Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0785 ATGACTTTACACTCCTCACTTTGTTTCTACTCTCCAATCCGTCGCTGCTCCACCTCTTTCTCCAATTTCGTGGATTGTGAGTTGGGAGAGAAGATGAAGCAAGTGGTGGGAATGGTGGTTTCAAATAAGATGCAGAAATCGGTGGTGGTGGCAGTGGATAGACTATTCTTCCACAAAGTGTACAACCGATATATCAAGCGCACTTCAAAATTTATGGCTCATGATGAGCAAAATAGTTGTAACATTGGTGACCGAGTTCGACTGGATCCTTCTAGGCCTTTGAGCAAGCGTAAACATTGGGTGGTTGCAGAAATTCTCAAGAAGGCGCGCATATATGTTCCACCCTCCATGCCAGCATTTGATAAGGCGAGGTCCAGCACTGAAGCTCCTGCTTCCTGA 399 0.4586 MTLHSSLCFYSPIRRCSTSFSNFVDCELGEKMKQVVGMVVSNKMQKSVVVAVDRLFFHKVYNRYIKRTSKFMAHDEQNSCNIGDRVRLDPSRPLSKRKHWVVAEILKKARIYVPPSMPAFDKARSSTEAPAS* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0785 132 PRINTS Ribosomal protein S17 family signature 51 74 IPR000266 GO:0003735|GO:0005840|GO:0006412
Apr10g0785 132 PRINTS Ribosomal protein S17 family signature 83 93 IPR000266 GO:0003735|GO:0005840|GO:0006412
Apr10g0785 132 PRINTS Ribosomal protein S17 family signature 93 100 IPR000266 GO:0003735|GO:0005840|GO:0006412
Apr10g0785 132 SUPERFAMILY Nucleic acid-binding proteins 32 117 IPR012340 -
Apr10g0785 132 Hamap 30S ribosomal protein S17 [rpsQ]. 32 107 IPR019984 GO:0003735|GO:0005840|GO:0006412
Apr10g0785 132 Gene3D - 23 110 IPR012340 -
Apr10g0785 132 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 32 122 IPR000266 GO:0003735|GO:0005840|GO:0006412
Apr10g0785 132 PANTHER 37S RIBOSOMAL PROTEIN S17, MITOCHONDRIAL 32 122 - -
Apr10g0785 132 Pfam Ribosomal protein S17 37 104 IPR000266 GO:0003735|GO:0005840|GO:0006412
Apr10g0785 132 TIGRFAM uS17_bact: ribosomal protein uS17 33 102 IPR019984 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0785 37 106 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 39.726 3.51e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0785 K02961 - gmx:100794499 171.785