Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0790 ATGTCTGAAGATGCTTCTTCACCTCCACCTTATGAGGTCTTTGTCAGCTTTAGGGGCCCAGATGTTCGCCACGGTTTCCTTAGCCATTTGAATGTGGCTTTTACCCAGAAAAACATTCTAGCCTTTGTGGATGATAAACTTCAAAGAGGGGATGAAATATCAGCATCACTTCTTGGAGCAATTGAAAGATCACTCATGTCATTAGTCATATTCTCAGAAAACTATGCTTTTTCTCGTTGGTGTTTAGATGAACTTGTGAAAATAATTGACTGCAAAAGGGAAAATGGACAGATTGTAGTACCTGTTTTCTACCATGTAGATCCCTCAGATGTAAGGAACCAAAGAGGTAGTTATGGAAATGCTCTCGCTGAACTTGAAGAAAAGTATAATTTGACTAAGGCACAAAGCTGGAGATCTGCTTTGGCGGAAGCTGCTAATTTATCAGGATTCCATTCATCAAACTTTAAGAATGATGCTGAACTTATTGAAGAAATCATCAAATGTGTGTTGAAGACAATGAATGATTTGCACCAAGTAAACTCAAAAGTATATGTTGGAAGTGACTCAAAAGTACTTGTTGGGATTGACAAAAGAATTGCACATCTGATATTATTATTAGACCTAGAGTCGGAAGGTGTTCGTCTTATTGGAATATGGGGTATGGGAGGTATCGGTAAGACAACCATTGCCAAAGAAGCATTTAAAAGATTGCATGCCAAATATCATGCCAGTTGTTATTTGGAAGAAGTAAGTAAAAAGGTAGAAAGAAATGAAAAAGAATCTTTGAAGCAAGAACTGTATTCTACACTATTGGAAGAGGATCTGAAAATTGAAAAAACAAATGAATTGCCCAAATATGCTAAGATAAGGCTTGGTCGTATGAAGGTTCTTATTATTCTTGATGATGTGAGACAGGTAGAACATCTACAAGAATTAGTTGGGGATCACAAATGGTTTGGATCTGGAAGTAGAATTATTGTAACAACTAGAGATAGGCATGTGCTTACTAATGAAGCTGATGATATATATGAGGTAGGGGAACTGGACTTCGATGAAGCACATAGGCTTTTCAATTTGAATGCCTTTAAAGAAAATCATATTAAAATGGAGTACAACGAGGTATCTAAGAGGATGGTAAATTATGCCAAAGGCATTCCATTAGTTCTTGAAGTTTTGGGTGGTCTTGTTCGTGGAAAAGATATAGATGTATGGAAAAGTAAACTAAGCAAACTTGAAAAGATTCTAGATAAAAAACTTCTCAATTTATTGAGACTGAGTTATGATGATTTAGATCGTGAAGAGCAAAAAAATTTTTTAGATCTTGGATATTATGAAAGTGATGATTCAGTGCTTGATGGGCTAGAAAGGCTGAAAGATAAAGCTCTTATAACTATTTCTGAAGATAAAGTTATATCTGTGCATGATATTATTAGAGAAATGGCTTGGGAGATTGTTCGCCAAGAATCTATTGAAGAGCCTGAAAATCGCAGTAGATTATGGGATCCAAAAGACATTCGTAAAGTATTGGAAAAGGACAAGGGGAGTAAATCCATTAGAGGGATAACTGTACATATGTCTGCAATTAAGAAGCTGAATTTAAGCCCTGACGTGTTTGCTAAGATGAGCAATCTGAAATTTCTTGATTTTCATAGTGAAGACTATTCTGACCGAGTGGATCTTCCTCAAGGGCTTCAACCATTCCCTACTGAATTAAGATATCTTCGTTGGATGACTTACCCTTTGAAATTTTTGCCAGAGAAATTTTCTGCAGAAAACCTTGTTCTATTTGACTTGTCATATAGTAGAGTGGAAAAACTTTGGCTTGGAGTGCAGGATCTAGTGAATTTAAAAGATGTTAAACTCCATGCTTCAATATTCCTAAAGGAGTTGCCTGACTTTTCGAAAGCCACAAATCTTGAAGTACTAGATCTTCGTGATTGTGGTTGGTTGACTAGTGTGCATCCATCTATCTTCACTCTTGAAAAGCTTGAGAAATTGTATCTAAGTGGGTGCACTTCCCTTACCAAACTTACAATCCACACACATTTAAGTTCCCTTCAATACCTCACCCTTCGTGGTTGCCATATGCTAAAGGAATTCTCTGTGACATCAGAGAATATGATAGAATTAGATTTAGGCTTCACAGCTATCAATGCATTGCCTTCATCTATTGGACATCAAAGCAAGCTCGAAATTCTACGTTTAGCAGAAACATGTATTGAAAGCTTGCCTGCAACCATCAAGAATCTTACAAGGCTGCAATATTTGGACATAATGTATTGCAAAGACCTCAGGGCTCTACCTGAGCTTCCTTCATCCATTGAAAAACTTTATGCCAGTCACTGCTCATCACTGAAGACCATTTTGTTCCCTTTAACATTGGCTGCACAACTCAAGGAAAATAGGAAAATAGTTGAGTTTTGGAATTGCTTGAAACTGGATAAACATTCACGCAAGGCTATTGGGTTGAATGCACAAATCAACATGATGAAATTTGCACATCAAAGACATTTATCTGCGCTAGAGGGCAATCATGTTGAAGATTACGAGGACTATGATGCTAAAGTCAAGTATGTGTATCCAGGAAGCAGTGTTCCAGAGTGGTTGGAATACAGGACAACAAAGGATTACGTAGCTATTAATATTTCTTCTGCTTCACATTCCCCTTTATTGGGTTTCATTTTCTGCTTCATTATTCCCAAGGATACATCACGAGCTTTTAGAGTAAAATTAATGATCACTATCAGTGATGATGAGAGAGGAGAAGATGAAGGGTTCAATATTAAATTCGATGTGTTTAGGCCATTGGTTGGAGTTGCATCGGATCATGTGTTTATAGCGTACGACGAACGATGTTCTCGTTACCTAAATAGCAGAGCCCAAAATCAGACAAGGTTTAAAATTTTGGTTAAAGCGGTCTTACCATACAAAGAAACAAAAAAGAGACTGGGATCATATGATGTGTTGGTTGTGTTAAAAGGGTTTGGTGTCAGCCCAATAAACGCCTCAGCATATTTCAAGTTCATTCAACAAATGGAATTTCCTGTTTATACACTGAATACCTTACTTTCATTCAACAAATGGAGCTGGGCAGCAGTGATCGCAACCACCCTATGTATTCCCTTTCTATGGTTTAAGATAAAGGATTTGATTAAAAAGCTCCAGTGA 