Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0755 ATGGACATGGAGTTGGACGAAACTTGTGGACCCAAAGAGGGAAAGCCCATTTTGGTAATATTGGTGGGAGCGCCGGGGAGTGGCAAGTCCACTTTCTGCGAAGATGTTATGCGTTCTTCTACTCGCCCTTGGGTTCGCGTTTGCCAGGACACTATTGGGAATGGCAAAGCAGGAAATAAAGCTCAATGTCTAAGTAGTGCAGCTAGAGCATTGAAGGATGGGAAGAATGTTTTTATTGATAGATGCAATCTTGACAGAGAACAGCGCTCAGAATTTATAAAGCTTGGTGGTGGACACCAAATAGATGTGCACGCAGTTGTACTTGATCTTCCTGCTAAACTTTGTATTTCTCGATCTGTAAAACGAACTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAAAATAAAGAGCTGCCCAAGTTAAGTGAAGGCTTTAACCGGATAACATTTTGTCAAAGTGAGAGTGATGTCAAAGATGCTACTAATACGTATGCCACACTTGGGCCACTGGATAACCTTCCCCATGGCTGCTTTGGCCAGAAGAATCCAGATTCCAAAATTCAGGTTGGTATAATGAAGTTCCTAAAAAAAGCAGAGGTCCCATCTGATGGAACATCTAGAGAAAATAGGACTGGAAACTCTACTTCCCAGTCTCCTGGGAAAAATGACTCCTGCAGCAAAGATATGGAAAAAATTTCTTCAATTCCAAATAATGCCAAATTACATGCTTCTCCGGATGATACTCCCACTCTGGCATTTCCATCTATTTCAACAGCTGACTTCCAATTCAACCACGAGAAGGCAGCTGATATTATTGTTCAGAAGGTTGCTGAGTTCTCAAATAAGTTCAAGAATGCGAGACTTGTTCTAGTTGACCTGACACATAAGTCAAAGATTCTTTCCTTAGTTAAAGCCAAAGCAGCAGAAAAAAACATTGACACCCAAAAGTTCTTTACCCATGTTGGAGACATTACTCAACTATATACGGCAGGAGGTTTGCGCTGCAATGCCATAGCTAATGCTGCCAACTGGCGGTTGAAACCTGAAGGTGGAGGTGTTAATGCAGCAATTTTCAAAGCTGCAGGTCCTGAGCTGGAGTCTGCAACCAAAGAAAAAGTAAAATCTCTTTCCCCTGGGAATGCTGTTGTTGTGCCCCTGCCTTCATCTTCTCCTTTGTTCGCTAGAGAGGGTGTAACTCACATAATACATGTTCTTGGACCTAATATGAACCCACAAAGACCAAATTGTCTAAACAATGATTATAATAAAGGCTGCAAAATTCTTCAAGATGCTTATGCTTCACTATTTGAAGGTTTTGCATCAATTGTGAGAAAGCTGGCAGAGGAACCTGGGCTTAGAAATGAAAACCTTGAAAAGAAGTCTTTGGACATGCAGGATCAATCTGAATTTTCCAGAAATAATTTCACAAATACTGATCAAAAGAGTAAGAGAGATGCTGATCAAGGATCGGAAAAAAACAAGAAATACAAGGGAACCAAGGACGGTTTTGGATTGACCTTTACTGATTCAAGGGATCCAAAGGTAGATTCAGAGCATAGAGGAACTGTTGGGAGTATGAACAAGGCATGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCAATGCATCCTGAAAAGCACAAGGATGACTTGCTTGAAATTTCAGAAGATGTTGTTGTATTGAATGATATGTACCCTAAGGCACAGAAGCATGTTCTGGTGTTGGCACGAATTGTAGGTCTTGATTGCCTGGCAGATGTCCAAAACGAGCACGCACAGTTATTGAAGAAGATGCATGCTGTAGGTTTAAAGTGGGCTGACAAGTTCTTGCATGAGAATGCTTCTCTGGTATTTCGCCTAGGATATCACTCGGCTCCATCAATGCGACAACTACATTTACATGTTATTAGCCAGGACTTCGAATCAAAACATTTAAAGAATAAGAAGCACTGGAACTCATTTAACACTGCTTTCTTTCGAGACTCAGTAGATGTAATTGATGAGATCTCTAATCATGGGAAAGCAACATTGAAAGATGATGACAAGCTGCTGTCCATGGAGTTGAGGTGCCACAGATGTAGAAGTGCGCATCCAAACATACCCCGGTTAAAATCACATATTAGCAGCTGCCAATCCCCCTTTCCTGCTAGCTTACTTCAAAATGGACGTTTGGTGCATGCACCAGGGGAACCTTGCAACAGGTTGTAG 2235 0.4215 