Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g0788 | ATGGATGTCGCATCAGAGCAAGAGTCAGATGATGTTCGACAAATGACGTATGATGTCTTTGTTAGCTTTAGGGGCGAGGACATTCGTCATGGATTTCTTGGTCATTTGACTAAGGCTTTAAAACAAAAGCAAATATATGCTTTTGTAGATGATGATCTTGAGAAGGGAGAGGAAATATGGTCATCACTAATTGGAGCAATTAAAGGATCGTTGATTTCTTTGACCATATTCTCTGAAAACTATGCTTCTTCGCGTTGGTGTTTGGAAGAACTAGTGACAATACTTGAGTGCCGAGAGAAATATGGACAAACTGTTATACCTGTTTTCTACCATGTAGAACCTACAGTTGTACGACATCAGAAGGGGAATTATTCAATTGCTTTTGTTGAACATGAAAAAAAATATAATTCGACCACAGTGCAAAACTGGAGACATGCTTTGAGAAAAGCTGCTGATTTATCAGGAATAACTTCAATCAATTACCAGACCGAAGTTCAGTTCCTTGGAGAAGTCGTCAACATTGTCAATCTAATGTTGATGAGGTTGGGTAAACATCCGGCTAACATAAAAGGACTTATAGGAATCGACAAAGCAACTCAACACATAGAATCATTGTTACATCAACAGCCAAAAAGTGTTCGTGTCATTGGAATTTGGGGTATGGGCGGTATTGGAAAGACAACAATTGCAGAGGAGATATTTAACAAACTATATTTTGAATATGATAGTTATTATTTTTTGGCAAATGTAAGGAAAGAATCAGGAAGACATGAAACAATATTTTTGAAGGAAAAACTTTTTTCTACACTACTAGAAGAAAATGTGAAATTGAACACAGAAAATGGGTTGTCCAATTATATTAAAAGAAAGATTGGTCGTATGAAGGTCTTGATTATTCTTGATGATGTCAATGATTCTGATCTACCAGAAAAACTCCTTGGAAACATTGATTGGTTTGGTCCGGGGAGTAGAATCATTATAACAACTCGAGACAAGCAAGTGCTTGTGGCAAATAAAGTTGATGATATATACCAAGTTGGGGCAATGAACTCTACTGAAGCGCTTGAGCTTTTTAGTTTGTATGCCTTTAAAGAAACTCATTTTGAAATGGAGTATTATAAGCTATCAAAGAAGGTGGTCAATTATGCTGAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCGTCTATTATGTGGAAAAGATAAGAAAGTGTGGGAAAGTCACTTGGACAAACTTAAAAGCATGCCAAATACAGATGTTTACAAAGTAATGAGATTGAGTTATGAGGATCTAGATCGCAAAGAACAACAAATATTTTTAGATCTTGCATGTAGTGAAAGAGATAATTCAGTGGTTGCTGTGTTAGAAAGGTTAAAAGACAAAGCTCTTATAACCATTTCTCAAGATAATGTTGTATCTATGCACGATATTATACAAGAAACAGGTTGGGAGATTGTTCGTCAAGAATCTATTGAAGACCCTGGAAGCCGAAGCCGATTGTGGGATCCTGATGACATTTATGAAGTATTTAAAAATAATAAGGGGACTGAGTCCATATGGAGCATACGAGTGCACTTGTCAGTCCTTAAGAAGCTAAACCTAAGCCCTCACATATTTACTAAGATGAGTAAAGTAAAATTTTTGTATTTTCCTGGATATGAAGATGGCTTTGATCTTCTTCCTCATGGGCTTCAATCATTCCCAGATGAACTAAGATATCTCTCTTGGATGCATTACCCTCTGAAATCCTTGCCAGAGAATTTTTCTCCCCAAAATCTTGTTATGTTGGACTTGCAATTTAGCCAAGTGGAAAAGATTTGGAATGGAGTGCAGAATTTGGTAAATCTAAAAGAAATCAAAGTCTCTAGTTCCAGAAACCTAAAGGGGCTGCCGGACCTTTCAAAAGCCACAAATCTTGAAGTATTGGACATCAAGTTTTGTCCTCAAATGACTAGTGTCCCCCCATCTATTTTCTCTCTGAACAAGCTCCAGAAATTGGATCTAAGTGATTGTTCCCTCAACAAAATTCTAAGTGTTAACCATTTAAGTTCCCTTAGTCATCTCAATCTTCGCTCATGCACAAAACTAAAGGAATTTTCAGTGACATCAGAGAATATGGTTAACTTAGATTTATCTGTCACTCGTGTCAAGGCATTGCCCCCAACTTTTGGACGTCAGAGCAAGCTTGAAATCCTATCACTTGCAAGCAGCGGCATACAGAGCTTCCCTTCAAGCTTCAAAAATCTTACAAGATTGCGATATCTGGATATACGTAATTGCAAGGATCTTCGTACCCTGACACAGCTTCCCCCATCACTTGAAACTCTGTATGCCACAGATTGCTCATCTTTGAAGAATGTATTATTTCCATCAGTTACTGAACAATTCAAAGAAAGTAGGAAAGATATTTCATTTTGGAATTGTTTGAATCTGGATGACCATTCTCTCAAGGCTATCGAGTTAAATGCACACATAAATGCGATGAAATTTGCATATCAACATCCTGCACCAAATGAAAATTATGATGATCACAAATATCGTGGTGTTGGATCTTATCATGTAAAGTATGTGTATCCAGGAAGCAGTGTTCCAGAGTGGATGGAGTATAAGACAACAAAGGATTATATGAAAATTGATATCTCTTCTATTCCACATTCCTCTCAACTGGGCTTCATTTTTAGCTTTGTTATCTATGGCCCTAAAAGGAAGACAACTGTTTTTGGATTTTCATTTTATATCACTATCAGTGATATTGAGGATGATAGTAAAAAGGATACAATTAGGATCTTCATGCCTGATTCAGTTCCTTGGATTTCAAAGGATCACGTGTGTGTGGTTTATGACCAAGAATGTTCTCACTACCTAAACAGTAGAGCCAAAAACCAGACAAGGTTTAAGATCAAGGTTAATGTAATGGCATTAGGCAGAGAACGACCACAAGGTGTGGAGGGGTTAAAAGGCTTCGGGTTCAGTTCAATAAACACCTCAACATATCACAGTTTCATGGAACACATAAACACCACAGCATGCAAAACACTAAGGGAATTTTCAGTGACGTCAGTGAATATGATTATGCTAGATTTATCTGCCACTCATGTCAAGGCATTGCCAACATCTTCTGGCCGTCAAAGCACGCTTGAAATCTTATTTATAATGAGCAGTGGCATCCAGATCTTCCCTTCATGCTCCAAAAATCTTACAAGATTGCAATATTTGGGTATACGTAATTGCCAGGGTCTTCAAACTTTAACAGAGCTTCTCCTATCCCTTGAAAATCTATATGCAACAGATTTCACATATTTGAAGACTGTACTGTTTCCATCAATTGCTGAACAATTCAAGGAAAGTAGGAAAGTTGTTTGCTTTTGGAATTGCTTGAATCTGGACAACCATTCTATCAAGGTTATTGCGTTAAATGCACATATTAACGCAATGAAATTTGCATACCATTATCTACCTGCACCAAATGAAAATTATGATGATTACAAATATTGTAGTGATGAATCTTATCATGTAAAATTGGGCTTCATTTTCAGCTTTGTTGTCTGTTGCCCTAACTTGAAGACAAGAAATGCTCTTCGACTTATATTTTATATCACTATCAGTGCTGTTGAAGATGAAAGTAAAAAGGATACAATTGACATCTTCTTGCCTGATTCACTTTTCTGGATTTAA | 3675 | 0.3668 | MDVASEQESDDVRQMTYDVFVSFRGEDIRHGFLGHLTKALKQKQIYAFVDDDLEKGEEIWSSLIGAIKGSLISLTIFSENYASSRWCLEELVTILECREKYGQTVIPVFYHVEPTVVRHQKGNYSIAFVEHEKKYNSTTVQNWRHALRKAADLSGITSINYQTEVQFLGEVVNIVNLMLMRLGKHPANIKGLIGIDKATQHIESLLHQQPKSVRVIGIWGMGGIGKTTIAEEIFNKLYFEYDSYYFLANVRKESGRHETIFLKEKLFSTLLEENVKLNTENGLSNYIKRKIGRMKVLIILDDVNDSDLPEKLLGNIDWFGPGSRIIITTRDKQVLVANKVDDIYQVGAMNSTEALELFSLYAFKETHFEMEYYKLSKKVVNYAEGIPLVLKVLGRLLCGKDKKVWESHLDKLKSMPNTDVYKVMRLSYEDLDRKEQQIFLDLACSERDNSVVAVLERLKDKALITISQDNVVSMHDIIQETGWEIVRQESIEDPGSRSRLWDPDDIYEVFKNNKGTESIWSIRVHLSVLKKLNLSPHIFTKMSKVKFLYFPGYEDGFDLLPHGLQSFPDELRYLSWMHYPLKSLPENFSPQNLVMLDLQFSQVEKIWNGVQNLVNLKEIKVSSSRNLKGLPDLSKATNLEVLDIKFCPQMTSVPPSIFSLNKLQKLDLSDCSLNKILSVNHLSSLSHLNLRSCTKLKEFSVTSENMVNLDLSVTRVKALPPTFGRQSKLEILSLASSGIQSFPSSFKNLTRLRYLDIRNCKDLRTLTQLPPSLETLYATDCSSLKNVLFPSVTEQFKESRKDISFWNCLNLDDHSLKAIELNAHINAMKFAYQHPAPNENYDDHKYRGVGSYHVKYVYPGSSVPEWMEYKTTKDYMKIDISSIPHSSQLGFIFSFVIYGPKRKTTVFGFSFYITISDIEDDSKKDTIRIFMPDSVPWISKDHVCVVYDQECSHYLNSRAKNQTRFKIKVNVMALGRERPQGVEGLKGFGFSSINTSTYHSFMEHINTTACKTLREFSVTSVNMIMLDLSATHVKALPTSSGRQSTLEILFIMSSGIQIFPSCSKNLTRLQYLGIRNCQGLQTLTELLLSLENLYATDFTYLKTVLFPSIAEQFKESRKVVCFWNCLNLDNHSIKVIALNAHINAMKFAYHYLPAPNENYDDYKYCSDESYHVKLGFIFSFVVCCPNLKTRNALRLIFYITISAVEDESKKDTIDIFLPDSLFWI* | 1225 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g0788 | 1224 | Gene3D | - | 348 | 432 | IPR042197 | - | |
