Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0829 ATGGTAACAGCTACTGTGTTGAACGAACCTCGCATGGGTGCATCTTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGGTGTGATGGATCAGTATTGTTAGAGAACAATGCAATTTTCACAGGCGAACAAAGTGCTCTTCCCAACCTTAATTCTCTAAGGGGTTTCGATGTCATAGAAAACATAAAAGCTAAACTGGAGACTTTGTGCCCTGGTGTTGTGTCTTGTGCTGACATTGTAGCCGTTGCTGCAAGGGATTCTGTTGTTGCTCTTGGTGGGGTTGGCTGGGTAGTAAGCTTGGGAAGAAGAGACTCAACCACTGCAAGTTTAAGTGAAGCTAACTCAGATTTACCGGCTCCGTTTTTGGATCTCAATGCCCTAATCGCTGCTTTCTATAAAAAGGGATTCTCAGCCGATGAGATGGTTGCTTTATCAGGTGCTCACACAATAGGCAGAGCCAGGTGCTCATTATTCCGAACAAGGATTTATAACGAAAGCAACATAGATCCCTCGTATGCAAAGTTAATGAGAGCATATTGTCCCTTGGTAGGTGGTGATAATAACTTATCTCCTTTAGACATCACCACTGGAGATACTTTCGACAATACTTATTACAAGGATTTAATGTACAAAGAGGGTCTTCTCCACTCTGATCAACAGCTATATAACGGTGGTATCACGAATTCTAAGGTTCTACAGTATGCCACGAAACCATTGCTCTTCCAATTAGATTTTGGTAACGCCATGATCAAGATGGGTAACCTTAGCCCACTAACCGGTAACCAGGGTCAAATTAGAAGAGTATGCAGCAGGGTGAATTGA 825 0.4303 MVTATVLNEPRMGASLLRLHFHDCFVQGCDGSVLLENNAIFTGEQSALPNLNSLRGFDVIENIKAKLETLCPGVVSCADIVAVAARDSVVALGGVGWVVSLGRRDSTTASLSEANSDLPAPFLDLNALIAAFYKKGFSADEMVALSGAHTIGRARCSLFRTRIYNESNIDPSYAKLMRAYCPLVGGDNNLSPLDITTGDTFDNTYYKDLMYKEGLLHSDQQLYNGGITNSKVLQYATKPLLFQLDFGNAMIKMGNLSPLTGNQGQIRRVCSRVN* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0829 274 ProSitePatterns Peroxidases proximal heme-ligand signature. 141 151 IPR019793 -
Apr10g0829 274 PRINTS Haem peroxidase superfamily signature 13 27 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Haem peroxidase superfamily signature 75 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Haem peroxidase superfamily signature 93 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Haem peroxidase superfamily signature 141 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 SUPERFAMILY Heme-dependent peroxidases 2 274 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PANTHER PEROXIDASE 72-RELATED 2 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 CDD secretory_peroxidase 2 273 IPR033905 GO:0004601|GO:0042744
Apr10g0829 274 Gene3D Peroxidase, domain 2 119 253 - -
Apr10g0829 274 PRINTS Plant peroxidase signature 15 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Plant peroxidase signature 55 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Plant peroxidase signature 74 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Plant peroxidase signature 93 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Plant peroxidase signature 140 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Plant peroxidase signature 192 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Plant peroxidase signature 208 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PRINTS Plant peroxidase signature 248 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 Gene3D - 2 271 - -
Apr10g0829 274 ProSiteProfiles Plant heme peroxidase family profile. 1 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr10g0829 274 PANTHER PEROXIDASE 2 274 - -
Apr10g0829 274 ProSitePatterns Peroxidases active site signature. 13 24 IPR019794 GO:0004601
Apr10g0829 274 Pfam Peroxidase 2 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0829 Apr-Chr10 20534266 20536497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0829 2 274 Peroxidase AT5G05340 59.636 2.05e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0829 K00430 - gmx:100811432 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0829 10 20534266 20536497 Apr10g0829 10 20534266 20536497 ECH
Apr10g0829 10 20534266 20536497 Apr9g1478 9 24342580 24353566 ECH