Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0739 ATGGAGGGCAATCATCTCCATCACCACCACCACCAACATCATCTACAACAACAGCAGAACCACCTTCAACTTCAGAACATCACAAGTGTTAACGTTGATATCATTGACAGGTTCCCCCAATGGAGCATCCAAGAGACCAAAGAGTTCCTCGCGATCCGTGCTGAGCTGGATCAGACCTTCATGGAGACTAAGAGGAACAGACAGTTGTGGGAAGTCATCTCTACCCGAATGAAGGAAAAGGGTTACCATAGAAGCGCTGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGATTTGAGACAATGGAGCAAGAATCGTTGAGATATCAATTCCCATTTTACAATGAGTTTCAAGCGATTTTCGCATCAAGGATGCAGAGAATGCTGTGGGCTGAAGCTGAAGGTGGGTTGAAGAAGAACAAGGGGATACAACTCTCGTCTGAAGAAGAAGATAATGGTAATGAAGAGAGTGAGGCAGGTAGCAGCAGAAAGAAGAAAAAGGCAAAGCTAGTTGGTGGAGGAGGTGACAATGGTAATAGTAGGTTGAACAATTTCAAGGAGATTTTGGAGGAGTTCATGAGGCAGCAAATGCATATAGAAGCACAATGGATGGAAGCATTTGAGGCAAGGGAATCTGAGAGGAGGTTGAAGGAGATGGAGTGGAGACAAACCATGGAGGTGTTAGAGAATGAGAGAATAATGATGGAAGAGAGATGGAGAGAAAGGGAGGAAGAAAGGAGGATTAGAGAAGAAGCTAGGGCTGAGAAGAGGGATGCTCTAATCATGGCTTTGCTAAACAAGCTAGAAAGACAAGAGATGTAG 834 0.4484 MEGNHLHHHHHQHHLQQQQNHLQLQNITSVNVDIIDRFPQWSIQETKEFLAIRAELDQTFMETKRNRQLWEVISTRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQESLRYQFPFYNEFQAIFASRMQRMLWAEAEGGLKKNKGIQLSSEEEDNGNEESEAGSSRKKKKAKLVGGGGDNGNSRLNNFKEILEEFMRQQMHIEAQWMEAFEARESERRLKEMEWRQTMEVLENERIMMEERWREREEERRIREEARAEKRDALIMALLNKLERQEM* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0739 277 ProSiteProfiles Myb-like domain profile. 41 97 IPR001005 -
Apr10g0739 277 MobiDBLite consensus disorder prediction 1 20 - -
Apr10g0739 277 CDD GT1 39 102 - -
Apr10g0739 277 PANTHER - 1 276 - -
Apr10g0739 277 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 276 - -
Apr10g0739 277 MobiDBLite consensus disorder prediction 160 175 - -
Apr10g0739 277 Gene3D - 41 102 - -
Apr10g0739 277 Pfam Myb/SANT-like DNA-binding domain 40 124 IPR044822 -
Apr10g0739 277 Coils Coil 229 249 - -
Apr10g0739 277 MobiDBLite consensus disorder prediction 145 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0739 Apr-Chr10 18736615 18738507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0739 11 274 Trihelix Transcription Factor Family AT2G38250 51.825 1.46e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr10g0739 Myb_DNA-bind_4 9.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0739 - - gmx:100818384 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0739 10 18736615 18738507 Apr10g0739 10 18736615 18738507 ECH