Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0671 ATGGGGGCTCGTTGCTCTAAATTCTCCTTCTGCTGGTTCCACTCACACCTCAAACCTTCTGTCCTTGAATCCTCTGACCAAGAAAATGGTGACACGGGTGAAAGAAAATTGTGGCCTAGTTTTGGTGAGTTCAGTTTAGAGCAACTGAAGGCTGCCACAAATGGGTTCTCATCAGAAAACATTGTATCTGAGCATGGTGAGAAAGCTCCCAATGTTGTTTACAAAGGGAAACTTGACAATGGACAATGGATTGCCATCAAACGTTTCAACAAGCTTGCTTGGCCTGATTCTCGCCAATTCCTTGAGGAAGCAAGACAAGTTGGGAGCCTTAGAAGTGAACGTTTGGCAAATTTGATTGGTTATTGCTATGAAGGAGAAGAGAGGCTGCTAGTGGCTGAATTTATGCCACATGAAACTCTGGCTAAGCATCTCTTTCATTGGGAGGCACAGCCCATGAAATGGGCAATGAGGTTAAGGGTGGCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACCAGTAAAGGAAGGGGCTTGTATCATGATCTCAATGCTTACAGGATCTTGTTTGATCAGGATGCTAATCCTAGGTTGTCTTGCTTTGGACTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCTTTCACCCCTCCTGAATACTTGAGAACTGGTAGAGTGACTCCAGAGAGTGTGGTTTACAGTTTTGGAACACTGTTGCTAGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGATCTGATTCGTGGAAAAAACTTTTTGATGTTGATGGATTCAGCCTTAGAGGGTCACTTTTCAAAGGATGATGGAACTGAGCTGGTTCGTTTGGCTTCCCGATGTTTACAATATGAAGCTCGTGAGAGGCCAAATGCAAAGTCCCTTGTTGCATCTCTCATGTCACTTCAGAAAGAAATAGAGGTCCCCTCCTATGTTCTAATGGGTCTCAAGCATGAAACTGCATCCTCAACAAAGCAATTGTCATTGACACCTTTGGGTGAAGCTTGTTTGAGACTAGATCTTACTGCAATACATGAAATATTAGAGAAGACTGGTTACAAGGATGATGAAGGAATTGCTAATGAGCTTTCCTTTCAATTGTGGACCAGCCAAATGCAAGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCTTTTAGAGCTAAGGACTTTGTCACTGCCATCGACTGCTACACGCAATTCATAGATGGAGGGACCATGGTGTCACCTACAGTGTATATAAGGCGTTGCTTATCCTATTTGATGAATGAGATGGCACAAGAAGCTCTTGGCGATGCTATGCAAGCCCAAGTGGTATCTCCTGAGTGGCCCACTGCTTTGTATCTACAAGCAGCTTGTCTTTTCAGCCTTGGAATGGAAAATGATGCACAAGAGACTCTCAAAGATGGGACTAAAATGGAAGCCAAAAGAACCAAAAATTGA 1476 0.4343 MGARCSKFSFCWFHSHLKPSVLESSDQENGDTGERKLWPSFGEFSLEQLKAATNGFSSENIVSEHGEKAPNVVYKGKLDNGQWIAIKRFNKLAWPDSRQFLEEARQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVASLMSLQKEIEVPSYVLMGLKHETASSTKQLSLTPLGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTQFIDGGTMVSPTVYIRRCLSYLMNEMAQEALGDAMQAQVVSPEWPTALYLQAACLFSLGMENDAQETLKDGTKMEAKRTKN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0671 491 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0671 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
Apr10g0671 491 SUPERFAMILY Protein kinase-like (PK-like) 38 320 IPR011009 -
Apr10g0671 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Apr10g0671 491 SUPERFAMILY TPR-like 387 484 IPR011990 GO:0005515
Apr10g0671 491 Gene3D Phosphorylase Kinase; domain 1 32 134 - -
Apr10g0671 491 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Apr10g0671 491 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 490 - -
Apr10g0671 491 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0671 Apr-Chr10 16564209 16568569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0671 19 322 Glycoside Hydrolase AT3G07070 32.738 1.15e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Apr10g0671 PK_Tyr_Ser-Thr 3.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0671 - - gmx:100814477 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0671 10 16564209 16568569 Apr10g0671 10 16564209 16568569 ECH