Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0788 ATGGATGTCGCATCAGAGCAAGAGTCAGATGATGTTCGACAAATGACGTATGATGTCTTTGTTAGCTTTAGGGGCGAGGACATTCGTCATGGATTTCTTGGTCATTTGACTAAGGCTTTAAAACAAAAGCAAATATATGCTTTTGTAGATGATGATCTTGAGAAGGGAGAGGAAATATGGTCATCACTAATTGGAGCAATTAAAGGATCGTTGATTTCTTTGACCATATTCTCTGAAAACTATGCTTCTTCGCGTTGGTGTTTGGAAGAACTAGTGACAATACTTGAGTGCCGAGAGAAATATGGACAAACTGTTATACCTGTTTTCTACCATGTAGAACCTACAGTTGTACGACATCAGAAGGGGAATTATTCAATTGCTTTTGTTGAACATGAAAAAAAATATAATTCGACCACAGTGCAAAACTGGAGACATGCTTTGAGAAAAGCTGCTGATTTATCAGGAATAACTTCAATCAATTACCAGACCGAAGTTCAGTTCCTTGGAGAAGTCGTCAACATTGTCAATCTAATGTTGATGAGGTTGGGTAAACATCCGGCTAACATAAAAGGACTTATAGGAATCGACAAAGCAACTCAACACATAGAATCATTGTTACATCAACAGCCAAAAAGTGTTCGTGTCATTGGAATTTGGGGTATGGGCGGTATTGGAAAGACAACAATTGCAGAGGAGATATTTAACAAACTATATTTTGAATATGATAGTTATTATTTTTTGGCAAATGTAAGGAAAGAATCAGGAAGACATGAAACAATATTTTTGAAGGAAAAACTTTTTTCTACACTACTAGAAGAAAATGTGAAATTGAACACAGAAAATGGGTTGTCCAATTATATTAAAAGAAAGATTGGTCGTATGAAGGTCTTGATTATTCTTGATGATGTCAATGATTCTGATCTACCAGAAAAACTCCTTGGAAACATTGATTGGTTTGGTCCGGGGAGTAGAATCATTATAACAACTCGAGACAAGCAAGTGCTTGTGGCAAATAAAGTTGATGATATATACCAAGTTGGGGCAATGAACTCTACTGAAGCGCTTGAGCTTTTTAGTTTGTATGCCTTTAAAGAAACTCATTTTGAAATGGAGTATTATAAGCTATCAAAGAAGGTGGTCAATTATGCTGAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCGTCTATTATGTGGAAAAGATAAGAAAGTGTGGGAAAGTCACTTGGACAAACTTAAAAGCATGCCAAATACAGATGTTTACAAAGTAATGAGATTGAGTTATGAGGATCTAGATCGCAAAGAACAACAAATATTTTTAGATCTTGCATGTAGTGAAAGAGATAATTCAGTGGTTGCTGTGTTAGAAAGGTTAAAAGACAAAGCTCTTATAACCATTTCTCAAGATAATGTTGTATCTATGCACGATATTATACAAGAAACAGGTTGGGAGATTGTTCGTCAAGAATCTATTGAAGACCCTGGAAGCCGAAGCCGATTGTGGGATCCTGATGACATTTATGAAGTATTTAAAAATAATAAGGGGACTGAGTCCATATGGAGCATACGAGTGCACTTGTCAGTCCTTAAGAAGCTAAACCTAAGCCCTCACATATTTACTAAGATGAGTAAAGTAAAATTTTTGTATTTTCCTGGATATGAAGATGGCTTTGATCTTCTTCCTCATGGGCTTCAATCATTCCCAGATGAACTAAGATATCTCTCTTGGATGCATTACCCTCTGAAATCCTTGCCAGAGAATTTTTCTCCCCAAAATCTTGTTATGTTGGACTTGCAATTTAGCCAAGTGGAAAAGATTTGGAATGGAGTGCAGAATTTGGTAAATCTAAAAGAAATCAAAGTCTCTAGTTCCAGAAACCTAAAGGGGCTGCCGGACCTTTCAAAAGCCACAAATCTTGAAGTATTGGACATCAAGTTTTGTCCTCAAATGACTAGTGTCCCCCCATCTATTTTCTCTCTGAACAAGCTCCAGAAATTGGATCTAAGTGATTGTTCCCTCAACAAAATTCTAAGTGTTAACCATTTAAGTTCCCTTAGTCATCTCAATCTTCGCTCATGCACAAAACTAAAGGAATTTTCAGTGACATCAGAGAATATGGTTAACTTAGATTTATCTGTCACTCGTGTCAAGGCATTGCCCCCAACTTTTGGACGTCAGAGCAAGCTTGAAATCCTATCACTTGCAAGCAGCGGCATACAGAGCTTCCCTTCAAGCTTCAAAAATCTTACAAGATTGCGATATCTGGATATACGTAATTGCAAGGATCTTCGTACCCTGACACAGCTTCCCCCATCACTTGAAACTCTGTATGCCACAGATTGCTCATCTTTGAAGAATGTATTATTTCCATCAGTTACTGAACAATTCAAAGAAAGTAGGAAAGATATTTCATTTTGGAATTGTTTGAATCTGGATGACCATTCTCTCAAGGCTATCGAGTTAAATGCACACATAAATGCGATGAAATTTGCATATCAACATCCTGCACCAAATGAAAATTATGATGATCACAAATATCGTGGTGTTGGATCTTATCATGTAAAGTATGTGTATCCAGGAAGCAGTGTTCCAGAGTGGATGGAGTATAAGACAACAAAGGATTATATGAAAATTGATATCTCTTCTATTCCACATTCCTCTCAACTGGGCTTCATTTTTAGCTTTGTTATCTATGGCCCTAAAAGGAAGACAACTGTTTTTGGATTTTCATTTTATATCACTATCAGTGATATTGAGGATGATAGTAAAAAGGATACAATTAGGATCTTCATGCCTGATTCAGTTCCTTGGATTTCAAAGGATCACGTGTGTGTGGTTTATGACCAAGAATGTTCTCACTACCTAAACAGTAGAGCCAAAAACCAGACAAGGTTTAAGATCAAGGTTAATGTAATGGCATTAGGCAGAGAACGACCACAAGGTGTGGAGGGGTTAAAAGGCTTCGGGTTCAGTTCAATAAACACCTCAACATATCACAGTTTCATGGAACACATAAACACCACAGCATGCAAAACACTAAGGGAATTTTCAGTGACGTCAGTGAATATGATTATGCTAGATTTATCTGCCACTCATGTCAAGGCATTGCCAACATCTTCTGGCCGTCAAAGCACGCTTGAAATCTTATTTATAATGAGCAGTGGCATCCAGATCTTCCCTTCATGCTCCAAAAATCTTACAAGATTGCAATATTTGGGTATACGTAATTGCCAGGGTCTTCAAACTTTAACAGAGCTTCTCCTATCCCTTGAAAATCTATATGCAACAGATTTCACATATTTGAAGACTGTACTGTTTCCATCAATTGCTGAACAATTCAAGGAAAGTAGGAAAGTTGTTTGCTTTTGGAATTGCTTGAATCTGGACAACCATTCTATCAAGGTTATTGCGTTAAATGCACATATTAACGCAATGAAATTTGCATACCATTATCTACCTGCACCAAATGAAAATTATGATGATTACAAATATTGTAGTGATGAATCTTATCATGTAAAATTGGGCTTCATTTTCAGCTTTGTTGTCTGTTGCCCTAACTTGAAGACAAGAAATGCTCTTCGACTTATATTTTATATCACTATCAGTGCTGTTGAAGATGAAAGTAAAAAGGATACAATTGACATCTTCTTGCCTGATTCACTTTTCTGGATTTAA 3675 0.3668 MDVASEQESDDVRQMTYDVFVSFRGEDIRHGFLGHLTKALKQKQIYAFVDDDLEKGEEIWSSLIGAIKGSLISLTIFSENYASSRWCLEELVTILECREKYGQTVIPVFYHVEPTVVRHQKGNYSIAFVEHEKKYNSTTVQNWRHALRKAADLSGITSINYQTEVQFLGEVVNIVNLMLMRLGKHPANIKGLIGIDKATQHIESLLHQQPKSVRVIGIWGMGGIGKTTIAEEIFNKLYFEYDSYYFLANVRKESGRHETIFLKEKLFSTLLEENVKLNTENGLSNYIKRKIGRMKVLIILDDVNDSDLPEKLLGNIDWFGPGSRIIITTRDKQVLVANKVDDIYQVGAMNSTEALELFSLYAFKETHFEMEYYKLSKKVVNYAEGIPLVLKVLGRLLCGKDKKVWESHLDKLKSMPNTDVYKVMRLSYEDLDRKEQQIFLDLACSERDNSVVAVLERLKDKALITISQDNVVSMHDIIQETGWEIVRQESIEDPGSRSRLWDPDDIYEVFKNNKGTESIWSIRVHLSVLKKLNLSPHIFTKMSKVKFLYFPGYEDGFDLLPHGLQSFPDELRYLSWMHYPLKSLPENFSPQNLVMLDLQFSQVEKIWNGVQNLVNLKEIKVSSSRNLKGLPDLSKATNLEVLDIKFCPQMTSVPPSIFSLNKLQKLDLSDCSLNKILSVNHLSSLSHLNLRSCTKLKEFSVTSENMVNLDLSVTRVKALPPTFGRQSKLEILSLASSGIQSFPSSFKNLTRLRYLDIRNCKDLRTLTQLPPSLETLYATDCSSLKNVLFPSVTEQFKESRKDISFWNCLNLDDHSLKAIELNAHINAMKFAYQHPAPNENYDDHKYRGVGSYHVKYVYPGSSVPEWMEYKTTKDYMKIDISSIPHSSQLGFIFSFVIYGPKRKTTVFGFSFYITISDIEDDSKKDTIRIFMPDSVPWISKDHVCVVYDQECSHYLNSRAKNQTRFKIKVNVMALGRERPQGVEGLKGFGFSSINTSTYHSFMEHINTTACKTLREFSVTSVNMIMLDLSATHVKALPTSSGRQSTLEILFIMSSGIQIFPSCSKNLTRLQYLGIRNCQGLQTLTELLLSLENLYATDFTYLKTVLFPSIAEQFKESRKVVCFWNCLNLDNHSIKVIALNAHINAMKFAYHYLPAPNENYDDYKYCSDESYHVKLGFIFSFVVCCPNLKTRNALRLIFYITISAVEDESKKDTIDIFLPDSLFWI* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0788 1224 Gene3D - 348 432 IPR042197 -
Apr10g0788 1224 ProSiteProfiles Leucine-rich repeat profile. 662 683 IPR001611 GO:0005515
Apr10g0788 1224 ProSiteProfiles TIR domain profile. 15 179 IPR000157 GO:0007165
Apr10g0788 1224 Pfam TIR domain 17 175 IPR000157 GO:0007165
Apr10g0788 1224 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 1004 1174 - -
Apr10g0788 1224 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 17 1005 - -
Apr10g0788 1224 SUPERFAMILY L domain-like 1003 1127 - -
Apr10g0788 1224 Gene3D - 180 343 IPR027417 -
Apr10g0788 1224 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 1005 IPR044974 GO:0006952
Apr10g0788 1224 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1004 1174 IPR044974 GO:0006952
Apr10g0788 1224 SUPERFAMILY "Winged helix" DNA-binding domain 419 510 IPR036390 -
Apr10g0788 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 442 IPR027417 -
Apr10g0788 1224 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 155 IPR035897 -
Apr10g0788 1224 Gene3D Ribonuclease Inhibitor 512 677 IPR032675 -
Apr10g0788 1224 Gene3D Ribonuclease Inhibitor 678 824 IPR032675 -
Apr10g0788 1224 Gene3D Ribonuclease Inhibitor 989 1139 IPR032675 -
Apr10g0788 1224 Gene3D - 14 179 IPR035897 -
Apr10g0788 1224 Pfam NB-ARC domain 202 429 IPR002182 GO:0043531
Apr10g0788 1224 PRINTS Disease resistance protein signature 215 230 - -
Apr10g0788 1224 PRINTS Disease resistance protein signature 290 304 - -
Apr10g0788 1224 PRINTS Disease resistance protein signature 383 397 - -
Apr10g0788 1224 PRINTS Disease resistance protein signature 747 763 - -
Apr10g0788 1224 SUPERFAMILY L domain-like 524 804 - -
Apr10g0788 1224 SMART till_3 16 153 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0788 Apr-Chr10 19689779 19696595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0788 17 797 WRKY Transcription Factor Family AT4G12020 33.252 1.84e-98 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0788 - - aprc:113850943 2429.44