Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g0789 | ATGGTTTTCAACAAACGAAAGAGTATAGTAGCGCAAGCAAGGTCAGACAGAGCTCTTCATCAATTTGTGTACGATGTTTTTGTTAGCTTTAGAGGCAAAGACATTCGCCATGGTTTCCTCAGCCACTTGACAGAGGGTTTTATTCGAAAGCAAATACATGCCTTTGTAGATGATAAACTTGAGAGAGGAGAATATATATTGCCTTTACTTCTTGAAGTAATTGAAATATCATTCATTTCATTGATCATATTCTCAGAAAACTATGCTTCTTCGCGTTGGTGTTTGCAAGAACTCGTGAAAATAGTTGAATGCAAAGAAAAATATGGGCAAATAGTAATACCTATTTTCTACCATGTGGATCCCACAGATGTAAGACATCAAACAGGGAGTTATGCACAAGCATTTGTTGAACATGAGCTTTTGTATAATTTGACTACGGTGCAAATCTGGAGACATGCTTTGTACAAAGCTGCAAATTTATCAGGAATTAAGTCATCACAATTTCGGAATGAAGCTGAGCTACTTGAACAAATCATTAATCTGGTGTTGAAGAGGTTGAGTACTAAACACGTGTATAACTCAAAAGGACTTTTTGGAATTAGTGAACAAGTTGCATATTTAGAAATATTATTACGTCTAGAGTTAAAAGATGTTCGTGTCATTGGAATTTGGGGCATGGGTGGTATTGGTAAGACAACCATTGCAGAAGCAATATTTAATAAACTGTGTTCTACGTATGAAGGCCATTGCTTTTTGGCAAATTTAAGAGAAGAATCAAGAAGACATGGACTAATTTGTTTAAAAGAAAAGCTTTTTTCTACATTACTAGCTGAGGATGTTAAAATGGATACACCGAATGAATTGTCTGATTATATTAAGAGAAGAATTGGTCGTATGAAGGTTCTTATTGTTCTTGATGATATGAATGATTCAGATCAATTAGAAATATTATTTGGGAAGGTTGATTGGTTTGGACCAGGTAGTAGAATAATTATAACAAGTAGAGATAAGCAAGTGCTTATTGCTAACAAAGTTAATGATATATACCGAGTTTGGGGATTAAGTTCCAGTGAAGCACTTAAACTTTTCAATGTGAATGCATTTAACCAAAGTCATCTTGAAAATGATTATTACGAGCTATCAAAGAAGGTGATTAGTTATGCCGATGGTGTTCCATTAGTTCTTAAAGTTTTGGGGCATCTTCTTCATGGAAAAGATAAGGAAGTATGGAAAAGTCAGCTAGACAAACTTAGAAAAATGCCAACTAAAAAGGTTCATGATGTAATGAGACTGAGCTATGATGATCTAGATCGTGAAGAGCAAAAGATTTTTTTAGATCTTGCATGCTTCTTTAGTGGATTAAATTTGAAAGTGGAATACTTAAAATTCTTATTGAAAGATGATCGAAGTGATAATTCAGTGGCTGTTGGGTTAGAAAGGTTGAAAGACAAAGCTCTTATAAATATTTTCAGAGATAATGTTGTATCTATGCATGACATTATAAAAGAAATGGGTTGGGAGATTGTTCGTCAAGAATCTAATGAATACCCGGGAAGTCCCAGTCGATTATGGGATCCTGTTGACCTTTATGCTTCACTAAACAATGCTAAGGGGATTGAGGCCATTAGAAGCATAAGGATGCACTTGTCATTTCTCCGGAAGCTGAAATTATGCCCTCACATATTTGCTAAGATGAACAAATTACAATTTCTCGATATTCATGGTGAATATGATGAAGACTGCTCAGATAATCTTCCTCAAGGGCTTCAACATTTGCCAACTGAACTAAGATATCTTCGTTGGGTGCAATACCCTTTGAAATCCTTGCCAGAGAAATTCAATGCTGAAAAACTTGTCTTATTAGACTTATCATATAGCAAAGTTGAAATGTTATGGAAGGGAGTTCAGAATCTAGAAAATTTAAAAGAAGTAAAACTCTTAGCTTGTTCTCTCTTGAAAGAACTACCGGACTTTTCAAAAGCCATAAATCTCGAAGTACTGGATATTCGTGGTTGTTGCTCATTGACTAGTGTGCATCCCTCTATTTTCTCCCATAACAAGCTTGATAAAAGAAAGGTTGAGTTTTGGAATTTCTTGCACTTGGATGAGCTTTCTTTAATGGCCATTCAATCTAATGCACAAATCAATGTGATGAAATTTGCATACCAACATTTATCCACACCGGAACGTAGTTATGCTGCAGGTTTCAATGATGAATATTTTCAAGCTGCATATGTATATCCAGGCAACAACATTCCTAAGTGGTTAGAGTTTCAAACAAAAAAGGACTACATGTTTATTAATATCTCTTCTGTGCCATATTCCCCTCGATTCGGCTTCATTTTCTGCTTCATTGTTGGCAAGGCAAAGTCAGAATTTGGTAGTTTGAATCTTGGCCTTACTATAATCAATGATGATGATGAAGAAGATGGAATGTTGAAGAGGACTCATGGAATGTACATGTCTAGAACAATAGACCATATTGCAGCAGATCATGTGTGTGTGATATATGATCAACGTTGGTCTTACCACCTAAATACCGTAGCCAAAAGTCAGCCATGGTTTAAAATCAAGGTCAGAAGTCGTGCATATCCCTTCAAACTCAATAGTCCAGATCCACCACAAGCAGTGTTAAAAGGGTTTGGTGTTAGTGTGGTAAGCAACACCACATATCACAACTTTATTCAACATGAATTAAGTGATCATTTAAGAAATAGATTTAGCTTGTGCTTAGTATCTTTATATGTATTTCCTTCTTATGGTTTAAGTTAA | 2772 | 0.3532 | MVFNKRKSIVAQARSDRALHQFVYDVFVSFRGKDIRHGFLSHLTEGFIRKQIHAFVDDKLERGEYILPLLLEVIEISFISLIIFSENYASSRWCLQELVKIVECKEKYGQIVIPIFYHVDPTDVRHQTGSYAQAFVEHELLYNLTTVQIWRHALYKAANLSGIKSSQFRNEAELLEQIINLVLKRLSTKHVYNSKGLFGISEQVAYLEILLRLELKDVRVIGIWGMGGIGKTTIAEAIFNKLCSTYEGHCFLANLREESRRHGLICLKEKLFSTLLAEDVKMDTPNELSDYIKRRIGRMKVLIVLDDMNDSDQLEILFGKVDWFGPGSRIIITSRDKQVLIANKVNDIYRVWGLSSSEALKLFNVNAFNQSHLENDYYELSKKVISYADGVPLVLKVLGHLLHGKDKEVWKSQLDKLRKMPTKKVHDVMRLSYDDLDREEQKIFLDLACFFSGLNLKVEYLKFLLKDDRSDNSVAVGLERLKDKALINIFRDNVVSMHDIIKEMGWEIVRQESNEYPGSPSRLWDPVDLYASLNNAKGIEAIRSIRMHLSFLRKLKLCPHIFAKMNKLQFLDIHGEYDEDCSDNLPQGLQHLPTELRYLRWVQYPLKSLPEKFNAEKLVLLDLSYSKVEMLWKGVQNLENLKEVKLLACSLLKELPDFSKAINLEVLDIRGCCSLTSVHPSIFSHNKLDKRKVEFWNFLHLDELSLMAIQSNAQINVMKFAYQHLSTPERSYAAGFNDEYFQAAYVYPGNNIPKWLEFQTKKDYMFINISSVPYSPRFGFIFCFIVGKAKSEFGSLNLGLTIINDDDEEDGMLKRTHGMYMSRTIDHIAADHVCVIYDQRWSYHLNTVAKSQPWFKIKVRSRAYPFKLNSPDPPQAVLKGFGVSVVSNTTYHNFIQHELSDHLRNRFSLCLVSLYVFPSYGLS* | 924 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g0789 | 923 | Gene3D | Ribonuclease Inhibitor | 528 | 721 | IPR032675 | - | |
Apr10g0789 | 923 | Gene3D | - | 353 | 437 | IPR042197 | - | |
Apr10g0789 | 923 | Gene3D | - | 23 | 188 | IPR035897 | - | |
Apr10g0789 | 923 | SMART | till_3 | 23 | 160 | IPR000157 | GO:0007165 | |
Apr10g0789 | 923 | Pfam | NB-ARC domain | 215 | 433 | IPR002182 | GO:0043531 | |
Apr10g0789 | 923 | SUPERFAMILY | L domain-like | 548 | 707 | - | - | |
Apr10g0789 | 923 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | 25 | 690 | - | - | |
Apr10g0789 | 923 | Pfam | TIR domain | 24 | 188 | IPR000157 | GO:0007165 | |
Apr10g0789 | 923 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 696 | 898 | IPR044974 | GO:0006952 | |
Apr10g0789 | 923 | PRINTS | Disease resistance protein signature | 220 | 235 | - | - | |
Apr10g0789 | 923 | PRINTS | Disease resistance protein signature | 636 | 652 | - | - | |
Apr10g0789 | 923 | PRINTS | Disease resistance protein signature | 388 | 402 | - | - | |
Apr10g0789 | 923 | PRINTS | Disease resistance protein signature | 295 | 309 | - | - | |
Apr10g0789 | 923 | Gene3D | - | 189 | 347 | IPR027417 | - | |
Apr10g0789 | 923 | SUPERFAMILY | "Winged helix" DNA-binding domain | 423 | 530 | IPR036390 | - | |
Apr10g0789 | 923 | ProSiteProfiles | TIR domain profile. | 22 | 186 | IPR000157 | GO:0007165 | |
Apr10g0789 | 923 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 25 | 690 | IPR044974 | GO:0006952 | |
Apr10g0789 | 923 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 15 | 162 | IPR035897 | - | |
Apr10g0789 | 923 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 188 | 447 | IPR027417 | - | |
Apr10g0789 | 923 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | 696 | 898 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g0789 | Apr-Chr10 | 19705329 | 19708898 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g0789 | 24 | 672 | WRKY Transcription Factor Family | AT4G12020 | 31.818 | 4.76e-85 | 298 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g0789 | - | - | aprc:113850949 | 880.552 |