Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0774 ATGGCTCCAAAATCTCTAATTAGTTTCTTCATCTTTCTCATTCCCCTGGTTGCTGCCAAGGCTTTTACTTTCCAATTCCATGGTTTCAATAACAATGAAGAAAATCTCATCCTTGATGGGGATTCCAACATTGTCAAACCTCAAGTTGAATTTGACACAGTGAACGGCTACAGCGATGGTTTTGACAGAGAAGGGAACCATGTTGGGGTAAATTTAAATGGCATGTTATCAACCATATCTAAGCCAGCAGGTTACTTTGAAGAAGGCATGGATGAAAAGCAGGTAGACTTTAATATGGGCAAGGTTGATGCTGTATGTGCTTGGATAGAATATGATGATGAAACAAAATTTTTGAATGTAACAATTGCCCCTTTATCAGTGCCATCAAAACCTAGCAAACCCCTTATATCCAAAAGGATAGACCTTAGGCCTGTTATGAGGGAAAGCATGTATGTTGGTTTCTCAGCATCAACAGGTCAAAGGAAAGCAAGCTCTCACTATATTCTTGGGTGGAGCTTTTCAGTGAATGGTATTGCTCCTCCGCTCAACATTTCACAACTTCCAAAACCACCAAAGGAGAAAGATCCATATTCCGTTCCTTGGGTCATGGTTGCAATTGGCATCTTGTCTGCTTTGACTTTTACCTTATTGTGCTTTTTGTTTTTTCTCACAATCTATAAGAGATATGTGAGATTTGAAAAACTTGAGGACTGGGAGCTTGATTGTCCTCATAGGTTTAAATATAGAGATCTTCACATAGCAACAAAGGGGTTTCATGAGAGCCAGCTAATTGGAGTTGGAGGCTTTGGTTCTGTGTTCAAAGGGGTGTTACCAAGTACAGGAATTGAAGTTGCTGTTAAAAGGATCATGAATGGTCCATTGCAAGGAATGAGGGAGTTTGCAGCTGAGATTGAAAGCTTGGGAAGATTGAGGCACAAGAATTTGGTCAATCTTCAAGGTTGGTGTAAGCACAAGAATGATCTACTCCTAGTTTATGATTACATTCCAAATGGGAGCCTTGATTCTCTCCTATTCAACAAAAAAATTTCTCTGTCTTGGGACCAAAGATTCAACATTCTCAAAGGTGTAGCTGCAGGGCTCTTGTATCTTCATGAAGAGTGGGAACAAGTGGTGATCCATAGAGATGTGAAATCTAGCAATATTCTAATAGATGGGGATTTGAATGCTCATTTAGGTGACTTTGGACTAGCAAGGGTTTGTAGTCATAATCAAGTGTCACACACAACAAGTGTGGTTGGCACAATTGGGTACATTGCCCCAGAGTTAACTAGGACAGAAAAAGCATCTACAAGCTCTGATGTTTATGCATTTGGGGTCCTACTACTTGAAGTGGTTGCTGGAAGAAGACCTGTTGGCTCATCAGATAAATTTTTCTTGGTGGACTGGATCCTTGAAAATTACCAATTGGGTCAGATTCTTGAAGTAGTTGATCGTAAGCTAGGCTCAGTTTATGATGAGAAAGAAGTAGAGTTGGTTCTGACATTGGGTCTCCTTTGTACTCAATACAAAGATGATTGTAGACCCACCATGAAACAAGTGACTAGGTACCTAAACTTTGATGACCCTCTTCCTGATATTGCTGACTTGAGACACTATGATTCTCAAAGAAGCATAATAAGCTCAAGTTTCTCAGAAACCATGTCCACGGGTAAGATAAAGACTTCATCCTCATACAGTTTACCCTCCATTGGCGGGAGTACAAAGTCAATAGATATTGGTTCATAG 1746 0.4009 MAPKSLISFFIFLIPLVAAKAFTFQFHGFNNNEENLILDGDSNIVKPQVEFDTVNGYSDGFDREGNHVGVNLNGMLSTISKPAGYFEEGMDEKQVDFNMGKVDAVCAWIEYDDETKFLNVTIAPLSVPSKPSKPLISKRIDLRPVMRESMYVGFSASTGQRKASSHYILGWSFSVNGIAPPLNISQLPKPPKEKDPYSVPWVMVAIGILSALTFTLLCFLFFLTIYKRYVRFEKLEDWELDCPHRFKYRDLHIATKGFHESQLIGVGGFGSVFKGVLPSTGIEVAVKRIMNGPLQGMREFAAEIESLGRLRHKNLVNLQGWCKHKNDLLLVYDYIPNGSLDSLLFNKKISLSWDQRFNILKGVAAGLLYLHEEWEQVVIHRDVKSSNILIDGDLNAHLGDFGLARVCSHNQVSHTTSVVGTIGYIAPELTRTEKASTSSDVYAFGVLLLEVVAGRRPVGSSDKFFLVDWILENYQLGQILEVVDRKLGSVYDEKEVELVLTLGLLCTQYKDDCRPTMKQVTRYLNFDDPLPDIADLRHYDSQRSIISSSFSETMSTGKIKTSSSYSLPSIGGSTKSIDIGS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0774 581 SUPERFAMILY Protein kinase-like (PK-like) 242 534 IPR011009 -
Apr10g0774 581 Gene3D - 47 180 - -
Apr10g0774 581 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 21 556 - -
Apr10g0774 581 Gene3D Transferase(Phosphotransferase) domain 1 335 537 - -
Apr10g0774 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Apr10g0774 581 ProSiteProfiles Protein kinase domain profile. 258 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0774 581 ProSitePatterns Protein kinases ATP-binding region signature. 264 287 IPR017441 GO:0005524
Apr10g0774 581 PANTHER - 21 556 - -
Apr10g0774 581 CDD STKc_IRAK 264 525 - -
Apr10g0774 581 SMART serkin_6 258 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0774 581 MobiDBLite consensus disorder prediction 559 581 - -
Apr10g0774 581 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 280 IPR013320 -
Apr10g0774 581 Pfam Legume lectin domain 49 188 IPR001220 GO:0030246
Apr10g0774 581 Pfam Protein kinase domain 258 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0774 581 Gene3D Phosphorylase Kinase; domain 1 227 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0774 Apr-Chr10 19396141 19398479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0774 49 533 Receptor kinase-like Gene Family AT3G08870 54.032 1.40e-178 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr10g0774 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0774 - - gmx:100792854 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0774 10 19396141 19398479 Apr10g0774 10 19396141 19398479 ECH
Apr4g2065 4 29476195 29478370 Apr10g0774 10 19396141 19398479 PCT