Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0709 ATGCCTTCCTCTTCCACAACCATAGTCTCTAAATGCACAATCTACCCGGACCAAGAATCAAACATGAAACCTTTGAAGCTCTCTGTTTCTGACCTTCCAATGTTGTCATGCCACTACATCCAAAAGGGTGTGTTACTCACTGCCCCACCCCACTCCTTCGAAGACCTAATTGTATCTCTTAAACACTCTCTTTCTATCGCACTCTCTCACTTCCCCGCCCTCGCGGGCAGGCTGTCCACCGATTCTGCCGGTTACGCTTACATCGACTGCAACGACGCTGGCGTCGACTTCATCCACGCTAAGGCCAAGCACTTAACTCTGAACGCTGTCGTTTCACCGTCACTTGTTGACGTTCACCCTTGCTTTAAGGAGTTCTTCGCCTACGACATGACGATATCTTATTCCGGCCACCATAACCCCCTTGCCGCCGTCCAAGTCACCGAGCTCGCCGACGGTGTCTTCGTCGGCTGCACCGTCAACCACGCCGTCACCGACGGCACCTCCTTCTGGCACTTCTTCAACACCTTCGCCGCCGTCACCAAGGGCGCCGGTGCCAAGAAGGTGCTCTGCTCGCCGGACTTCACTCGCGACACCATCTTCAACTCTGCTGCCGTCCTCTCCGTTCCCTCCGGCGGCCCCACTGTCACCTTCGACGCCGACGAGCCTCTCCGGGAGCGAGTCTTCCACTTCTCCCGCGAAGCCATACAGAGGCTCAAACAAAGAGCCAACGGCAATATCAACGAATTAACGGAATCCGTGGAAGTCATGGGAAAACAGGTTAATGACGGTTGGAAAATCGCTAACGGTAACGGAAAGATAACGACAACGCGCTTGGCTAACGGAAACGGAAGGAACGAGATCTCATCGTTTCAGTCGTTGTCCGCTCAGCTTTGGCGTGCGGTGACGCGTGCGAGGAAATATTTGGATGTTTCCAAAACGTCGACGTTTCGTATGGCGGTTAATTGCCGCCACAGGTTGGAACCGAAGATGAATCCGTTTTACTTCGGCAATGCTATTCAGAGCATTCCAACGGTAGCAACCGTTGGAGACATAATCTCAAAAGATCTGCGTTTTTGCGCGGAATTGCTTCACCGAAACGTCGTCTCACACGACGACGCTACGGTGCGCCGCGGCATAGAGGATTGGGAGAACGCACCGAGGTTGTTCCCGCTTGGGAACTTTGACGGCGCAATGATCACTATGGGAAGTTCTCCGCGTTTTCCTATGTACAACAACGACTTCGGGTGGGGTAGGCCCTTGGCCATTCGGAGCGGAAAAGCGAACAAGTTTGACGGCAAGATCTCTGCGTTTCCGGGGAGAGAAGGAAACGGCAGCGTCGATCTTGAGGTCGTCTTGGCCCCTGAAACGATGGCGGGGCTTGAAAACGACGTGGAGTTTATGCAGTACGTAACGGAGGCCGTGTGA 1425 0.5396 MPSSSTTIVSKCTIYPDQESNMKPLKLSVSDLPMLSCHYIQKGVLLTAPPHSFEDLIVSLKHSLSIALSHFPALAGRLSTDSAGYAYIDCNDAGVDFIHAKAKHLTLNAVVSPSLVDVHPCFKEFFAYDMTISYSGHHNPLAAVQVTELADGVFVGCTVNHAVTDGTSFWHFFNTFAAVTKGAGAKKVLCSPDFTRDTIFNSAAVLSVPSGGPTVTFDADEPLRERVFHFSREAIQRLKQRANGNINELTESVEVMGKQVNDGWKIANGNGKITTTRLANGNGRNEISSFQSLSAQLWRAVTRARKYLDVSKTSTFRMAVNCRHRLEPKMNPFYFGNAIQSIPTVATVGDIISKDLRFCAELLHRNVVSHDDATVRRGIEDWENAPRLFPLGNFDGAMITMGSSPRFPMYNNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGLENDVEFMQYVTEAV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0709 474 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 471 - -
Apr10g0709 474 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 471 - -
Apr10g0709 474 Coils Coil 232 252 - -
Apr10g0709 474 Gene3D - 221 467 IPR023213 -
Apr10g0709 474 Pfam Transferase family 6 467 - -
Apr10g0709 474 Gene3D - 6 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0709 Apr-Chr10 17585886 17587981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0709 60 462 Monolignol Biosynthesis Gene Families AT5G48930 27.119 4.19e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0709 - - gmx:100780358 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0709 10 17585886 17587981 Apr10g0709 10 17585886 17587981 ECH