Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0797 ATGGGAAATAATGGATGTCATGTCAAAGATTTCAACACAAATCCACTTCAGCTTTTGTTCTCTTCAAATGGTGATGAAAGGAAGGAATGGAGGAGTAATCACAAAGGTGGTTTCATTTGCTTAGCCTTTTTACTCTTTCTTTTGCAAGCTTTGGCTTCCACCATTCAACCTGTTTCAGGCCACTTGTGGGATGGAGTGGTTGTTACTCAAGCTGATTACCAATCTCTGAGGGCTATTAAGCATGAGCTGATTGACTTCAAAGGGGTTCTGAGGAGTTGGAATGATAGTGGTTTAGGTGCTTGTTCAGGTGGGTGGGCAGGAATCAAGTGTGTGAATGGAGAGGTTATAGCAATTCAGCTTCCTTGGAGAGGGTTAGGTGGCCGCATTTCTGAGAAAATTGGCCAACTTCAAGCTCTTAGGAAGCTTAGTCTCCATGACAATGCTATTGCTGGTCCTGTCCCTTGGTCACTTGGCTTTCTTCCTAACCTCAGAGGAGTTTATCTCTTCAATAACAGGCTTTCAGGTTCTATTCCTCCTTCCCTTGGCAATTGTCCAATGCTTCAGTCCTTTGATGTTAGCAATAATTTCCTCACTGGTAAAATCCCTCCTAGTTTAGCTAACTCCACTAGGATATTTAGGATCAATTTGAGCTTCAACTCACTTTCTGGATCCATTCCTAGCAGTTTCACCATGTCTTCTTCTCTAACCATTCTTGCCCTTCAACACAACAATCTCTCTGGTTCTATTCCAGATTCTTGGGGTGGAATGGGAAAGAAAAATTCTGCTCAACTTCAAGTTTTGACCCTTGATCACAATCTCATTTCTGGAAAAATTCCAGTTTCTCTAAGCAAGCTAGCTTTACTTGAAAACGTTTCTTTGAGTCATAACCAGATTGTTGGGCATATTCCAAGCGAACTAGGTGCACTTTCCAGGCTTCAAGTTCTTGATCTATCAAACAATGCCATCAATGGCCAAATCCCATCTACAATTGGGAACATCTCAAGCATTAGCCAAATTGATTTCTCTGAAAATAAATTAGATGGAGAAATTCCAGATTCCCTCACCAAACTTGCTAATCTCAGTTCATTCAATGTCTCTTACAACAATCTATCTGGTCTTGTCCCATCTATACTTTCCAAAAAATTCAGTGCTAGCTCTTTTGCAGGGAATTTTGAGCTATGTGGGTACATCAGTTCAAAGCCATGCCCTTCACCCCCACCACATAATCTTCCAGCTCAATCACCACAGCCTCCTTCCAAGCCAAGTCACCATAAATTAAGCACCAAGGACATAATCCTCATAGTAGCAGGTGTTCTCTTGCTAATTTTGTTACTACTATGCTGCTTTTTGCTATGTTGTTTGATCAGGAAAAGAGCTGCTTCAAGCCGAAAGAGTGGCAAGACTGCTAAGGCTGCAGCATCTGCTAGGAGTGTTGAGAAAGGTGCCTCAGCTGGTGGTGAAGTTGCTGAATCAGGAGGTGAAGCTGGTGGAAAGCTAGTTCACTTTGATGGGCCCTTTGTGTTTACTGCTGATGATCTTTTGTGCGCAACTGCGGAGATAATGGGAAAAAGTGCATATGGAACTGCATACAAGGCAACACTGGAGGATGGGAACCAGGTTGCTGTGAAAAGGCTGAGGGAGAAGACTACTAAAGGGCAGAAGGAGTTTGAAACTGAGGTTGCTGCACTTGGCAAAATCAGACACCCAAATCTCTTAGCCCTTAGAGCCTACTATTTAGGACCAAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGACCAAAGGAAGCCTAGCATCATTCCTTCATGCTCGTGGGCCTGAAATTGTAATTGAATGGCCAACAAGGATGAAAATTGCAATTGGAGTCACCCATGGTCTGTGCTACCTCCATAACCAAGAGAACATTGTACATGGAAATCTTACATCTAGCAATATACTATTGGATGAGCAAACAAATGCCCATATAACAGATTTTGGTCTTTCAAGGCTAATGACAACTTCTGCCAACACCAACATCATTGCAACTGCAGGAAGCCTTGGCTACAATGCACCAGAGCTTTCAAAGGCTAAGAAGCCTAACACAAAGACTGATGTTTATAGTCTTGGTGTCATCATGTTGGAGCTGCTAACTGGTAAACCACCTGGTGAGCCAACCAATGGGATGGACTTGCCTCAGTGGGTGGCATCCATAGTGAAGGAAGAGTGGACCAATGAAGTGTTTGATTTGGAACTCATGAGAGATGCACCAACCATAGGGGATGAGTTGCTTAATACATTGAAGTTAGCTTTGCATTGTGTGGATCCATCTCCAGCTGCTAGGCCAGAAGTTCAGCAAGTTCTCCAGCAGTTGGAGGAGATTAAACCAGACTTAGCTGCAGGGGATGATGATGGAACTAAGGTCCAAACAACTGAATAA 2415 0.4302 