Apr10g0788 | 1224 | ProSiteProfiles | Leucine-rich repeat profile. | 662 | 683 | IPR001611 | GO:0005515 | |
Apr10g0788 | 1224 | ProSiteProfiles | TIR domain profile. | 15 | 179 | IPR000157 | GO:0007165 | |
Apr10g0788 | 1224 | Pfam | TIR domain | 17 | 175 | IPR000157 | GO:0007165 | |
Apr10g0788 | 1224 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | 1004 | 1174 | - | - | |
Apr10g0788 | 1224 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | 17 | 1005 | - | - | |
Apr10g0788 | 1224 | SUPERFAMILY | L domain-like | 1003 | 1127 | - | - | |
Apr10g0788 | 1224 | Gene3D | - | 180 | 343 | IPR027417 | - | |
Apr10g0788 | 1224 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 17 | 1005 | IPR044974 | GO:0006952 | |
Apr10g0788 | 1224 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 1004 | 1174 | IPR044974 | GO:0006952 | |
Apr10g0788 | 1224 | SUPERFAMILY | "Winged helix" DNA-binding domain | 419 | 510 | IPR036390 | - | |
Apr10g0788 | 1224 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 184 | 442 | IPR027417 | - | |
Apr10g0788 | 1224 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 9 | 155 | IPR035897 | - | |
Apr10g0788 | 1224 | Gene3D | Ribonuclease Inhibitor | 512 | 677 | IPR032675 | - | |
Apr10g0788 | 1224 | Gene3D | Ribonuclease Inhibitor | 678 | 824 | IPR032675 | - | |
Apr10g0788 | 1224 | Gene3D | Ribonuclease Inhibitor | 989 | 1139 | IPR032675 | - | |
Apr10g0788 | 1224 | Gene3D | - | 14 | 179 | IPR035897 | - | |
Apr10g0788 | 1224 | Pfam | NB-ARC domain | 202 | 429 | IPR002182 | GO:0043531 | |
Apr10g0788 | 1224 | PRINTS | Disease resistance protein signature | 215 | 230 | - | - | |
Apr10g0788 | 1224 | PRINTS | Disease resistance protein signature | 290 | 304 | - | - | |
Apr10g0788 | 1224 | PRINTS | Disease resistance protein signature | 383 | 397 | - | - | |
Apr10g0788 | 1224 | PRINTS | Disease resistance protein signature | 747 | 763 | - | - | |
Apr10g0788 | 1224 | SUPERFAMILY | L domain-like | 524 | 804 | - | - | |
Apr10g0788 | 1224 | SMART | till_3 | 16 | 153 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g0788 | Apr-Chr10 | 19689779 | 19696595 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g0788 | 17 | 797 | WRKY Transcription Factor Family | AT4G12020 | 33.252 | 1.84e-98 | 344 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g0788 | - | - | aprc:113850943 | 2429.44 |