Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0787 ATGGCGTATTCTTTTGCTGGAGCTTCTCAAATAAGATATGCTAGACAATGTTGGCCTTCTGGAAATGAGGCATTGCCTAAAGGAATTGTTGCCAGAACATCTAACTTGGAAATGCGGTTATGGGACTCTGGTATATACAATAGAATTTCAAAGCGCCCATTGAACTTTCTGGCCATTGCAAAAGGAGGGAGGAAGAACAAATTTGTCAATAAAATTGTTGCAAAGGCAGAAGCAGGGAAACCAATGTCCGACAATGCTCCTCAAATAAAGTATGATGTTTTTGTTAGCTTTAGAGGTGAAGACATCCGCAGTGGTTTTCTTGGTCATTTGAGTGAGGCATTTTCTCAGAAGCAAATATATGCCTTCATAGATGAAAAACTCAAAAAAGGAGATAGTGTTTGGCCATCACTTGAGAAAGCAATTGAAGGATCTTTTATATCTCTGATCATATTCTCAAAAAATTATGCTTCTTCAAGTTGGTGTTTGAAAGAACTCGTGAAAATACTTGAGTGCAGAGACAAATACAAACGGATTGTAATACCTGTTTTCTACAATGTAGAACCCACAGTTGTTCGGCATCAAAACAAATTTTATGCAATTGCATTTGTTTTTCATCAAATAAAATATGGTTTGTCCATGGTAAAATTATGGAAAAAGGCTTTGGAGGATTCTTCTAATTTATCTGGAATTAAGTCAACAGATTTTCGGAATGATGCTGAGATGCTTGATGAAATTGTCAAGCAGGTGTTGATGAGGTTCAGTAAACACCCGATTAATATGAAAGGACTTATTGGAATTGGCAAACCAATTTCAGATATAGAATCATTGTTATGTCAAGAGTCAAAGGATGTTCGTGTTATCGGAATTTGGGGTATGGGTGGTATTGGTAAGACAACAATTGCAGAAGAAGTGTTTAACAAACTATATTCTAAATATGAAGGATGCTGTTTTTTGGCAAATGTAAGAGAGGAATTAAGGAGAAATGGAATAATTTCTTTAAAGGAACAGGTTTTTTCTACCCTACTAGGAGAAGTTGTGAAAATTAACACTCCAAATGGATTGTCTGATTATATTAAAAGAAGGATTGGGCGTCAGAAGGTTCTTATTATTCTTGATGATGTGAATGATTCAGATCAAATAGAAATATTGTTAGGAACTCGTGATTGGTTTGGAGGAGGTAGTAGAATAATTATAACAACAAGAGATAAGCGAGTGCTCATTGCTAACAGAGTTGATGATATATACAAGGTTGACGTATTGAGCAGCAGTGATGCACTTAAGCTTTTTAATTTGAAAGCATTTGACCAAAATCAGATTAAAGTGGAGTATCATGAGCTTTCTAAGAGGGTTGTCAATTATGCCAAAGGTATTCCACTAGTTCTTGAAGTTTTGGGTCGTCTTCTTTGTGGTAAAGATAAGGTAGCATGGGAAAGTCAGCTGGAGATACTTGAAAAAATGCCAATTAAAAAAGTTTATGATATAATGAGACTAAGTTATGACGATCTAGATCGTAAAGAGCAAAAAGTTTTTTTAGATGTTGCATATCAGGAAAGTGATAATTCAGTGGCTGTTGTGTTAGAAAGGCTGGAAGATAGAGCTCTTGTAAGTATTTCTAAGCATAATGTTGTGTCTATGCATGATATTATACAAGAAATGGCTTGGGAGATTGTTCGCCAAGAATCTAGTGAATCGGGAAGACACAGCCGATTGGGGGATCCTGATGAAATATATGAAGTACTGAAAAATGACAAGGGAATGGAGGATATTAGAAGCATAAAGTCACACTTGCCTGCAGTAAAGAAGCTGATGTTATGCCCCAACATATTTGCTAAGATGAGGAAACTACTGTTTCTAGATTTTCGCTATACAGATGGACTAGAATCTGTAGGTCTTTTCCCTCAAGGGCTTCATTCTTTGCCAATGGAACTAAGATATCTTCGTTGGGAATGTTATCCTTTTAAATCCTTGCCTGAGCAATTTTCTACTGAGAAACTTGTTGTATTAGACATGTCATATAGCCAAGTGGAAAAGCTTTGGTCTGGAGAGAAAAATCTGATGAAATTAAAAGAAATCATACTTCAACTTTGCCATTTAAAAGAGCTGCCAGACCTTTCAAACGCTGCAAATCTTAAAGTATTGGATGCGAGAGGTTGTTATCAGTTGACAAGTGTGAATCCATCTATTTTATCTCTCAACATGCTTGAGAAATTAGATCTATGGTACTGCATTTCCCTTACCAGACTTTCATGTGATTCCCACTCAAGCTCCCTTCGATATCTTAACCTTAAGGAATGCAAGAATCTAAGGGAATTCTCAGTGACATCAGAGAATATGATTGAACTTGATTTATCTTGCACTCAGGTCAATGCATTGCCCACAACTTTTGGATGTCAAAGAAAGCTTGAACACCTAAACCTTGCATTGAGTTACATTGAGAGCTTGCCTTCATCCATAAAAGATCTTACAAGACTGCAATATCTTAATATAAGTTATTGCGAGAAGCTTCAAATTCTTCCCGAGCTTCCCCCATCCCTTGAAACTCTACTTGTCAACGATTGCACATCGTTGAAGACTGTATTGTTCCCTTCAACAGTTGCTAAACAATTCAGTGAAAATAGGAAAAAGGTTGAGTTCTGGAATTGCTTGGACTTGGATGAACATTCTCTCATGGCTATTGGGTTGAATGCGCAAATCAACATGATGAAATTTGCATACCAACATTTATCAGCTTCAAAGCAAGATTACAACGAAAATTTTGGTGATCAAGCAATGTATTTGTATCCAGGAAGCAATATTCCAGAGTGGATGATGTATAAGACAACAGGGGATTATATAATTATTGATCATTCTTCTGCTCCATCATGTCCTATATCAGGCTTCATTTTCTGTTTCATCCTTGGCAGAGACGGGAGAAAATTTTGGTGTCATAAATTGCAATTTAACATCATTATTAGTGACGATGAAGGAAACAGGGACGTTATCAAAATAAACTCGTCTATGACATTTTTTCAGATTGTAGCAGATCATGTGTGTTTGATATATGACCAACGTTGTTCTTGTTCCCTAAATAGCATCACCAAAAATCTGCCAAAGTTTAAAATCAAGGCTACGGCATGGTTTACCTCCATATTCGAAGGTTTTGGTAGTCCAAACAGGGTGGTATTAAAAGGGTTTGGGGTCAGTCATGTAAATACTTCAGATTATCACAAGACCGTTCAACAAATGGATTAG 