MGNNGCHVKDFNTNPLQLLFSSNGDERKEWRSNHKGGFICLAFLLFLLQALASTIQPVSGHLWDGVVVTQADYQSLRAIKHELIDFKGVLRSWNDSGLGACSGGWAGIKCVNGEVIAIQLPWRGLGGRISEKIGQLQALRKLSLHDNAIAGPVPWSLGFLPNLRGVYLFNNRLSGSIPPSLGNCPMLQSFDVSNNFLTGKIPPSLANSTRIFRINLSFNSLSGSIPSSFTMSSSLTILALQHNNLSGSIPDSWGGMGKKNSAQLQVLTLDHNLISGKIPVSLSKLALLENVSLSHNQIVGHIPSELGALSRLQVLDLSNNAINGQIPSTIGNISSISQIDFSENKLDGEIPDSLTKLANLSSFNVSYNNLSGLVPSILSKKFSASSFAGNFELCGYISSKPCPSPPPHNLPAQSPQPPSKPSHHKLSTKDIILIVAGVLLLILLLLCCFLLCCLIRKRAASSRKSGKTAKAAASARSVEKGASAGGEVAESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIEWPTRMKIAIGVTHGLCYLHNQENIVHGNLTSSNILLDEQTNAHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKAKKPNTKTDVYSLGVIMLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVQQVLQQLEEIKPDLAAGDDDGTKVQTTE* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0797 804 ProSiteProfiles Protein kinase domain profile. 515 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0797 804 Gene3D Ribonuclease Inhibitor 186 257 IPR032675 -
Apr10g0797 804 Gene3D Ribonuclease Inhibitor 71 185 IPR032675 -
Apr10g0797 804 Gene3D Ribonuclease Inhibitor 258 403 IPR032675 -
Apr10g0797 804 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 314 794 - -
Apr10g0797 804 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 32 328 - -
Apr10g0797 804 SMART LRR_typ_2 160 184 IPR003591 -
Apr10g0797 804 SMART LRR_typ_2 357 380 IPR003591 -
Apr10g0797 804 SMART LRR_typ_2 309 333 IPR003591 -
Apr10g0797 804 Pfam Leucine rich repeat 310 370 IPR001611 GO:0005515
Apr10g0797 804 Gene3D Transferase(Phosphotransferase) domain 1 593 799 - -
Apr10g0797 804 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 32 328 - -
Apr10g0797 804 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 314 794 - -
Apr10g0797 804 CDD STKc_IRAK 521 786 - -
Apr10g0797 804 SUPERFAMILY Protein kinase-like (PK-like) 519 788 IPR011009 -
Apr10g0797 804 SUPERFAMILY L domain-like 119 376 - -
Apr10g0797 804 Gene3D Phosphorylase Kinase; domain 1 521 592 - -
Apr10g0797 804 Pfam Protein tyrosine and serine/threonine kinase 519 783 IPR001245 GO:0004672|GO:0006468
Apr10g0797 804 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515
Apr10g0797 804 Pfam Leucine rich repeat N-terminal domain 71 110 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0797 Apr-Chr10 19925436 19929111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0797 61 788 Receptor kinase-like Gene Family AT3G51740 66.410 0.0 966
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr10g0797 PK_Tyr_Ser-Thr 4.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0797 - - gmx:100799290 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0797 10 19925436 19929111 Apr10g0797 10 19925436 19929111 ECH