Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0697 ATGATAGTTGCTATGGACTTGAATGCCTCACCGGTTCCGGAGGAAGAGGAAGATACTTTTGAGGAAAGGATACATGTTGAAGAGTATACTGCACCTGAAGAACGCATAGAATCTGGAGCTGATATTGCACGCCGGGAGCGTGAAGAAAGAAAGAGAAGGTTGAAGAGAGAACGATCAGATGACAGACCTGTACATGTGTCGCAGTCACCTGGATATGATAATCTATTTAATACTAAGAACCTTAAATCATATGATAAAAGCAGGCTTCCTCCGGGGTGGTTGGATTGCCCTTCATCTGGCCAGGAAATCTGTTGCATGATACCTTCGAAGGTTCCACTTGGTGAATCATTCAATGACTGCATCGCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTATTGGAAGAAAGCTTGGTCTGGTGATCGATTTGACAAATACCTCTCGATACTATCCAGTGTCAGATTTAAAGAAAGAGGGCATCAAGCATGTTAAGATTCAATGCAGAGGGCGTGATTCTGTACCTGATAATTTATCTGTGAACCAGTTCGTCTATGAGGTTACACAATTTTTGTCGCGTCAAAAACACTCCAAGAAGTATATACTTGTTCATTGTACACATGGGCATAATCGTACAGGATACATGATCATCCACTATCTAATGCGTGCCATGTCAATGTCAGTCACTCAGGCAATAAAAATATTTTCTGAAGCACGCCCTCCAGGAATCTACAAACCTGATTACATTGATGCATTATACGCATTTTATCATGAGAAAAAGCCTGAAATGGTAGTTTGTCCTCCTACTCCAGAGTGGAAGAGATCTTCTGAATTTGACCTCAATGGTGAAGCTCTTCCAGATGATGATGATGATGGAGTACCAGGCCCTGATTTGCCGGATAACCATGAGACAGACACAAGAATGACAAACGATGATGTTTTGGGAGATGAGATACCTACTGATCAACAAGATGCATTGCGACAGTTCTGTTATCAAACGCTTAAATTGGGTGTTGGGCCCAGGGGACACACACAATTTCCAGGTTCACACCCAGTTTCTCTCAACAGGGATAATTTGCAATTGTTACGACAACGATATTATTATGCAACATGGAAAGCAGATGGTACTCGATATATGATGCTAATAACAATGGATGGGTGTTACTTGATTGATAGAAGTTTTAATTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGAGTACTAATGATGGTTTGGGTGAGAAGACCCACCACTACACATTACTTGATGGTGAGATGGTTATCGATACATTGCCAGATTCACAGAAGCAGGAGAGAAGATACCTTATATATGATCTGATGGCAATCAACCAAGTATCAGTAATAGAGCGACCCTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCAGGAACGACACAATATATACCAGAGCAGAAATCCTTACTATAGATATGACTTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAAGGAGTTCATTAAAAGACTCTCACATGAGGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATATTCCACGTACTCATGAAGGACTCTTAAAGTGGAAATATGCTGATCTGAATTCTGTTGATTTTCTCTTTGAGGTAGTTGATGGTGATCGTGAGCTACTTTTTCTCTATGAACGGGGAAAGAAGAAACTCATGGACGGGAACAGGGTTGAATTCAGAGATGGATCAGATGCTTCACTCTATTCCGGAAAAATCATAGAGTGTTCTTGGGATTTTGATAGACAGGAATGGAAGTTTATGCGAGTCAGAACAGATAAATCTACACCGAATGAATTTAATACTTACAAGAAGGTGATGCGGAGCATAAGAGACAACATCACTGAGGATGACTTGTTGAATGAAATAAGTGAGATAATTCGCCTTCCCATGTATGCTGACAGGATAAGAATGGATAGCAAAGCGAATCAACATGCTAGCGTTGCAAGGCGAAGGTGA 2055 0.4092 MIVAMDLNASPVPEEEEDTFEERIHVEEYTAPEERIESGADIARREREERKRRLKRERSDDRPVHVSQSPGYDNLFNTKNLKSYDKSRLPPGWLDCPSSGQEICCMIPSKVPLGESFNDCIAPGKRYSFKQVIHQQRVIGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCRGRDSVPDNLSVNQFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAMSMSVTQAIKIFSEARPPGIYKPDYIDALYAFYHEKKPEMVVCPPTPEWKRSSEFDLNGEALPDDDDDGVPGPDLPDNHETDTRMTNDDVLGDEIPTDQQDALRQFCYQTLKLGVGPRGHTQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRSTNDGLGEKTHHYTLLDGEMVIDTLPDSQKQERRYLIYDLMAINQVSVIERPFYERWKMLEKEVIEPRNQERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDDPYIPRTHEGLLKWKYADLNSVDFLFEVVDGDRELLFLYERGKKKLMDGNRVEFRDGSDASLYSGKIIECSWDFDRQEWKFMRVRTDKSTPNEFNTYKKVMRSIRDNITEDDLLNEISEIIRLPMYADRIRMDSKANQHASVARRR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0697 684 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 684 - -
Apr10g0697 684 ProSiteProfiles ATP-dependent DNA ligase family profile. 437 582 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Apr10g0697 684 PIRSF mRNA_capping_HCE 75 684 IPR017074 GO:0004484|GO:0006370|GO:0140818
Apr10g0697 684 Pfam mRNA capping enzyme, C-terminal domain 558 652 IPR013846 -
Apr10g0697 684 Pfam Dual specificity phosphatase, catalytic domain 137 261 IPR000340 GO:0008138|GO:0016311
Apr10g0697 684 ProSiteProfiles Dual specificity protein phosphatase domain profile. 116 267 IPR020422 GO:0006470|GO:0008138
Apr10g0697 684 Coils Coil 40 60 - -
Apr10g0697 684 CDD RNA_5'-triphosphatase 92 258 - -
Apr10g0697 684 Pfam mRNA capping enzyme, catalytic domain 355 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
Apr10g0697 684 SMART dsp_5 123 263 IPR020422 GO:0006470|GO:0008138
Apr10g0697 684 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 554 - -
Apr10g0697 684 CDD Adenylation_mRNA_capping 326 554 IPR001339 GO:0004484|GO:0005524|GO:0006370
Apr10g0697 684 PANTHER MRNA-CAPPING ENZYME 3 684 - -
Apr10g0697 684 ProSitePatterns Tyrosine specific protein phosphatases active site. 208 218 IPR016130 GO:0016311|GO:0016791
Apr10g0697 684 MobiDBLite consensus disorder prediction 1 74 - -
Apr10g0697 684 Gene3D DNA ligase/mRNA capping enzyme 314 553 - -
Apr10g0697 684 MobiDBLite consensus disorder prediction 300 317 - -
Apr10g0697 684 Gene3D Protein tyrosine phosphatase superfamily 65 284 IPR029021 -
Apr10g0697 684 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 278 IPR029021 -
Apr10g0697 684 SUPERFAMILY Nucleic acid-binding proteins 556 669 IPR012340 -
Apr10g0697 684 Gene3D - 586 661 IPR012340 -
Apr10g0697 684 MobiDBLite consensus disorder prediction 23 64 - -
Apr10g0697 684 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 186 255 IPR000387 GO:0016311|GO:0016791
Apr10g0697 684 MobiDBLite consensus disorder prediction 284 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0697 Apr-Chr10 17162161 17178681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0697 1 684 Protein tyrosine phosphatase (PTP) family AT3G09100 68.841 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0697 K13917 - gmx:100776633 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0697 10 17162161 17178681 Apr10g0697 10 17162161 17178681 ECH