Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0720 ATGAAAGCCCTCACCAGTTATTGTTCTAAGACCACCGTTGAGAGTCTAGGATCTCTGTCTCCCAGAGTTTCTATTGGTGTTTCTGATAGACGCGAGTTCTGTTTTTCCCTGCACTCTAGAAATGAGATAAAAGGATGCAACTTTTGGGTCCTGAAATTGGTCCAAAACAAGGGTACTTACCCTCTTCATGCTGTGCCACCAAAAGACCAGGTGGAGTTGGAAACTGCAGAGCCTCAAGCTCAACAAAGTGAACATACAGATGAAACAAAGCTTTTTCGTGTAGCATTTCAGTTACAAAAGAATTGTAACTTCGGTGAACAGTTTCTAGTAGTTGGAGATGATCCTGTGCTTGGTTCATGGGATCCTTCAGATGCATTACCAATGACATGGTCCGATGGACATGTATGGACTGTTGAGTTGGATGTGCCTGCTGGAAAGTTAATCCAGTACAAGTTTATACTGAAAGGAAAAGGAGGTAATATTATTTGGCAACCAGGCACAGATCGAATTATCCACACTTGGGAAACTACGAACCGGATAACTGTCTGTGAAGATTGGGAGAATGCCGAACTTCAGAAGATTATAGAGGAACCTCAGGTTGATCAACTTCAGAAAATAATAGAGGAAGATCAACTTGCTAATTCAAATGAGGAACCTCAAGTTAACTCAGAAGTGTCAACTTTTACTGAAAATTTGGATGGTGCTCAAGAGAGTCTGCAAATCAATGCATCTGAAATATCAGGCATTGAAAATACCGGAACTCATGTAGAGGAGAAATCACTTACTGAACCAGTCCTGCAACAAATCACTGGTGATAGTATTTCTTCCTCATTGGAGAAGCCAATGGCTATTGTTGCAGAAAATATAGGTGCCTCAGAATATCTCATCGATGGTACAAGCCACAAAAAGAATATTATTCAACAGAATGAAAAATCTGCAGATAGTCTGGAAAATGATGATATAATATATGATTTTGGACACAACGGAAGTGCCACGTCAATCGGGAATCAGGAAAGGACAAATTTTGAGAGCAACTTATTTGATTTTGAAGGAGGTCCTGTTCTTGTTCCTGGCTTGATACAACCAACTGTGCCAAGTGATGAAGATGGCCAAGATGAAGTTCAAGAAATGACTACCATGGACACTTCAGTTGGAGCTTTTGAAACTCAGGATCAGAATATACCAGAGTTGAGTAAGGAGCAAGAATCCGATGATGACACAGCCCAAGAGATAAATGCAACCATGAATAATGAGCCAGAACTTCTTTACAATGAAAATGAAGAGCAGTCTCAAGAGATGGAAGATAGGTCAAACTACCAGCAAGTTGATGATAATAATCCCTTGCAAAATGACATCAAATGGGGCCAGGAAACGGTAAAGAAATTTCTAACAAAACTTGGATTCCTTTGA 1410 0.4014 MKALTSYCSKTTVESLGSLSPRVSIGVSDRREFCFSLHSRNEIKGCNFWVLKLVQNKGTYPLHAVPPKDQVELETAEPQAQQSEHTDETKLFRVAFQLQKNCNFGEQFLVVGDDPVLGSWDPSDALPMTWSDGHVWTVELDVPAGKLIQYKFILKGKGGNIIWQPGTDRIIHTWETTNRITVCEDWENAELQKIIEEPQVDQLQKIIEEDQLANSNEEPQVNSEVSTFTENLDGAQESLQINASEISGIENTGTHVEEKSLTEPVLQQITGDSISSSLEKPMAIVAENIGASEYLIDGTSHKKNIIQQNEKSADSLENDDIIYDFGHNGSATSIGNQERTNFESNLFDFEGGPVLVPGLIQPTVPSDEDGQDEVQEMTTMDTSVGAFETQDQNIPELSKEQESDDDTAQEINATMNNEPELLYNENEEQSQEMEDRSNYQQVDDNNPLQNDIKWGQETVKKFLTKLGFL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0720 469 SMART CBM_20_2 91 183 IPR002044 GO:2001070
Apr10g0720 469 Pfam Starch binding domain 92 178 IPR002044 GO:2001070
Apr10g0720 469 MobiDBLite consensus disorder prediction 386 451 - -
Apr10g0720 469 CDD CBM20 93 186 - -
Apr10g0720 469 MobiDBLite consensus disorder prediction 408 426 - -
Apr10g0720 469 Gene3D Immunoglobulins 89 187 IPR013783 -
Apr10g0720 469 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 86 188 IPR002044 GO:2001070
Apr10g0720 469 SUPERFAMILY Starch-binding domain-like 91 185 IPR013784 GO:0030246
Apr10g0720 469 PANTHER BLR6771 PROTEIN 1 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0720 Apr-Chr10 18121149 18124841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0720 - - aprc:113849429 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0720 10 18121149 18124841 Apr10g0720 10 18121149 18124841 ECH
Apr4g2011 4 28769417 28780101 Apr10g0720 10 18121149 18124841 PCT