MDMELDETCGPKEGKPILVILVGAPGSGKSTFCEDVMRSSTRPWVRVCQDTIGNGKAGNKAQCLSSAARALKDGKNVFIDRCNLDREQRSEFIKLGGGHQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQNKELPKLSEGFNRITFCQSESDVKDATNTYATLGPLDNLPHGCFGQKNPDSKIQVGIMKFLKKAEVPSDGTSRENRTGNSTSQSPGKNDSCSKDMEKISSIPNNAKLHASPDDTPTLAFPSISTADFQFNHEKAADIIVQKVAEFSNKFKNARLVLVDLTHKSKILSLVKAKAAEKNIDTQKFFTHVGDITQLYTAGGLRCNAIANAANWRLKPEGGGVNAAIFKAAGPELESATKEKVKSLSPGNAVVVPLPSSSPLFAREGVTHIIHVLGPNMNPQRPNCLNNDYNKGCKILQDAYASLFEGFASIVRKLAEEPGLRNENLEKKSLDMQDQSEFSRNNFTNTDQKSKRDADQGSEKNKKYKGTKDGFGLTFTDSRDPKVDSEHRGTVGSMNKAWGSWAQALHQIAMHPEKHKDDLLEISEDVVVLNDMYPKAQKHVLVLARIVGLDCLADVQNEHAQLLKKMHAVGLKWADKFLHENASLVFRLGYHSAPSMRQLHLHVISQDFESKHLKNKKHWNSFNTAFFRDSVDVIDEISNHGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQSPFPASLLQNGRLVHAPGEPCNRL* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0755 744 SUPERFAMILY Macro domain-like 233 301 IPR043472 -
Apr10g0755 744 Gene3D - 5 175 IPR027417 -
Apr10g0755 744 Gene3D Leucine Aminopeptidase, subunit E, domain 1 222 305 IPR043472 -
Apr10g0755 744 SUPERFAMILY Macro domain-like 307 445 IPR043472 -
Apr10g0755 744 Pfam C2HE / C2H2 / C2HC zinc-binding finger 664 717 IPR032566 -
Apr10g0755 744 PANTHER APRATAXIN-RELATED 15 738 - -
Apr10g0755 744 MobiDBLite consensus disorder prediction 465 530 - -
Apr10g0755 744 Pfam Scavenger mRNA decapping enzyme C-term binding 548 659 - -
Apr10g0755 744 Pfam AAA domain 18 145 - -
Apr10g0755 744 PANTHER APRATAXIN 15 738 IPR026963 GO:0003677|GO:0006281|GO:0033699
Apr10g0755 744 SUPERFAMILY HIT-like 533 703 IPR036265 -
Apr10g0755 744 ProSiteProfiles Macro domain profile. 313 513 IPR002589 -
Apr10g0755 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 161 IPR027417 -
Apr10g0755 744 Gene3D Leucine Aminopeptidase, subunit E, domain 1 306 452 IPR043472 -
Apr10g0755 744 MobiDBLite consensus disorder prediction 214 239 - -
Apr10g0755 744 Pfam Macro domain 348 423 IPR002589 -
Apr10g0755 744 ProSitePatterns HIT domain signature. 628 646 IPR019808 -
Apr10g0755 744 MobiDBLite consensus disorder prediction 208 239 - -
Apr10g0755 744 SMART YBR022w_8 325 470 IPR002589 -
Apr10g0755 744 Gene3D - 541 722 IPR036265 -
Apr10g0755 744 MobiDBLite consensus disorder prediction 487 508 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0755 7 734 C2H2 Transcription Factor Family AT5G01310 60.577 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0755 K10863 - gmx:100786762 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0755 10 19008649 19013729 Apr10g0755 10 19008649 19013729 ECH