Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0724 ATGGCAACCGCCACAGCAACCGCAGCCGCCACTTCCTCCTTCATCGGAACGCGTCTCCGCGACGTGCATTCCGGTTCGGGTCGGGTTCAAGCGAGGTTCGGATTCGGAGCGAAGAAAGCCACGAAAAAAGTTGCAAAGGGTTCGGGTCAGGGTACGGACCGGCCGTTGTGGTACCCAGGGGCGAAGGCACCGGAATGGCTCGACGGAAGCCTAGTCGGTGACTACGGGTTCGACCCGTTCGGGTTGGGGAAACCCGCGGAGTACTTGCAGTTCGAATTGGATTCCTTGGATCAGAACCTAGCGAAGAACGTGGCGGGTGATGTGATAGGAACGAGGACGGAGGGTGCGGATGTTAAATCGACGCCGTTTCAGCCTTACACAGAGGTTTTTGGGTTGCAGAGGTTCAGAGAATGCGAGCTTATTCATGGAAGGTGGGCCATGCTTGCCACGCTTGGGGCCCTCACTGTTGAGTGGCTCACCGGTGTTACGTGGCAAGACGCTGGCAAGGTGGAGCTAGTGGAAGGGTCATCATATCTTGGGCAACCACTTCCATTCTCAATTAGCACATTGATTTGGATTGAGGTTCTGTTAGTTGGATACATTGAGTTCCAGAGGAATGCTGAGCTTGACCCAGAAAAGAGGTTGTACCCAGGTGGCAAGTACTTTGACCCTCTTGGCTTAGCCGCAGATCCTGAGAAGAAAGCCACACTTCAATTGGCAGAAATCAAGCACGCACGTCTTGCCATGGTTGCAGCATTGGGCTTTGCAGTTCAAGCTGCTGCCACTGGCAAGGGCCCACTTAACAATTGGGCTACCCATTTGAGTGACCCACTTCACACAACCATCATTGACACCTTCTCATCCTCTTAA 870 0.5391 MATATATAAATSSFIGTRLRDVHSGSGRVQARFGFGAKKATKKVAKGSGQGTDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDVIGTRTEGADVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLLVGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAALGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0724 289 Pfam Chlorophyll A-B binding protein 63 259 IPR022796 -
Apr10g0724 289 SUPERFAMILY Chlorophyll a-b binding protein 52 287 - -
Apr10g0724 289 Gene3D Chlorophyll a/b binding protein domain 57 289 - -
Apr10g0724 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 289 IPR001344 GO:0009765|GO:0016020
Apr10g0724 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 4 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0724 Apr-Chr10 18208120 18210521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0724 15 289 Chloroplast and Mitochondria Gene Families AT3G08940 84.783 9.46e-174 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0724 K08915 - gmx:100785180 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0724 10 18208120 18210521 Apr10g0724 10 18208120 18210521 ECH