3231 0.3649 MAYSFAGASQIRYARQCWPSGNEALPKGIVARTSNLEMRLWDSGIYNRISKRPLNFLAIAKGGRKNKFVNKIVAKAEAGKPMSDNAPQIKYDVFVSFRGEDIRSGFLGHLSEAFSQKQIYAFIDEKLKKGDSVWPSLEKAIEGSFISLIIFSKNYASSSWCLKELVKILECRDKYKRIVIPVFYNVEPTVVRHQNKFYAIAFVFHQIKYGLSMVKLWKKALEDSSNLSGIKSTDFRNDAEMLDEIVKQVLMRFSKHPINMKGLIGIGKPISDIESLLCQESKDVRVIGIWGMGGIGKTTIAEEVFNKLYSKYEGCCFLANVREELRRNGIISLKEQVFSTLLGEVVKINTPNGLSDYIKRRIGRQKVLIILDDVNDSDQIEILLGTRDWFGGGSRIIITTRDKRVLIANRVDDIYKVDVLSSSDALKLFNLKAFDQNQIKVEYHELSKRVVNYAKGIPLVLEVLGRLLCGKDKVAWESQLEILEKMPIKKVYDIMRLSYDDLDRKEQKVFLDVAYQESDNSVAVVLERLEDRALVSISKHNVVSMHDIIQEMAWEIVRQESSESGRHSRLGDPDEIYEVLKNDKGMEDIRSIKSHLPAVKKLMLCPNIFAKMRKLLFLDFRYTDGLESVGLFPQGLHSLPMELRYLRWECYPFKSLPEQFSTEKLVVLDMSYSQVEKLWSGEKNLMKLKEIILQLCHLKELPDLSNAANLKVLDARGCYQLTSVNPSILSLNMLEKLDLWYCISLTRLSCDSHSSSLRYLNLKECKNLREFSVTSENMIELDLSCTQVNALPTTFGCQRKLEHLNLALSYIESLPSSIKDLTRLQYLNISYCEKLQILPELPPSLETLLVNDCTSLKTVLFPSTVAKQFSENRKKVEFWNCLDLDEHSLMAIGLNAQINMMKFAYQHLSASKQDYNENFGDQAMYLYPGSNIPEWMMYKTTGDYIIIDHSSAPSCPISGFIFCFILGRDGRKFWCHKLQFNIIISDDEGNRDVIKINSSMTFFQIVADHVCLIYDQRCSCSLNSITKNLPKFKIKATAWFTSIFEGFGSPNRVVLKGFGVSHVNTSDYHKTVQQMD* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0787 1076 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 86 1075 - -
Apr10g0787 1076 PRINTS Disease resistance protein signature 286 301 - -
Apr10g0787 1076 PRINTS Disease resistance protein signature 361 375 - -
Apr10g0787 1076 PRINTS Disease resistance protein signature 454 468 - -
Apr10g0787 1076 PRINTS Disease resistance protein signature 752 768 - -
Apr10g0787 1076 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 86 1075 IPR044974 GO:0006952
Apr10g0787 1076 SMART till_3 90 227 IPR000157 GO:0007165
Apr10g0787 1076 SUPERFAMILY "Winged helix" DNA-binding domain 489 580 IPR036390 -
Apr10g0787 1076 Pfam Protein of unknown function (DUF707) 17 76 IPR007877 -
Apr10g0787 1076 Gene3D - 88 249 IPR035897 -
Apr10g0787 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 512 IPR027417 -
Apr10g0787 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 87 229 IPR035897 -
Apr10g0787 1076 Pfam NB-ARC domain 275 500 IPR002182 GO:0043531
Apr10g0787 1076 Pfam TIR domain 90 252 IPR000157 GO:0007165
Apr10g0787 1076 Gene3D - 250 413 IPR027417 -
Apr10g0787 1076 Gene3D Ribonuclease Inhibitor 752 889 IPR032675 -
Apr10g0787 1076 Gene3D - 419 503 IPR042197 -
Apr10g0787 1076 SUPERFAMILY L domain-like 602 857 - -
Apr10g0787 1076 ProSiteProfiles TIR domain profile. 89 253 IPR000157 GO:0007165
Apr10g0787 1076 Gene3D Ribonuclease Inhibitor 575 743 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0787 Apr-Chr10 19671850 19678357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0787 62 866 WRKY Transcription Factor Family AT4G12020 33.094 1.48e-98 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0787 - - aprc:113850949 1271.91