGGTTGCGGTGAGGGGGGCAACATGGAATGTGAGATTGGGGAGAAGAGACTCCACCACAGCAAGCCGTGATGCTGCAAATGCCAACATCCCTCCACCATTCTTCAGTCTTTCTCAACTTATTAGCAACTTCAAGAGCCATGGCCTAAATGAGAAGGACTTGGTTGTTCTTTCTGGAGGCCACACAATTGGATATGCACGTTGTACTACTTTTCGGGACCATATCTACAATGACTCTAATATCAATCCCCACTTTGCAGAAGCACTTAAATACATTTGCCCAAGAGAAGGAGGAGACTTCAACCTTGCTCCTTTGGATCAAACAACGGCACACTTTGATTCAGCTTACTTCTCTGATTTGGTTCATAAAAGAGGGATTCTTCACTCCGATCAGGAACTGTTCAATGGTGGTTCTACGGATGCATTGGTTAAGAAATACAGCTACGATACCGTAGCTTTCTTCAAGGACTTCGCAAAATCTATGATTAAGATGGGAAATATAAAGCCCCTCACCGGGAATCAGGGTGAAATTCGTTTGAATTGCAGGATGGTAAACTGA 960 0.449 MASHKNISFVLHALVFAAFATTVFSKLSPHYYDYSCPNALSTIRSVVEAAVQKERRMGASLLRLHFHDCFVNGCDGSILLDPSPTIDSEKNAIPNFQSVRGFEVVDAIKQAVDEACGKPVVSCADILAVAARDSVVAVRGATWNVRLGRRDSTTASRDAANANIPPPFFSLSQLISNFKSHGLNEKDLVVLSGGHTIGYARCTTFRDHIYNDSNINPHFAEALKYICPREGGDFNLAPLDQTTAHFDSAYFSDLVHKRGILHSDQELFNGGSTDALVKKYSYDTVAFFKDFAKSMIKMGNIKPLTGNQGEIRLNCRMVN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0831 319 PANTHER PEROXIDASE 72-RELATED 23 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 Pfam Peroxidase 44 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 Gene3D Peroxidase, domain 2 165 298 - -
Apr10g0831 319 SUPERFAMILY Heme-dependent peroxidases 27 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 Gene3D - 31 319 - -
Apr10g0831 319 PANTHER PEROXIDASE 23 318 - -
Apr10g0831 319 CDD secretory_peroxidase 26 318 IPR033905 GO:0004601|GO:0042744
Apr10g0831 319 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Apr10g0831 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Apr10g0831 319 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0831 319 ProSiteProfiles Plant heme peroxidase family profile. 26 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0831 Apr-Chr10 20565086 20567258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0831 23 319 Peroxidase AT5G05340 59.333 3.33e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0831 K00430 - gmx:100812820 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0831 10 20565086 20567258 Apr10g0831 10 20565086 20567258 ECH
Apr4g2119 4 30195753 30197898 Apr10g0831 10 20565086 20567258 PCT