Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0786 ATGACACTCTCTTTCTTTCTCATTCTTATAATATTTCACTTTCTCCTCAGCTTCGCACTTTCTCTCTCCTCCGACGGCCTCGCCCTTCTCGCTCTAAAATCCGCCGTCGACCAATCCTCCGCCGCCGCCGTCTTTTCCGACTGGAACGACGGCGACTTGACCCCTTGCTCCTGGTCTGGAATTTCCTGCGCTAACATCTCCGGCCAGCCGGAGCCGCGCGTGGTCGGAATCTCCCTCGCTGGAAAGTCCCTCGCCGGTTACATTCCCTCGGAGCTAGGCACACTTCGCTTTCTCCGGCGACTCAACCTCCACGACAACGACTTCTCCGGCGTTCTCCCGGTGCAACTCTCCAACGCCACCGCGCTTCACAGCCTCTTCCTCCACCGCAACAACCTCTCCGGTCCCTTCCCTCACTCACTCTGCACCCTCCCACGCCTCCAGAACGTCGACCTCTCCGACAATGCCTTCTCTGGCCACATCCCTAGCGACCTCAAAAACTGCAAGAACCTCCAACGGCTCATTCTCGCCGTGAACAAATTTTCCGGCGAGATTCCTACCGGCGTGTGGCCGGAATTGCGAAACCTCCTTCAACTCGACCTCTCGGCGAACGACCTAGAAGGTTCGATCCCTAACGACATCGGAACCCTCGGTTCCCTCTCCGGCACGCTGAACCTCTCGTTCAACCACCTCTCCGGTAGGGTTCCGTCGTCTCTAGGGAAATTACCGGCGACGGTTAGCTTCGACCTCAGAAACAACAATTTCAGCGGTGAAATTCCGCAAACGGGGTCGTTTTCGAACCAAGGTCCTACCGCGTTCCTCGGAAACCCCAATTTATGTGGGTTCCCTCTTAGAAAATCATGTTCCGGTTCAGACCGGGACTTTTCACCCGGTTCGCGTGATGACACGCGCGAGCCGAGTAAACCGGGTTCAGGTCTAAGACCCGGTTTAATAATTTTAATTTCGGTGGCTGATGCTGTTGGTGTTGCTTTAATTGGACTTGTTATTGTTTATGTTTATTGGAAGAAAAAAGATGATTCTAATGCTTGTAGTTGTGTTGGGGAGAGCAAGTTTGGTGATGAAAAAGGGAATGTGTGTGTGTGTGGATTTCCATGTGTGAGTGGTTCCAAGAGTGAGGATGATGAGTATGAGGTGGAAGGGGGTGAAGAAGGGGAAGGGGAAGGAGAATTGGTGAGGATTGATAAGGGTTTGAGCTTTGAGCTTGATGAGCTTTTGAGAGCTTCAGCATATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTATAAGGTGGTGTTGGGGAATGGGGTGCCTGTGGCTGTGAGGAGGTTAGGGGAAGGTGGGGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAGGCTATTGGGAAGGTGAGGCATCCTAATATTGTGAGGTTGAGGGCTTATTATTGGGCACATGACGAGAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATTTGGCCAATGCCCTGAGAGGGAGGAATGGCCAACCATCTTCAAACCTTTCATGGTCCACCAGGCTGAGAATCGCCAAAGGAACAGCCAGGGGCTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTCGTCCATGGTGACATCAAACCTTCCAACATCCTACTTGACAATGACTTCCAACCCTACATTTCTGATTTTGGTCTTAACCGCCTAATCAGCATCACTGGCAACAACCCCTCCACTGGTGGACTCATGGGTGGAGCTCTTCCTTACATGAAGTCATCACAAAAAGACAGAACCAACAACAATTACAAAGCCCCTGAGGCTCGTGTCCCTGGCTGCAGACCCACCCAAAAATGGGATGTGTACTCATTTGGTGTTGTGTTGCTCGAAATACTAACTGGGAGGTCACCAGAATCATCTCCCACCACATCAACTTCTATGGAAGTCCCTGACTTGGTAAGGTGGGTAAGAAAAGGGTTTGATCAAGAAAGCCCTTTATCTGAAATGGTTGATCCATCACTTCTCCAAGAGGTGCGTGCCAAGAAAGAGGTGCTGGCTGTGTTTCATGTAGCACTAGCATGCACTGAAGGAGACCCTGAGGTCCGGCCTAGAATGAAAACTGTCTCTGAAAACCTTGATAAGATTGGAACATAA 2133 0.5096 MTLSFFLILIIFHFLLSFALSLSSDGLALLALKSAVDQSSAAAVFSDWNDGDLTPCSWSGISCANISGQPEPRVVGISLAGKSLAGYIPSELGTLRFLRRLNLHDNDFSGVLPVQLSNATALHSLFLHRNNLSGPFPHSLCTLPRLQNVDLSDNAFSGHIPSDLKNCKNLQRLILAVNKFSGEIPTGVWPELRNLLQLDLSANDLEGSIPNDIGTLGSLSGTLNLSFNHLSGRVPSSLGKLPATVSFDLRNNNFSGEIPQTGSFSNQGPTAFLGNPNLCGFPLRKSCSGSDRDFSPGSRDDTREPSKPGSGLRPGLIILISVADAVGVALIGLVIVYVYWKKKDDSNACSCVGESKFGDEKGNVCVCGFPCVSGSKSEDDEYEVEGGEEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVRHPNIVRLRAYYWAHDEKLLISDFISNGNLANALRGRNGQPSSNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLNRLISITGNNPSTGGLMGGALPYMKSSQKDRTNNNYKAPEARVPGCRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVRWVRKGFDQESPLSEMVDPSLLQEVRAKKEVLAVFHVALACTEGDPEVRPRMKTVSENLDKIGT* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0786 710 SUPERFAMILY Protein kinase-like (PK-like) 417 704 IPR011009 -
Apr10g0786 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Apr10g0786 710 Gene3D Ribonuclease Inhibitor 22 189 IPR032675 -
Apr10g0786 710 Gene3D Phosphorylase Kinase; domain 1 404 487 - -
Apr10g0786 710 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Apr10g0786 710 CDD STKc_IRAK 418 708 - -
Apr10g0786 710 Pfam Protein kinase domain 417 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0786 710 SUPERFAMILY L domain-like 23 284 - -
Apr10g0786 710 MobiDBLite consensus disorder prediction 289 309 - -
Apr10g0786 710 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 710 - -
Apr10g0786 710 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 4 710 - -
Apr10g0786 710 ProSiteProfiles Protein kinase domain profile. 412 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0786 710 SMART serkin_6 416 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0786 710 Gene3D Transferase(Phosphotransferase) domain 1 488 710 - -
Apr10g0786 710 Gene3D Ribonuclease Inhibitor 190 289 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0786 Apr-Chr10 19635446 19639106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0786 19 708 Receptor kinase-like Gene Family AT1G67510 69.155 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr10g0786 Pkinase 6.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0786 - - var:108346287 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2078 4 29664593 29669275 Apr10g0786 10 19635446 19639106 PCT