Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0706 ATGTATGAAGTGTTCCTGAGTTTTAGAGGAGAAGACACGCGTGCCTCGTTCATTTCACATCTCTATGCTTCCTTTCAAAACGCTGGAATTAATGTTTTCAAGGATGATGATTCGCTTCGAAAAGGGGATCAGATTTCAAGCTCACTTTTGCGAGCAATTGAACAATCTGAAATTTCTATTATTGTATTTTCGAAAAATTATGCAGACTCACGATGGTGTCTGCAAGAATTGGAGCAAATAATGGTGTGTCATAGAACCATTAGCCGGGTGGTTCTGCCAGTGTTTTATGATGTTGATCCCTCAGAAGTGCGTCACCAGACCGGTGAGTTTGGAAGTGCATTTCAAAATCTTTTGAATAGAATTTCAGTGGGAGAAGAGAAGGAGAAGAGTTGGAGGAGGGCGCTTCGTGAGGCTGGTAGCATTTCAGGATTTGTAGTCCTAAATTCCAGGAATGAGAGTGAAGATATCAAGAATATTGTTGAACATGTCGCTCATTTGGTAGATAAGACAGAATTATTTGTTGCTAATCATCCTGTGGGAATAGAATCTCGCTTGAAAGTTGTGATCGAACTATTAAACAACCAACAATCAAAAGATGTTTTATTTCTAGGAATTTGGGGAATGGGAGGGTTAGGTAAAACAACCATTGCTAAAGCCATTTATAACCAAATTGGGCGAAATTTTGAGGGTAAGAGCTTCCTCTTAAATATCAGGGAAATCTGGGAGCAGAATACTAATAGAGTTTCTTTACAACGCCAGATTCTTAGTGATATTTGCAAATCAACAGCATCGAAGTTACTTGACATTGAATCAGGAAAAAATATATTAAAGGAAAGACTTGCCCAAAAAAAGGTACTCCTTATACTTGATGATGTGAATAAATTGGATCAATTGAATGCTTTGTGCGGTAGCTGGGAATGGTTTGGCTCAGGAAGTAGAATAATCATCACAACAAGAGATGAACATCTACTTAAAGTTCATGGAGTTGATCATATACATAGAATGGAAGAAATGAATGAAACTGAATCCCTTGAGCATTTTAGTTGGCATGCTTTCAAGAAAGCAAGCCCTAAAAATGATTTTGTTGAACTTTCAAGGAATGTTGTCATTTATTCTGGAGGATTGCCCCTAGCACTTGAAGTTCTTGGGTCCTATTTGTTTGATAGGGGAATAACAGAATGGAAAAGTGTATTGGATAAATTGAAAAAAATTCCCAATAATGAAGTACAGAAGAAGTTGAGAATAAGTTTCGATTGTTTAAATGATGATAGAGAGAAAGAAATATTCCTTGACATAGCTTGCTTCTTTATTGGTATGAATCGAAATGATGTTATACAAATATTAAATGGTTGGGGATGCTTTCCAGAGATTGGAATTAGTGTTCTTGTAGAGCGAAGCCTGGTTACTATTGACAATAAGAACAAGCTTGGAATGCATGATTTGCTAAGAGACATGGGAAGAGAAATAATTCGTGAAAAATCACCTGATGATCCTGAGGAACGTAGCAGGTTATGGCTTAGTGAAGAAGTTATTGATGGAACAAAAGCTATTAAGGGACTGACTTTGAAGTTACCAGAAAAAAATACAATTTGCTTGAAGACCAAAGCATTCAAGAAGATAAATAGTCTTAGACTGCTTCAACTTTCCGGTGTGCAACTTGATGGGGATTTTAAATATCTTTCAGGAGATCTTAGATTGCTATGCTGGCATAACTTTCCTTTAAGTTGCATGCCTGCAGAATTTCGTCAAAGAAGTTTAGTTGCCATTGAATTGAAACATAGCAATCTTAAACAAATGTGGGAGAAGGCCCAGGTGCTAGTGAATCTAAAAATTCTCAATCTTAGTCATTCCCATGACTTGACCAAAACGCCAAACTTTTCGTACTTGCCTAATCTTGAAAAGCTATTACTTAAAGATTGTCCAAGTTTGTCTGCTATCTCCCATACTATTGGATATCTAAATAAGCTTCTTCTGTTAAATTTGAAAGCGTGTACGGGCCTTCAAAAGCTCCCCAGAAGTATCTATAAATTGAAATCTCTGGAAACTTTAATTCTTTCTGGATGTTCAAAGATTGACAAGTTAGAGGAAGACTTGGAACAGATGAAATCTTTGACAATTTTGATTGCAGATAATACTGCCATAATGAAAGTCCCCTTCTCAATAATAAGATCAAAAAGCATTGGATATATTTCTTTATGTGGCTTTGAAGGATTTTCACGTGATATATTTCCTTCTCTCATTTGGTCTTGGATGTCACCAACAAATATTTTGTCATCCCTAATTCAATCAAACACGAGTATGTCTTCTCGTGCTTTCCTAGATGGCCCAGATAGTAGCTTTTATAGTGTATCATCTATTTTGAAGGACATTCCAAAACTTCGAAGCCTTTATGTGGTGTGTGACTCAGAATTTCAACTAAATCAAGATGTTGGAAGAATTTTGGACATCTTAAAAGGCACAAATCATAAGAAATTGGAAGCAAGTGTATTTATGTCACAAATCTCTGATGTGAAAAGTTCTCCATTAGTTGATTGTCATGGTCAAATTCATGTTTTAGAGTCAAAGAATTTTCTAAAATCCCTTTTAATACAGATTGGAGCTAAAGGTCAGATGCTCAATATTCTCAAAGAAAGTATTTTACAGGCTACGCATGGGATTGGAGATTTTCTTTCCTTCCCTGGTGATAATTATTTTGATTGGTTAACCTTCCATTGTAAAGGTTCTTCGGTAATATTTGAAGTCCCACATATGAATGGACATAACCTGAGGAGCATGATGTTGTCCATTGTCTATTATTCTCCCGATGACATAATATCAGAGGGGTGTCAAAATGTGTTAATTAATAATTACACTAAGAGAACCATTCTGGTTTATAAAAGAGATACACTAACCTCCTTTGAAGATGAGGACTGGCAGAGCATAACATCAAATCTAGAACCTGGTAACAAGGTGGAGGTTATTGTTGTTTTTGGGCATGGATTCTTTGTGAAGAATACAACAATATATCTCTTATATGATAAACAAGTTGATGAAGCAATGGAACACTGCTATGCAGTAGATAGGGATGATATAGTTTCTGGTCATGAAACACTTGGTAGACTTTTCACACTTCCTTCCCTTGTCCGTGCCATTCTAATCTCACGACCAATCTGGATTGGTCTGGTTGTCATTCTAATTTGGCTCTCTTGCCGCCATTCAAACAAGCGAAGAAGTGGTAGTCTCATTACAAGATATATACTAAAGGGAAAGTGGCTAGTGGATTACATACAAAAATTTCTTGCTTTCAAGAAGGCCAAGGAAGCCCGCAGTGTCATTACTAATGCTAGCAGTGGCAGAGTTTGGCTGAGGAGTTAA 3354 0.3667 MYEVFLSFRGEDTRASFISHLYASFQNAGINVFKDDDSLRKGDQISSSLLRAIEQSEISIIVFSKNYADSRWCLQELEQIMVCHRTISRVVLPVFYDVDPSEVRHQTGEFGSAFQNLLNRISVGEEKEKSWRRALREAGSISGFVVLNSRNESEDIKNIVEHVAHLVDKTELFVANHPVGIESRLKVVIELLNNQQSKDVLFLGIWGMGGLGKTTIAKAIYNQIGRNFEGKSFLLNIREIWEQNTNRVSLQRQILSDICKSTASKLLDIESGKNILKERLAQKKVLLILDDVNKLDQLNALCGSWEWFGSGSRIIITTRDEHLLKVHGVDHIHRMEEMNETESLEHFSWHAFKKASPKNDFVELSRNVVIYSGGLPLALEVLGSYLFDRGITEWKSVLDKLKKIPNNEVQKKLRISFDCLNDDREKEIFLDIACFFIGMNRNDVIQILNGWGCFPEIGISVLVERSLVTIDNKNKLGMHDLLRDMGREIIREKSPDDPEERSRLWLSEEVIDGTKAIKGLTLKLPEKNTICLKTKAFKKINSLRLLQLSGVQLDGDFKYLSGDLRLLCWHNFPLSCMPAEFRQRSLVAIELKHSNLKQMWEKAQVLVNLKILNLSHSHDLTKTPNFSYLPNLEKLLLKDCPSLSAISHTIGYLNKLLLLNLKACTGLQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMKSLTILIADNTAIMKVPFSIIRSKSIGYISLCGFEGFSRDIFPSLIWSWMSPTNILSSLIQSNTSMSSRAFLDGPDSSFYSVSSILKDIPKLRSLYVVCDSEFQLNQDVGRILDILKGTNHKKLEASVFMSQISDVKSSPLVDCHGQIHVLESKNFLKSLLIQIGAKGQMLNILKESILQATHGIGDFLSFPGDNYFDWLTFHCKGSSVIFEVPHMNGHNLRSMMLSIVYYSPDDIISEGCQNVLINNYTKRTILVYKRDTLTSFEDEDWQSITSNLEPGNKVEVIVVFGHGFFVKNTTIYLLYDKQVDEAMEHCYAVDRDDIVSGHETLGRLFTLPSLVRAILISRPIWIGLVVILIWLSCRHSNKRRSGSLITRYILKGKWLVDYIQKFLAFKKAKEARSVITNASSGRVWLRS* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0706 1117 Gene3D Ribonuclease Inhibitor 506 809 IPR032675 -
Apr10g0706 1117 Gene3D - 337 421 IPR042197 -
Apr10g0706 1117 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 11 1004 - -
Apr10g0706 1117 Pfam NB-ARC domain 184 409 IPR002182 GO:0043531
Apr10g0706 1117 Gene3D - 1 171 IPR035897 -
Apr10g0706 1117 SMART till_3 1 141 IPR000157 GO:0007165
Apr10g0706 1117 PRINTS Disease resistance protein signature 202 217 - -
Apr10g0706 1117 PRINTS Disease resistance protein signature 279 293 - -
Apr10g0706 1117 PRINTS Disease resistance protein signature 372 386 - -
Apr10g0706 1117 PRINTS Disease resistance protein signature 675 691 - -
Apr10g0706 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 432 IPR027417 -
Apr10g0706 1117 SMART AAA_5 199 339 IPR003593 -
Apr10g0706 1117 SUPERFAMILY "Winged helix" DNA-binding domain 408 511 IPR036390 -
Apr10g0706 1117 SUPERFAMILY L domain-like 522 800 - -
Apr10g0706 1117 Gene3D - 172 332 IPR027417 -
Apr10g0706 1117 Pfam TIR domain 2 163 IPR000157 GO:0007165
Apr10g0706 1117 ProSiteProfiles TIR domain profile. 1 167 IPR000157 GO:0007165
Apr10g0706 1117 CDD AAA 179 325 - -
Apr10g0706 1117 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1004 IPR044974 GO:0006952
Apr10g0706 1117 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 144 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0706 Apr-Chr10 17447470 17467216 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0706 2 721 WRKY Transcription Factor Family AT4G12020 31.782 4.23e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0706 - - aprc:113850911 1894.78