Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g0786 | ATGACACTCTCTTTCTTTCTCATTCTTATAATATTTCACTTTCTCCTCAGCTTCGCACTTTCTCTCTCCTCCGACGGCCTCGCCCTTCTCGCTCTAAAATCCGCCGTCGACCAATCCTCCGCCGCCGCCGTCTTTTCCGACTGGAACGACGGCGACTTGACCCCTTGCTCCTGGTCTGGAATTTCCTGCGCTAACATCTCCGGCCAGCCGGAGCCGCGCGTGGTCGGAATCTCCCTCGCTGGAAAGTCCCTCGCCGGTTACATTCCCTCGGAGCTAGGCACACTTCGCTTTCTCCGGCGACTCAACCTCCACGACAACGACTTCTCCGGCGTTCTCCCGGTGCAACTCTCCAACGCCACCGCGCTTCACAGCCTCTTCCTCCACCGCAACAACCTCTCCGGTCCCTTCCCTCACTCACTCTGCACCCTCCCACGCCTCCAGAACGTCGACCTCTCCGACAATGCCTTCTCTGGCCACATCCCTAGCGACCTCAAAAACTGCAAGAACCTCCAACGGCTCATTCTCGCCGTGAACAAATTTTCCGGCGAGATTCCTACCGGCGTGTGGCCGGAATTGCGAAACCTCCTTCAACTCGACCTCTCGGCGAACGACCTAGAAGGTTCGATCCCTAACGACATCGGAACCCTCGGTTCCCTCTCCGGCACGCTGAACCTCTCGTTCAACCACCTCTCCGGTAGGGTTCCGTCGTCTCTAGGGAAATTACCGGCGACGGTTAGCTTCGACCTCAGAAACAACAATTTCAGCGGTGAAATTCCGCAAACGGGGTCGTTTTCGAACCAAGGTCCTACCGCGTTCCTCGGAAACCCCAATTTATGTGGGTTCCCTCTTAGAAAATCATGTTCCGGTTCAGACCGGGACTTTTCACCCGGTTCGCGTGATGACACGCGCGAGCCGAGTAAACCGGGTTCAGGTCTAAGACCCGGTTTAATAATTTTAATTTCGGTGGCTGATGCTGTTGGTGTTGCTTTAATTGGACTTGTTATTGTTTATGTTTATTGGAAGAAAAAAGATGATTCTAATGCTTGTAGTTGTGTTGGGGAGAGCAAGTTTGGTGATGAAAAAGGGAATGTGTGTGTGTGTGGATTTCCATGTGTGAGTGGTTCCAAGAGTGAGGATGATGAGTATGAGGTGGAAGGGGGTGAAGAAGGGGAAGGGGAAGGAGAATTGGTGAGGATTGATAAGGGTTTGAGCTTTGAGCTTGATGAGCTTTTGAGAGCTTCAGCATATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTATAAGGTGGTGTTGGGGAATGGGGTGCCTGTGGCTGTGAGGAGGTTAGGGGAAGGTGGGGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAGGCTATTGGGAAGGTGAGGCATCCTAATATTGTGAGGTTGAGGGCTTATTATTGGGCACATGACGAGAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATTTGGCCAATGCCCTGAGAGGGAGGAATGGCCAACCATCTTCAAACCTTTCATGGTCCACCAGGCTGAGAATCGCCAAAGGAACAGCCAGGGGCTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTCGTCCATGGTGACATCAAACCTTCCAACATCCTACTTGACAATGACTTCCAACCCTACATTTCTGATTTTGGTCTTAACCGCCTAATCAGCATCACTGGCAACAACCCCTCCACTGGTGGACTCATGGGTGGAGCTCTTCCTTACATGAAGTCATCACAAAAAGACAGAACCAACAACAATTACAAAGCCCCTGAGGCTCGTGTCCCTGGCTGCAGACCCACCCAAAAATGGGATGTGTACTCATTTGGTGTTGTGTTGCTCGAAATACTAACTGGGAGGTCACCAGAATCATCTCCCACCACATCAACTTCTATGGAAGTCCCTGACTTGGTAAGGTGGGTAAGAAAAGGGTTTGATCAAGAAAGCCCTTTATCTGAAATGGTTGATCCATCACTTCTCCAAGAGGTGCGTGCCAAGAAAGAGGTGCTGGCTGTGTTTCATGTAGCACTAGCATGCACTGAAGGAGACCCTGAGGTCCGGCCTAGAATGAAAACTGTCTCTGAAAACCTTGATAAGATTGGAACATAA | 2133 | 0.5096 | MTLSFFLILIIFHFLLSFALSLSSDGLALLALKSAVDQSSAAAVFSDWNDGDLTPCSWSGISCANISGQPEPRVVGISLAGKSLAGYIPSELGTLRFLRRLNLHDNDFSGVLPVQLSNATALHSLFLHRNNLSGPFPHSLCTLPRLQNVDLSDNAFSGHIPSDLKNCKNLQRLILAVNKFSGEIPTGVWPELRNLLQLDLSANDLEGSIPNDIGTLGSLSGTLNLSFNHLSGRVPSSLGKLPATVSFDLRNNNFSGEIPQTGSFSNQGPTAFLGNPNLCGFPLRKSCSGSDRDFSPGSRDDTREPSKPGSGLRPGLIILISVADAVGVALIGLVIVYVYWKKKDDSNACSCVGESKFGDEKGNVCVCGFPCVSGSKSEDDEYEVEGGEEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVRHPNIVRLRAYYWAHDEKLLISDFISNGNLANALRGRNGQPSSNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLNRLISITGNNPSTGGLMGGALPYMKSSQKDRTNNNYKAPEARVPGCRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVRWVRKGFDQESPLSEMVDPSLLQEVRAKKEVLAVFHVALACTEGDPEVRPRMKTVSENLDKIGT* | 711 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g0786 | 710 | SUPERFAMILY | Protein kinase-like (PK-like) | 417 | 704 | IPR011009 | - | |
Apr10g0786 | 710 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 535 | 547 | IPR008271 | GO:0004672|GO:0006468 | |
Apr10g0786 | 710 | Gene3D | Ribonuclease Inhibitor | 22 | 189 | IPR032675 | - | |
Apr10g0786 | 710 | Gene3D | Phosphorylase Kinase; domain 1 | 404 | 487 | - | - | |
Apr10g0786 | 710 | Pfam | Leucine rich repeat N-terminal domain | 23 | 63 | IPR013210 | - | |
Apr10g0786 | 710 | CDD | STKc_IRAK | 418 | 708 | - | - | |
Apr10g0786 | 710 | Pfam | Protein kinase domain | 417 | 641 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g0786 | 710 | SUPERFAMILY | L domain-like | 23 | 284 | - | - | |
Apr10g0786 | 710 | MobiDBLite | consensus disorder prediction | 289 | 309 | - | - | |
Apr10g0786 | 710 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 4 | 710 | - | - | |
Apr10g0786 | 710 | PANTHER | RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 | 4 | 710 | - | - | |
Apr10g0786 | 710 | ProSiteProfiles | Protein kinase domain profile. | 412 | 708 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g0786 | 710 | SMART | serkin_6 | 416 | 708 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr10g0786 | 710 | Gene3D | Transferase(Phosphotransferase) domain 1 | 488 | 710 | - | - | |
Apr10g0786 | 710 | Gene3D | Ribonuclease Inhibitor | 190 | 289 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g0786 | Apr-Chr10 | 19635446 | 19639106 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g0786 | 19 | 708 | Receptor kinase-like Gene Family | AT1G67510 | 69.155 | 0.0 | 959 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Apr10g0786 | Pkinase | 6.8e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g0786 | - | - | var:108346287 | 1182.16 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr4g2078 | 4 | 29664593 | 29669275 | Apr10g0786 | 10 | 19635446 | 19639106 | PCT |