3168 0.3712 MSEDASSPPPYEVFVSFRGPDVRHGFLSHLNVAFTQKNILAFVDDKLQRGDEISASLLGAIERSLMSLVIFSENYAFSRWCLDELVKIIDCKRENGQIVVPVFYHVDPSDVRNQRGSYGNALAELEEKYNLTKAQSWRSALAEAANLSGFHSSNFKNDAELIEEIIKCVLKTMNDLHQVNSKVYVGSDSKVLVGIDKRIAHLILLLDLESEGVRLIGIWGMGGIGKTTIAKEAFKRLHAKYHASCYLEEVSKKVERNEKESLKQELYSTLLEEDLKIEKTNELPKYAKIRLGRMKVLIILDDVRQVEHLQELVGDHKWFGSGSRIIVTTRDRHVLTNEADDIYEVGELDFDEAHRLFNLNAFKENHIKMEYNEVSKRMVNYAKGIPLVLEVLGGLVRGKDIDVWKSKLSKLEKILDKKLLNLLRLSYDDLDREEQKNFLDLGYYESDDSVLDGLERLKDKALITISEDKVISVHDIIREMAWEIVRQESIEEPENRSRLWDPKDIRKVLEKDKGSKSIRGITVHMSAIKKLNLSPDVFAKMSNLKFLDFHSEDYSDRVDLPQGLQPFPTELRYLRWMTYPLKFLPEKFSAENLVLFDLSYSRVEKLWLGVQDLVNLKDVKLHASIFLKELPDFSKATNLEVLDLRDCGWLTSVHPSIFTLEKLEKLYLSGCTSLTKLTIHTHLSSLQYLTLRGCHMLKEFSVTSENMIELDLGFTAINALPSSIGHQSKLEILRLAETCIESLPATIKNLTRLQYLDIMYCKDLRALPELPSSIEKLYASHCSSLKTILFPLTLAAQLKENRKIVEFWNCLKLDKHSRKAIGLNAQINMMKFAHQRHLSALEGNHVEDYEDYDAKVKYVYPGSSVPEWLEYRTTKDYVAINISSASHSPLLGFIFCFIIPKDTSRAFRVKLMITISDDERGEDEGFNIKFDVFRPLVGVASDHVFIAYDERCSRYLNSRAQNQTRFKILVKAVLPYKETKKRLGSYDVLVVLKGFGVSPINASAYFKFIQQMEFPVYTLNTLLSFNKWSWAAVIATTLCIPFLWFKIKDLIKKLQ* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0790 1055 Gene3D - 10 175 IPR035897 -
Apr10g0790 1055 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1016 IPR044974 GO:0006952
Apr10g0790 1055 Gene3D - 348 431 IPR042197 -
Apr10g0790 1055 PRINTS Disease resistance protein signature 215 230 - -
Apr10g0790 1055 PRINTS Disease resistance protein signature 290 304 - -
Apr10g0790 1055 PRINTS Disease resistance protein signature 382 396 - -
Apr10g0790 1055 PRINTS Disease resistance protein signature 748 764 - -
Apr10g0790 1055 Pfam Leucine rich repeat 637 695 IPR001611 GO:0005515
Apr10g0790 1055 Gene3D Ribonuclease Inhibitor 707 821 IPR032675 -
Apr10g0790 1055 Gene3D Ribonuclease Inhibitor 483 706 IPR032675 -
Apr10g0790 1055 Gene3D - 176 343 IPR027417 -
Apr10g0790 1055 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1016 - -
Apr10g0790 1055 SUPERFAMILY L domain-like 523 786 - -
Apr10g0790 1055 SUPERFAMILY "Winged helix" DNA-binding domain 418 510 IPR036390 -
Apr10g0790 1055 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Apr10g0790 1055 ProSiteProfiles TIR domain profile. 9 173 IPR000157 GO:0007165
Apr10g0790 1055 Pfam NB-ARC domain 209 413 IPR002182 GO:0043531
Apr10g0790 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 441 IPR027417 -
Apr10g0790 1055 Pfam TIR domain 11 177 IPR000157 GO:0007165
Apr10g0790 1055 SMART till_3 10 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0790 Apr-Chr10 19710880 19732201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0790 6 779 WRKY Transcription Factor Family AT4G12020 30.779 1.20e-95 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0790 - - aprc:113850949 1120.15