Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0791 ATGTCAAACAATCCTCAAATAGAGTATGATGTTTTTGTTAGCTTCAGGGGCAAGGATATCCGCCAAGGTTTTCTTAGCCATTTGATTGAGGCTTTTCCTCGGAAGCAAATAACTGCCTTTGTTGATGATAAACTTAGAAGAGGAGATGATATATCGCCATCACTTCTTGGAGCAATTGAAGGATCATTCATTTCATTAATCATATTCTCTGAAGACTATGCTTCTTCACATTGGTGTTTGGAAGAACTTGTAAAAATAGTTGAATGCAAAGAGAAAAAAGGACAGATTGTAATACCTGTTTTCTACCATGTCGATCCCACCGATGTACGACATCAAAAGAAGAGTTTTGGAAATGCACTACATGAACATGAAAAAAAGTATAATTTGTCCAAGGTGCAAATGTGGAGAGATGCTTTGAACAAATCTGCTAATTTATCAGGGATCAAATCATCTGATTTTCGGAATGATGCTGAGTTGCTTGAAGAAATTGTCAATCTTGTGTTGATGAGGTTGAGTAAGCACCCAGTTAATTCAAAGGGACTTATTGGAATTGACAAATCAATTGCACATTTGGAATCATTATTATGTGAAGAGTCAAAAGCCGTCCGTGTTATTGGAATTTGGGGTATGGGCGGCATCGGTAAGACAACCATTGCAGAAGAATTATTTAACAAACTATGTTTTAAATATGAAGGGTGCTGTTTTTTGGCAAATGTGAGAGAAGAATCAAGAAGACATGGGATACTTTCTTTAAAAGAAAAACTTTTTTCTGCATTATTAGTAGAAGATGTACAAATTAACACACCAAATGGATTGTCCAGTGATATTGGAAGAAGGATTGGTCGTAAGAAGGTTCTTATTATTCTTGATGATGTTGATGATCCGGATCAAGTAGAAAAATTATTTGGAACCCGTGATTGCTTCAGATCAGGTAGTAGAATAATTGTAACGACAAGGGATAAGCAAGTACTGAATGCCAACAAAGTTGATGACATATACCAGGTTGGGGAATTAAGCTATGGTGAAGCACTTGAGCTTTTCAATTTGAATGCCTTTAATAAAAGTCATCTTGATATGGAGTATTATGAGCTATCAAAGAGGGTGGTCCATTATGCCAAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCATCTTCTCTGTGGAAAAGATAAGGTAGCATGGGAAAGTCAGTTGGACAAACTTAAAAAACTGCCAAGTAAAAAAGTTCATGATGTAATGAGACTAAGTTATGATGATCTAGATCACAGAGAGCAAAAGATTTTTTTAGATCTTGCATATCATGAAAGTGATAATTCAGTGACTATTGTGTTGGAAAGGCTAAAAGATAAAGCTCTTATAAATGTTTCTAAAGATAATTATGTGTCTATGCATGATATTATACAAGAAATGGCTTGGGAGATAGTTCGCCAAGAGTCAAGTGAAGAACCTGGAAATCGCAGTCGATTAGGGGATCCTGATGACGTTTTCCATGTATTAAAAAATGATACAGGGACTAGGGCCATCAGAAGCATAACGGCAGACTTGCCTATGATTAAGAAGTTGAAGTTAAGCTCTCATATGTTTGTTAATCTGAACAAACTTCAATTTTTCGATTTTTATTATGAATACAGTCATTACAGCACAGATCCTTTTCCTGAAGGACTTCAATATGTTCCAACTGAACTAAGATATCTTCGTTGGATAAATTGTCCTTTGAAATTCCTTGCAGAGCAATTTTCTCCTGAGAAACTTGTGATATTAGATTTGTCATGTAGCCAAGTGGAAAAGCTTTGGGATGGAGTGAAAAATCTGGAGAATTTAAAAGAAGTTATACTCAAAGGTTGTGCACTCTTAAAAGAGCTACCAGACTTTTCAAAAGCTACAAATCTCAAAGTATTGGATATTAGTTATTGTGAACAGCTGACTAGTGTACACCTTTCTATTTTCACTCTTAAAAAGCTTGAGAGTTTGAATCTAAGTGGTTGTCTTTCCCTTACCAAACTCTCAAGTGATTCCCATTTGAGCTCCCTTTGTTATCTTGACCTTCATGGCTGCCGCAAACTAAGGGAATTCTCGGTGACATCAGAGAATATGATTGAACTAAATTTGTCAAACACTTGTGTCAGTGAATTGCCTTCATCTTTTGGACATCAAAGCAAGCTTGAAATTCTACATCTAGAAAACACCAAAATTAATAGCTTGCCTTCAAGCATAAAGAATCTAACAAGACTGAGATATCTTAGTGTGCGTAGTTGTGCTAAGCTTCAAGCTTTACCAGAGCTTCCTGCATCTCTTGAAACTATAATTGCCATCAATTGCACATCACTGGAGTTCATGTTGTTCCCATTATTGTGTACTCAACAACTTCACGAAAATAGAAAAGGAGTTGAGTTTTGGGATTGCCCAAAATTGAATGAAGATTCTCTTATGGCTATTGGTTTGAATGCACAAGTCAACATAATGAATTTTGCATACCAGCATTTATCAGCACCAAAATATGAATGCATTGAAAATTACAGTGATTACAATGATCTTCATGTTTCTTATCAAGCAGTGTACATGTATCCAGGAGGCAGTGTTCCAGAGTGGTTGATTTACAAGACCACAAAGGATTATATAATTATTGATCTCTCTTCTACTCTACATTCCCCTTTATTGGGCTTCATTTTCTGCTTCATCCTCAGCAAGGACAAGCAATTATTTTTCGGCCAAAAATTGCAATTTAACATCACTGTAAGTGATGGTGACAGTGAAAGGAAAGAGGACAATGTTGAAATATACACTTCAATGCCATCTCCGATAATTGCATTAGATCATGTGTGTGTCGTATACGACCAACGATGTTCAAGCTACCTAAATAGCAGAATCAAAATCCAACCAAAGCTTTTAATCAAGGCTACAGCATTGGTGACATCTAAGTATAGCGAAGATAGTAATCCCAAAAGGGTGCTACTAAAAGGATTTGGGGTCACCCCAATAAACACCCCAATATATCGAAACTTGATTCAGCAAATGAGATTGCGTTACTGA 