Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0793 ATGGTCGTGATCATGATAAGTGAAAAGAGACGATGTTGGCCTTCTGGAGATGTGGCGCGTAAAGGAATTGTTACAACATCAAACTGGGAAATGCAGTCCTTACGGAGCTCTGGTATAAATAAGAGAATTTCAGTGCAGCCGTTGAACTTGTTTGGAGTACTGGTCAAGAAGAAAAAACTTGTCAATAAAATTTTTGCCAAGGGTGTAGCAGTAAAGGAAACATCAAACAATGCTCCTAGGATAAAGTACGATGTTTTTGTTAGCTTTAGAGGAAAGGACATCCGCGACAATTTTCTTAGCCATTTGATTGAGGCTTTCCCTCGGAAGCAAATATATGCCTTTGTTGATGATAAACTTGAGAGAGGAGATGAAATATCACTATCACTTCTGGAAGCAATTGAAGGATCATTCATTTCATTGATCATATTCTCTGAAGACTATGCTTCTTCACGCTGGTGTTTGGAAGAACTTGTGAAAATAGTTGAGTGCAGGGAAAAGTATGGACAGATTATTATACCAGTGTTCTACAATATAGATCCCACAAATGTTCGGCATCAAAAGGGGAGTTATGAAAATGCACTGGCTGAACATGAAAAAAAGTACGGTTTGTCCAAGGTGCAAATGTGGAGACATGCTCTAACCAATTCTGCTAATTTATCAGGAATTAATTCAACAACTTTTCGGAATGATGCTGAGCTGCTCGAAGATATTATCAATCATGTGTTGAAAAGGTTGAGTAACCAACCATATAACTCAAAGGGTCTTATTGGAACTGGCAAACCAATTGCACATTTAGAATCTTTGTTATGTCAAGATTCGAAAGATGTTCGTGTTATTGGAATTTGGGGTATGGGCGGTATCGGCAAGACAACTATTGCAGAAGAATTGTTTAACAAAATGTGTTTTGAATTTGAAGGATGTTGTTTTTTAGCAAAGGTAAGGGAAGAATCAGAAAGGTATAGCTTAATTTATTTACAAAAAAAACTTTTCTCTACACTGTTAGCAGAAGAAGTGAAAATTGAGTCGTTCAACTATATCAAGAGAAGGATAAGTCGCATGAAGGTTCTTATTGTTCTTGATGACGTGAACGATTCTGATCAAATAGAAAAATTATTTGGAAGTCTTGATTGGTTTGGATCAGGGAGTAGAATAATAATAACAACTAGAGATAAGCAAGTGCTCAACAAAGTTGATGATATATACGAGGTTGGCATCTTGAGTTCTAGTGAAGCACTTGAACTTTTCAATTTAAATGCCTTTAGCCAAAATCATCTTGAAATGGAGTATTATGAGCTCTCAAAGAGAGTTATCAATTACGCCAAAGGCATTCCCTTAGTTCTTAAAGTTTTAGGCAATCTTCTTCGTGGAAAGGATAAGGAAGTATGGGAAAGTCAGCTAGACAAACTTAAAAAGATGCCAAGTAAAAAAGTTCATGATATAATGAAACTAAGTTATGATGATCTAGATCGCAAAGAGCAAAAGATTTTCTTAGATCTTGCATATTATGAAAGTGATAATTCAGTAGTTATTGGGTTAGAAAGACTGAAAGATAAAGCTCTTATAACTATTTCTAAGGATAATATTGTATCCATGCATGATATTGTCCAAGAAATGGGTTGGGAGATTGTTCGTCAAGAGTCTAGTGAAGATCTTGGAAGCTGTAGCCGATTATGGGATCCTGATGACATTTATGAAGTTCTGAAAAATGACAAGGGAACAAGGGCCATTAGAAGCATAAAGACACACTTGTCAACAATTAAAAAGCTGACATTAAGCCCTCACATATTTGCTAAGATGAGCCAACTGCAATTTTTGGATTTGCACAGCAGCGAATATGATCAAGACTGCTTGGATCTTCTTCCTCAAGGGTTTCAATATTTGTCAAGTGATATAAGATATCTTCATTGGATGCATTACCCTCTGAAATCCCTGCCAGATAAATTTTCTGCAAAAAATCTCGTTGTATTGGATATGTCATATAGCCAAGTGGAAAAGCTTTGGGATGGAGTGCAGAATCTGGTGAACTTAAAAGAAGTTAAACTCAATAATTGCAAATTCCTGAAGGAGCTACCAAACTTTACAGAGGCCGCTAATCTTGAAATACTGGATCTCAGTTGTTGTGGTGAGTTGACTAGTGTGAATCCCTCTATTTTCTCTCTCAACAAGCTTCAGAAATTGGACTTAAGTCTTTGTTTTTCCCTTACCAAACTTACAAGTGATACCCATTTAACCTCCCTCCGTTATCTTAATCTTGAATACTGTGAAAAACTACAAGAATTCTCAGTAACATCAGAGAATATGATAGAACTACGTTTTGTTGGCATTCACATCAATGCATTGCCTTCATCTTTTGAACGTCAAAGCAAGCTAGAAGTCCTAGTTTTAGGAGCTAGTGAGATTGAGAGCTTGCCTTCATGTATAAAAAATTTTACTAGACTGCGATATCTAGACCTAAGGTATTGCTCAATGCTTCAGACTCTACCAGAGCTTCCCCCATCCCTTGAAACTCTGCTTGCTGAAAGGTGCAGATCACTGAAGACAGTATTGTTCCCTTCAACAGCAGTTGATCAATTGAAAGAAAACAGAAGAAAGATAGAGTTCTGGAATTGCTTGTACTTGGATAAACATTCTCTCCTGGCTATTGGGTTGAATGTGCAAATCAATGTGATGAAATTTGCATATCAACATTTACCCTCACCAGAACTTGATTATGCAGAAAATTATGATGATTACAAAGATAAGTATGATTCTTATCAAGCAAAGTACGTGTATCCAGGAAGCAGGGTTCCAGAGTGGTTGGAATATAAGACAACAAAGGATTATATATTAATTGATCTCTCTTCTGCTCAACTTCTGCCTCAGTTGGGTTTCATCTTCTGTTTCATTGTTTCTGAAGACTCGGAATATGGTGAGAAATTGGAATTTGACATTACTATAAGTGATGCTGAGAGTGACGGTAAAAAGGACAGCGTTAGTATGTACATGACAAGGTCATTTTTCAGAATTGCATCAGATCATGTGTGTGTGATGTATGACCAACGATGTTCTCACTACCTAAATAGCAAGGCCAAAACCATGACAAGGCTTAAAATCAAGGTTGCAGCAAGGGCAGAACCCAATGATTTAAGACATGAGCCCGAGGTGGTGTTAAAAGGGTTTGGAGTCAGCCCAATAAACACCTCAACATATCACAGTTTTGTTCAGCAAGTGGAATTCATTGATTATATGAACAAATGGAACCGGGTGGTGCTTATTATCATCCTATGTATTTCCTTTATGAAGTTAAAGATAAATAATTTGATCTAG 3306 0.3687 MVVIMISEKRRCWPSGDVARKGIVTTSNWEMQSLRSSGINKRISVQPLNLFGVLVKKKKLVNKIFAKGVAVKETSNNAPRIKYDVFVSFRGKDIRDNFLSHLIEAFPRKQIYAFVDDKLERGDEISLSLLEAIEGSFISLIIFSEDYASSRWCLEELVKIVECREKYGQIIIPVFYNIDPTNVRHQKGSYENALAEHEKKYGLSKVQMWRHALTNSANLSGINSTTFRNDAELLEDIINHVLKRLSNQPYNSKGLIGTGKPIAHLESLLCQDSKDVRVIGIWGMGGIGKTTIAEELFNKMCFEFEGCCFLAKVREESERYSLIYLQKKLFSTLLAEEVKIESFNYIKRRISRMKVLIVLDDVNDSDQIEKLFGSLDWFGSGSRIIITTRDKQVLNKVDDIYEVGILSSSEALELFNLNAFSQNHLEMEYYELSKRVINYAKGIPLVLKVLGNLLRGKDKEVWESQLDKLKKMPSKKVHDIMKLSYDDLDRKEQKIFLDLAYYESDNSVVIGLERLKDKALITISKDNIVSMHDIVQEMGWEIVRQESSEDLGSCSRLWDPDDIYEVLKNDKGTRAIRSIKTHLSTIKKLTLSPHIFAKMSQLQFLDLHSSEYDQDCLDLLPQGFQYLSSDIRYLHWMHYPLKSLPDKFSAKNLVVLDMSYSQVEKLWDGVQNLVNLKEVKLNNCKFLKELPNFTEAANLEILDLSCCGELTSVNPSIFSLNKLQKLDLSLCFSLTKLTSDTHLTSLRYLNLEYCEKLQEFSVTSENMIELRFVGIHINALPSSFERQSKLEVLVLGASEIESLPSCIKNFTRLRYLDLRYCSMLQTLPELPPSLETLLAERCRSLKTVLFPSTAVDQLKENRRKIEFWNCLYLDKHSLLAIGLNVQINVMKFAYQHLPSPELDYAENYDDYKDKYDSYQAKYVYPGSRVPEWLEYKTTKDYILIDLSSAQLLPQLGFIFCFIVSEDSEYGEKLEFDITISDAESDGKKDSVSMYMTRSFFRIASDHVCVMYDQRCSHYLNSKAKTMTRLKIKVAARAEPNDLRHEPEVVLKGFGVSPINTSTYHSFVQQVEFIDYMNKWNRVVLIIILCISFMKLKINNLI* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0793 1101 PRINTS Disease resistance protein signature 278 293 - -
Apr10g0793 1101 PRINTS Disease resistance protein signature 349 363 - -
Apr10g0793 1101 PRINTS Disease resistance protein signature 440 454 - -
Apr10g0793 1101 PRINTS Disease resistance protein signature 718 734 - -
Apr10g0793 1101 Gene3D - 80 241 IPR035897 -
Apr10g0793 1101 Gene3D Ribonuclease Inhibitor 568 764 IPR032675 -
Apr10g0793 1101 Gene3D - 405 489 IPR042197 -
Apr10g0793 1101 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 78 1076 - -
Apr10g0793 1101 Pfam Leucine Rich Repeat 652 671 IPR011713 -
Apr10g0793 1101 SUPERFAMILY "Winged helix" DNA-binding domain 475 568 IPR036390 -
Apr10g0793 1101 SUPERFAMILY L domain-like 581 872 - -
Apr10g0793 1101 SMART till_3 82 219 IPR000157 GO:0007165
Apr10g0793 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 499 IPR027417 -
Apr10g0793 1101 Pfam NB-ARC domain 267 487 IPR002182 GO:0043531
Apr10g0793 1101 Gene3D Ribonuclease Inhibitor 765 864 IPR032675 -
Apr10g0793 1101 Gene3D - 242 403 IPR027417 -
Apr10g0793 1101 ProSiteProfiles TIR domain profile. 81 245 IPR000157 GO:0007165
Apr10g0793 1101 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 78 1076 IPR044974 GO:0006952
Apr10g0793 1101 SUPERFAMILY Toll/Interleukin receptor TIR domain 79 221 IPR035897 -
Apr10g0793 1101 Pfam TIR domain 82 250 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0793 Apr-Chr10 19790499 19802187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0793 75 829 WRKY Transcription Factor Family AT4G12020 33.375 4.78e-102 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0793 - - aprc:113850949 2129.37