Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0792 ATGCCGGATACAAAATTCATTGCACACAAGAGACAATTTTGGGCTTCTGCAAATGATCATCAGTTATTGCCTGAAAGAATTGCTGCTAGAGCATCTAAACTGGAAATGCGATCCTTATGGAACTCTGGCATAAATAATGTATGTGTGAGATGTAGAATTTCAAAGCCACCATTGAACTTGTTCGCTACTGTAGGAATTAAAAAGAGAGAAACTGTAAATAAAATCGTGGCAAAGGTGATTGGGGTAGCAGCAAAGTCAACATCTAACAATGCTCCTCAAATAAAGTATGATGTTTTCGTTAGCTTTAGGGGCAAGGAAATCTACCATGGCTTTCTTAGCCTTTTGATTGACGCTTTTTGTCAAAAGCAAATAAATGCCTTTGTAGATGATACAGTTGAGAGGGGAGAACATATATCACCGTCACTTCTTGAAGCAATTGAAGGATCATCCATTTCATTGATCATATTCTCAGAAGACTATGCTTCTTCGTCCACATGTTTGGAAGAACTTGTGAAAATAATTGAGTGCAAAGAGAAATATGGACAAACTGTGGTACCTATTTTTTACCAAGTAGACCCCAAAGACGTAGAGCATCAAAAAAAGAGTTATGAAAATGCATTTGCTGAACATGAAAAAATGTACAATATGTCCAGGGTTCAAATATGGAGACATGCTTTGAACGAATCTACTGATTTATCTGGAATTAAGTCATCAGATTTTCAGAATGACGCTGAGCTACTTGAAGAAATCGTTAATCTATTGTTGTTGAGGTTGAATAAGCACCCAATCAATTCAAAAGGACTTGTTGGAATTTGCAAACCAATTGCACACTTAGAATCATTGTTATGCCAAGAGTCAAAAGATGTTCGAATTATTGGAATTTGGGGAGTGGGCGGTATTGGCAAGACAACTATTGTTGAAGAAGTATTTAACCAACAATGTTCTAATTATGAAGGTTGTTGTTTCCTTGCAAAGGTACGGGAAGAATTGGGAAGACATGGAACAATTTCTCTTATGGAAAGACTTTTTTCTGCATTATTGGCAGAAGATGTGAAGATTAACACTCAAAATGAATTGTTAAATTATAAGAAAAGGATTGGGTGTATGAAGGTTCTTATTGTTCTTGATGATGTGAATGATACAAATCTATTAAAAATATTATTTGGAAAAGTTGATTGGTTTGGAGCAGGTAGTAGAGTAATTATAACAACTAGAGATCAGCAAGTACTTTCCACTATCAAAGTGGATGATATATATGAGGTTGGGCTATTGAGCTACAGTGAAGCACTTCAGCTTTTCAATTTTAATGCCTTTAACCAAAGTCATTTTGAAATGGAGTATTATGAGTTATTGAAGGAGGTGGTTAATTATGTGAAAGGCATTCCATTAGTTCTTAAGGTTTTGGGTAGTCTCTTTCGTGGGAAAGATAAGAAAGCATGGAAAATTTATCTAGACAAACTGGAAAACATGCCAAGTAAAAAAGTTCATGATGTATTGAGACTATGCTATGATGACCTAAATCACGAAGAGCAAGTGATATTTTTAGATCTTGCATGTTTCTTTGTTGGACTGGATTTGGATTTGGTTTCCATAATAACTTTATCAAATGATCATGACAATGATAACTCAATAGCTGTTGGGTTAGTAAGTTTGCTAGATAAAGCTCTTATTACTATTTCAGAAGATAAGGTTATATCAATGCATGATTCTGTACAAGAAATGGGTTGGGAAATTGTTCGCCAAGAATCTAGTGAAGACCCTGGAAGCTGCAGTCGATTGTGGGATCCTGATGACATTTATGAAGTTTTGAATAATAACAAGGGAAATGAGGCCATTAAAAGCATGAGGATAGACTTGTCAGCAGTTAGAAAGTTGAAGTTAAATCCAACTGTATTTGAGAAGATGACTAATCTCCAATTTTTAGATTTTCATGGAGAATATGATCAAGATTGGTTGGATATTTTTCCTCAAGGGCTTCAATCTTTGTCAAATAATCTACGATATCTAAATTGGACGCATTATCCTCTGAAATCCCTGCCAGAGAATTTTTCTGCCAAAAATCTTGTTATATTGGACTTATCTTATAGTAAAGTGGAAAAGCTTTGGAATGGAGTGCAGAATCTAGAGAATTTGAAAATTGTTAAACTCTGCAATTGTGAATTCCTCAAGGAGCTGCCAGATTTTTCAAAAGCAACAAATCTTGAAGTACTGAATTGCAGTTGGTGTGTTCAATTGACTAGTGTACATCCCTCAATTTTCTCTCTCAACAAGCTTGAATTCTCAGTGACATCAGAGAACATGATGGAACTACGTTTAACAGGTACAAGCATCAATGCATTGCCCTCATCTCTTGGACTCCAAAGCAAGATGGAAACCTTAGTTGTAGGTTATAGTGACATTCAAAGCTTACCTTCATGCATTAAGGATCTTACAAGACTGCGATATCTAGATCTAAGACGTTGTTACGAGCTTCAAACTCTACCAGAGCTTCCCCCATCCATTGAAATCCTACTTGTTGAAGAATGCACATCATTGAAGACTGTATTGTTCCCTTCAACACCTACTGAACGATTTAACGAAAATAGGAAAAGGGCTGAGTTTTGGAATTGCTTTAACTTGGATGAAGCTTCTCTCATTGCTATTGGGTTAAGTGCATCTAGAAACATAAGGAAATTTGCTTGCCTGCATATATTCCCATCAAAACATGATCACGATAATTACAGTGATTATAATCAATCAATGTATGTGTATCCGGGAAGCAATGTTCCAGAGTGGTTAGAGTATAAGACAAAAAACGATTATATAGTTATTGATCTCCCTGCTGCTCAAATTCCATCTATGTTGGGCTTCATTTTCTGCTTCATCATTGGCAAGGACTCAGAATATGGTGAGATATTGATAATAGATGTCACAGTTAGTGATGGTGATGGTGAAGGTAAAAAGGAAAATTTTGAAATGCACATGACAAGGCCATGTGCCAAAATTGCATTAGATCATGTGTGTGTGATGTACAATCAACAATTTTCTGACTACCTATTGAGCAGAGCCGAATATCAGAAAAGGTTTCAAATAAAGGTTACAACAAGGATGAAATCCAGTGAATCCAGATATAGACCAGAGGTGGCAATAAAAGGGATTGGAGTAAGCAAAATAAACGGCTCCACATATTTGAATTTCATTCGAATAAGAGAATTGATTTATATTGAAAACAACTGGGATTCCCTTATGCTTAGCATCTTCTTATGTATTTCTGTCCTTCAATTGAAGATGAAAAATTTGATTTAG 3285 0.3565 MPDTKFIAHKRQFWASANDHQLLPERIAARASKLEMRSLWNSGINNVCVRCRISKPPLNLFATVGIKKRETVNKIVAKVIGVAAKSTSNNAPQIKYDVFVSFRGKEIYHGFLSLLIDAFCQKQINAFVDDTVERGEHISPSLLEAIEGSSISLIIFSEDYASSSTCLEELVKIIECKEKYGQTVVPIFYQVDPKDVEHQKKSYENAFAEHEKMYNMSRVQIWRHALNESTDLSGIKSSDFQNDAELLEEIVNLLLLRLNKHPINSKGLVGICKPIAHLESLLCQESKDVRIIGIWGVGGIGKTTIVEEVFNQQCSNYEGCCFLAKVREELGRHGTISLMERLFSALLAEDVKINTQNELLNYKKRIGCMKVLIVLDDVNDTNLLKILFGKVDWFGAGSRVIITTRDQQVLSTIKVDDIYEVGLLSYSEALQLFNFNAFNQSHFEMEYYELLKEVVNYVKGIPLVLKVLGSLFRGKDKKAWKIYLDKLENMPSKKVHDVLRLCYDDLNHEEQVIFLDLACFFVGLDLDLVSIITLSNDHDNDNSIAVGLVSLLDKALITISEDKVISMHDSVQEMGWEIVRQESSEDPGSCSRLWDPDDIYEVLNNNKGNEAIKSMRIDLSAVRKLKLNPTVFEKMTNLQFLDFHGEYDQDWLDIFPQGLQSLSNNLRYLNWTHYPLKSLPENFSAKNLVILDLSYSKVEKLWNGVQNLENLKIVKLCNCEFLKELPDFSKATNLEVLNCSWCVQLTSVHPSIFSLNKLEFSVTSENMMELRLTGTSINALPSSLGLQSKMETLVVGYSDIQSLPSCIKDLTRLRYLDLRRCYELQTLPELPPSIEILLVEECTSLKTVLFPSTPTERFNENRKRAEFWNCFNLDEASLIAIGLSASRNIRKFACLHIFPSKHDHDNYSDYNQSMYVYPGSNVPEWLEYKTKNDYIVIDLPAAQIPSMLGFIFCFIIGKDSEYGEILIIDVTVSDGDGEGKKENFEMHMTRPCAKIALDHVCVMYNQQFSDYLLSRAEYQKRFQIKVTTRMKSSESRYRPEVAIKGIGVSKINGSTYLNFIRIRELIYIENNWDSLMLSIFLCISVLQLKMKNLI* 