Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0775 ATGATGCAACCTGAGATTCTTGAGTCTCCATGGTCATCATTCTACTTAGATAAAAGCTCAAATTTTGATCATCAAATTGAGCACTATGGCTTCCAGGTGGATGCACATATGGGTGATTCAGAATTCAATTCTCTATTCAGCACTCCAGAAGACACTTCCTCTGAAGTTTCTTCATTCCCTATACCTTCCAAAATGTTCATAAATGATCAATTTTTCCACGAACCACTTGACAAAGACCCTCTTCAACTCCCAACACTAATGGATGTCTATGATTTGTCTGTGGAATTGGACGACTATGATCTCATCATGAGGGATCATCAAGTTGTGGGTATTCAAGGGTACTCAAAGGAAAGTGAAGGAGAAAATTCTTTGAGTAATTGGAGTCCATCCCCCTCTATGAATTCAGATTTGTCCTCAGATCAAAAACCATTGACCTTGCCTCAACAAGGCATCGAAATTGAAAACCAAGTAAGTCTTCCACATATGTTGGAGGCCTTGGGAGAAGCCATGTATAAAGGGCATAAAGAACTTGTAGAAGTGATCTCAAGATGCATGAAGCAGAAAGTTAGTCCAATTGCTGAAAAACCTCTCGCACGCCTTGCTTTCTACTTGTGCGAAGACATCACAACAAAGCAAGGGGATTGTTATCTCACACATGAGGCATCCAAGAACTTTGAAGCAGCATTTAGGGCTTTCTACCAAGGCCTCCCACATGGAAAAGTTGCTCACTTTGTGGCTAATTTGGCAATTCTTGAAGCTATGCCACAAGATGTTGAAGTCATACATATAGTGGATTTTGATATGGGAGAAGGGTCTCAATGGCCTCCAATGATTGAGGCCCTTGCAACCCTAAATAAAACATTGAAGTTGACGTCAATTAAATGGGGAGAGGAAAGTTTTGAATGTGCTTCCTCTCCATGGAAGTATGAGGAAATTAGAAGGGAGCTCTTCGAGTATGCTAGATCATGTGGGTTGAAGTTGAAAATGGAAGAAAAAGGAATGGGGGAATTGGGTTCTGAGCTTAAGAGAATGAACAAAAGAAGTGGAAGGGGGGAATTTTTGGCCTTCAATTGCATGGTAGGTTTTCCACATATGGGAAGAGGAAGGAGTAGAAGACTTGTCATGGAGTTTCTAAATTTGATCAAGAGTTGTGGCAACAAGGGAATTGTCATTGTTGGGGATGGGAGAGTTTGTGAGAAGATGAAAAATGAATTGGAATTCAAGCCATTTTTTGATGGGCATTTGCTACATTACCAGGCCTTATTGGAATCAATTGAATCACACTTCCCAACTTGTTTGTTATATGCAAGAACTGCCATTGAATGCCTATTTGTGGCACCTTATGTCTCTTCTCTTGCTTGGTTGCAAAAGTGGGAAGAGATTAGAGAGGATTGCCATCTTGAGGCAGAGATTGGCTTAGAGGGATGCAAATTGAACAAAACAATTTTAATGGAAGTCAAAGAGATGTTGAGTGGAAGTGATGGTTCATATCAGGCTAAGATTGAAGGACATACTGACAATGAATTGGTTTTGGAATGGAAAGGAACCCAGCTAGTAAGAGTTTCCAGTTGGCGAAATTAA 1581 0.4054 MMQPEILESPWSSFYLDKSSNFDHQIEHYGFQVDAHMGDSEFNSLFSTPEDTSSEVSSFPIPSKMFINDQFFHEPLDKDPLQLPTLMDVYDLSVELDDYDLIMRDHQVVGIQGYSKESEGENSLSNWSPSPSMNSDLSSDQKPLTLPQQGIEIENQVSLPHMLEALGEAMYKGHKELVEVISRCMKQKVSPIAEKPLARLAFYLCEDITTKQGDCYLTHEASKNFEAAFRAFYQGLPHGKVAHFVANLAILEAMPQDVEVIHIVDFDMGEGSQWPPMIEALATLNKTLKLTSIKWGEESFECASSPWKYEEIRRELFEYARSCGLKLKMEEKGMGELGSELKRMNKRSGRGEFLAFNCMVGFPHMGRGRSRRLVMEFLNLIKSCGNKGIVIVGDGRVCEKMKNELEFKPFFDGHLLHYQALLESIESHFPTCLLYARTAIECLFVAPYVSSLAWLQKWEEIREDCHLEAEIGLEGCKLNKTILMEVKEMLSGSDGSYQAKIEGHTDNELVLEWKGTQLVRVSSWRN* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0775 526 MobiDBLite consensus disorder prediction 113 143 - -
Apr10g0775 526 MobiDBLite consensus disorder prediction 116 143 - -
Apr10g0775 526 Pfam GRAS domain family 162 525 IPR005202 -
Apr10g0775 526 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 525 IPR005202 -
Apr10g0775 526 ProSiteProfiles GRAS family profile. 150 525 IPR005202 -
Apr10g0775 526 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 23 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0775 Apr-Chr10 19420224 19421804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0775 227 525 GRAS Transcription Factor Family AT3G60630 27.445 2.51e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr10g0775 GRAS 1.3e-37 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0775 - - gmx:100791800 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0775 10 19420224 19421804 Apr10g0775 10 19420224 19421804 ECH