3030 0.3617 MSNNPQIEYDVFVSFRGKDIRQGFLSHLIEAFPRKQITAFVDDKLRRGDDISPSLLGAIEGSFISLIIFSEDYASSHWCLEELVKIVECKEKKGQIVIPVFYHVDPTDVRHQKKSFGNALHEHEKKYNLSKVQMWRDALNKSANLSGIKSSDFRNDAELLEEIVNLVLMRLSKHPVNSKGLIGIDKSIAHLESLLCEESKAVRVIGIWGMGGIGKTTIAEELFNKLCFKYEGCCFLANVREESRRHGILSLKEKLFSALLVEDVQINTPNGLSSDIGRRIGRKKVLIILDDVDDPDQVEKLFGTRDCFRSGSRIIVTTRDKQVLNANKVDDIYQVGELSYGEALELFNLNAFNKSHLDMEYYELSKRVVHYAKGIPLVLKVLGHLLCGKDKVAWESQLDKLKKLPSKKVHDVMRLSYDDLDHREQKIFLDLAYHESDNSVTIVLERLKDKALINVSKDNYVSMHDIIQEMAWEIVRQESSEEPGNRSRLGDPDDVFHVLKNDTGTRAIRSITADLPMIKKLKLSSHMFVNLNKLQFFDFYYEYSHYSTDPFPEGLQYVPTELRYLRWINCPLKFLAEQFSPEKLVILDLSCSQVEKLWDGVKNLENLKEVILKGCALLKELPDFSKATNLKVLDISYCEQLTSVHLSIFTLKKLESLNLSGCLSLTKLSSDSHLSSLCYLDLHGCRKLREFSVTSENMIELNLSNTCVSELPSSFGHQSKLEILHLENTKINSLPSSIKNLTRLRYLSVRSCAKLQALPELPASLETIIAINCTSLEFMLFPLLCTQQLHENRKGVEFWDCPKLNEDSLMAIGLNAQVNIMNFAYQHLSAPKYECIENYSDYNDLHVSYQAVYMYPGGSVPEWLIYKTTKDYIIIDLSSTLHSPLLGFIFCFILSKDKQLFFGQKLQFNITVSDGDSERKEDNVEIYTSMPSPIIALDHVCVVYDQRCSSYLNSRIKIQPKLLIKATALVTSKYSEDSNPKRVLLKGFGVTPINTPIYRNLIQQMRLRY* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0791 1009 PRINTS Disease resistance protein signature 204 219 - -
Apr10g0791 1009 PRINTS Disease resistance protein signature 279 293 - -
Apr10g0791 1009 PRINTS Disease resistance protein signature 372 386 - -
Apr10g0791 1009 PRINTS Disease resistance protein signature 625 641 - -
Apr10g0791 1009 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 9 1008 - -
Apr10g0791 1009 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 147 IPR035897 -
Apr10g0791 1009 ProSiteProfiles TIR domain profile. 7 171 IPR000157 GO:0007165
Apr10g0791 1009 Gene3D Ribonuclease Inhibitor 697 804 IPR032675 -
Apr10g0791 1009 Gene3D - 337 421 IPR042197 -
Apr10g0791 1009 Gene3D - 6 169 IPR035897 -
Apr10g0791 1009 Gene3D Ribonuclease Inhibitor 499 696 IPR032675 -
Apr10g0791 1009 Pfam TIR domain 9 172 IPR000157 GO:0007165
Apr10g0791 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 1008 IPR044974 GO:0006952
Apr10g0791 1009 Gene3D - 170 332 IPR027417 -
Apr10g0791 1009 Pfam Leucine Rich Repeat 583 602 IPR011713 -
Apr10g0791 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 431 IPR027417 -
Apr10g0791 1009 SMART till_3 8 145 IPR000157 GO:0007165
Apr10g0791 1009 Pfam NB-ARC domain 190 411 IPR002182 GO:0043531
Apr10g0791 1009 SUPERFAMILY L domain-like 513 777 - -
Apr10g0791 1009 SUPERFAMILY "Winged helix" DNA-binding domain 407 499 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0791 Apr-Chr10 19748960 19753968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0791 582 770 WRKY Transcription Factor Family AT4G12020 27.962 9.31e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0791 - - aprc:113850949 1301.19