Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0807 ATGGGGGGCTGTTGCAGCTGTCATATTTCGTTCGATTGCAAGGTGCATCATGTTTATGATGTTGCATGTAAACATGGTGGGGCTCGGGTCATGTTAAGAGGATCCTCTAAGTTTGTATCAATGTATAGCCAAAAGGGTACCAAAGGAGTTAATCAAGATGCATTCACAGTTTGGGAGGGCTTGATTGGAAAAAAGGACATGGTATTTTGTGGTGTGTTTGATGGTCATGGTCCTATAGGACACAAGTTTGCACGCTATGTACGTGACAATCTACCTTCAAAGCTCTCGGCATCAATCAAACAGTCACAACAAAAGGTCCTCGAAAACTATGATGCCAATGCTACAAACATAGGTAGCCATTGTGAGGATAACCAAAACATGTCCTTTGCTTCATGGGAGGGAACCTTTTTGAATTCCTTCAAGGAAATGGACGAAGACCTTGCTAGGAACATCGACACCGATGGCTTTCGTGGCGGTAGCACTGCTGTAACTATAATTAAACAGGGTGACCAATTGATAGTTGGAAATTTGGGCGATTCTCGTGCAGTTCTTTGCTCAAGATCAGATGACAACAATCTTGTTCCTGTTCAACTTACTGTTGACTTGACTCCAGATATTCCAAGTGAAGCTTCAAGAATCATTAATTCTGGTGGTAGAGTTTTTGCAGTAGCAGAAGATCCAGCAGTAAAAAGAATGTGGATGCCTACAGAGGATAGCCCTGGATTGGCTATGTCAAGAGCCTTTGGAAATTTTTGCCTAAAAACCTATGGCCTAATCTCAGTCCCTGATGTGTCTTGCAGAAAACTTACCAAGCAGGATGAATTTGTGGTTTTGGCTACTGATGGGGTATGGAGTGTGCTAACAAACAATGAAGTGATAAACATAGTTGCTTCAGCACCAAAGAGGTCCATGGCAGCAAAATTGTTAGTCAAGCATGCTGTTGAGGCTTGGAGACAAAAATGTGGTTTCAAGGTTGATGATTGTACAGTCATATGCTTGTTCCTGAAGGATTAG 1014 0.4231 MGGCCSCHISFDCKVHHVYDVACKHGGARVMLRGSSKFVSMYSQKGTKGVNQDAFTVWEGLIGKKDMVFCGVFDGHGPIGHKFARYVRDNLPSKLSASIKQSQQKVLENYDANATNIGSHCEDNQNMSFASWEGTFLNSFKEMDEDLARNIDTDGFRGGSTAVTIIKQGDQLIVGNLGDSRAVLCSRSDDNNLVPVQLTVDLTPDIPSEASRIINSGGRVFAVAEDPAVKRMWMPTEDSPGLAMSRAFGNFCLKTYGLISVPDVSCRKLTKQDEFVVLATDGVWSVLTNNEVINIVASAPKRSMAAKLLVKHAVEAWRQKCGFKVDDCTVICLFLKD* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0807 337 PANTHER ALPHABET, ISOFORM E-RELATED 1 337 - -
Apr10g0807 337 Gene3D - 32 337 IPR036457 -
Apr10g0807 337 SMART PP2C_4 29 333 IPR001932 -
Apr10g0807 337 Pfam Protein phosphatase 2C 64 315 IPR001932 -
Apr10g0807 337 ProSiteProfiles PPM-type phosphatase domain profile. 38 335 IPR001932 -
Apr10g0807 337 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 337 - -
Apr10g0807 337 CDD PP2Cc 38 335 IPR001932 -
Apr10g0807 337 SUPERFAMILY PP2C-like 34 336 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0807 Apr-Chr10 20084713 20087415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0807 27 335 PP2C-type Phosphatase Gene Family AT5G01700 51.613 1.74e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0807 - - vun:114165448 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0807 10 20084713 20087415 Apr10g0807 10 20084713 20087415 ECH
Apr4g2093 4 29795193 29797814 Apr10g0807 10 20084713 20087415 PCT