Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0740 ATGGCAAAACTAGAAAAACCAAAACATGGGTGTTTCTCTAGTTTCTTACGTGTGTTTCTTTGTGCTGGAAATGCAACTAGTCCTCCAGTGCATCCATCAGATCATGTCACTGAATCAGATGAAAAAAAACAAAAGGTGCATCATTCTAACAAAGAAACACTGGTTGGTGATGATGGAGCTACTCCTGGAGTAGTGGCAAGGTTAATGGGGTTAGATTCATTGCCAAAGTCCAAATGGGTTGTGAATGGAACCACCCCAGATTGTGTTCCCAGAAGCAGGTCAGTGAATTTTGTGGATTACATGCTTGAGTTTGATTTAGGCCATGCAGAGCATCGTAGAGTGAAGACCTCAGCATCATTCAGAGAAGTTCCTGGTTTGGTTCAGAGGCCAAAAAAATGTGATAATTTTGTGCTTTACATGGATGGTAAAGTGTGTGAAGACCAGGAAGATGGACCTGAGTTGAAGAAATTGGAAATGGGTTTGGGAGATTTGAGGCTAAGGAAGAGGCATAGGAGTAGGAACAAGGAGATTGTGAGTGCGAAGAAGGAGAGGAATCAAGGGAAGAACAAGAAAATTTCCAAGTTGAAGAATGAACCAAGAAGGGTCCCTTCTTCTAAGCATAGCTCAAAGGGTCTAAATCTTGGTGAATCCTCACGCTCCTCCAAGAGTTGTAGTTATAGATGTAGTGGTGCTACTTCAAGCTCAAGGTTAAAAGTGAATTCTTTGCAAAATAAGCAAAAGAAAGGGTTTGTTGAGCCAAAAATGAGAAAGAACGTGAGAACCCAGCAGCCACTATTGACGATAGAGAGTGAATACGGCTTGGAAAATCACAGCCCAGTTTCAGTTCTTGATAGCAATGTCTATGCTTTCCTTTGTGGGACTGATTCTCTAGATGGCACGAGTCCCATAGCTTCAAAATCGAAGTGGGAATCTTCATCACTGTTGTCCTTGAGTGATGGTGTTGAAGAGAGAGCAAGTACAAATAATGGTTATGCCTGCACTGATGCCAACAAGGAAGCAGAGTATTACTCAGAACTAATGCTAAAGCTTAGTACTTTGACAAAACAGGATATAGGAGAGTTAGATTGCACGTTAAAACGTATATGTGGGAGTGAAAGCTTTGAGGAAATTTGTTTGGTGTTTGAGCATAAAATTTTCGACCTTTTATTGTATGAGGTCGTCAATGAAGTTTTACAAGTTTATTGTTGA 1209 0.4078 MAKLEKPKHGCFSSFLRVFLCAGNATSPPVHPSDHVTESDEKKQKVHHSNKETLVGDDGATPGVVARLMGLDSLPKSKWVVNGTTPDCVPRSRSVNFVDYMLEFDLGHAEHRRVKTSASFREVPGLVQRPKKCDNFVLYMDGKVCEDQEDGPELKKLEMGLGDLRLRKRHRSRNKEIVSAKKERNQGKNKKISKLKNEPRRVPSSKHSSKGLNLGESSRSSKSCSYRCSGATSSSRLKVNSLQNKQKKGFVEPKMRKNVRTQQPLLTIESEYGLENHSPVSVLDSNVYAFLCGTDSLDGTSPIASKSKWESSSLLSLSDGVEERASTNNGYACTDANKEAEYYSELMLKLSTLTKQDIGELDCTLKRICGSESFEEICLVFEHKIFDLLLYEVVNEVLQVYC* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0740 402 MobiDBLite consensus disorder prediction 28 59 - -
Apr10g0740 402 PANTHER OS05G0128300 PROTEIN 1 401 - -
Apr10g0740 402 PANTHER ALC-INTERACTING PROTEIN 1 1 401 - -
Apr10g0740 402 Coils Coil 178 198 - -
Apr10g0740 402 MobiDBLite consensus disorder prediction 206 225 - -
Apr10g0740 402 MobiDBLite consensus disorder prediction 165 225 - -
Apr10g0740 402 MobiDBLite consensus disorder prediction 176 205 - -
Apr10g0740 402 MobiDBLite consensus disorder prediction 34 54 - -
Apr10g0740 402 Pfam DUF761-associated sequence motif 61 78 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0740 Apr-Chr10 18755242 18757294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0740 1 397 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 27.617 3.52e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0740 - - gmx:102668583 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0740 10 18755242 18757294 Apr10g0740 10 18755242 18757294 ECH