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0792 1094 Pfam Leucine Rich Repeat 687 706 IPR011713 -
Apr10g0792 1094 Gene3D - 93 258 IPR035897 -
Apr10g0792 1094 PRINTS Disease resistance protein signature 291 306 - -
Apr10g0792 1094 PRINTS Disease resistance protein signature 365 379 - -
Apr10g0792 1094 PRINTS Disease resistance protein signature 458 472 - -
Apr10g0792 1094 PRINTS Disease resistance protein signature 808 824 - -
Apr10g0792 1094 ProSiteProfiles TIR domain profile. 94 258 IPR000157 GO:0007165
Apr10g0792 1094 Pfam NB-ARC domain 281 493 IPR002182 GO:0043531
Apr10g0792 1094 SUPERFAMILY L domain-like 583 874 - -
Apr10g0792 1094 Gene3D - 259 418 IPR027417 -
Apr10g0792 1094 Gene3D - 424 507 IPR042197 -
Apr10g0792 1094 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 257 517 IPR027417 -
Apr10g0792 1094 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 761 1064 - -
Apr10g0792 1094 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 91 759 - -
Apr10g0792 1094 SUPERFAMILY Toll/Interleukin receptor TIR domain 91 234 IPR035897 -
Apr10g0792 1094 SMART till_3 95 232 IPR000157 GO:0007165
Apr10g0792 1094 Pfam C-JID domain 917 1020 IPR045344 -
Apr10g0792 1094 Pfam TIR domain 95 259 IPR000157 GO:0007165
Apr10g0792 1094 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 761 1064 IPR044974 GO:0006952
Apr10g0792 1094 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 91 759 IPR044974 GO:0006952
Apr10g0792 1094 Gene3D Ribonuclease Inhibitor 601 927 IPR032675 -
Apr10g0792 1094 SUPERFAMILY "Winged helix" DNA-binding domain 493 603 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0792 Apr-Chr10 19772454 19778950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0792 96 829 WRKY Transcription Factor Family AT4G12020 31.465 2.04e-93 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0792 - - aprc:113850948 2146.32