Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g0658 | ATGGCTATGGCTGCCAATGAAGATGGTGATCAGGAATATGCACCAAAGAAGAAGCCACCTTCTGAGGATGAGAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCATTGGTGAGGCCTGGTGGGGGTGATTCTAGACCTTCAGATGGTGACCAGGTTATCTATCACAGCACAATTAGAACTTTGGATGGAGTGCTTGTGGAATCTACCAGGTCTGACTATGGAGGCAAGGGCACCCCAATAAGACATGTTTTGGGCAAAAGCAAGATGTTATTGGGTTTGCTAGAAGGAATTCCAACAATGTTGAAGGGTGAAGTGGCCATGTTCAAGATGAAGCCACAGTTGCATTATGGTGAAGATGATTGTCCTATTTCTGCTCCTAATGGTTTTCCGAAAGATGATGAACTTCATTTTGAAATTGAGCTGATAGAATTTTTCAAAGCCAAGGTTGTTAGTGACGATTTGGGAGTTGTGAAAAAGGTAGTACATGAAGGGAAGGGTTGGGAATCTCCAAGAGAACCTTATGAAGTTCAGGCTTGGATTTCAGCAAAGACAGTTGCTGGGAAATTGATCATGTCACATACAGAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGCCTTGAAATGGCAATAGGAACAATGGTTCGGGAAGAGAAGGCTGTTATATATGTTACCAGTCAGTATTTAACTGAGTCTCCTCTGATGCCTGTAATAGAAGATTATGATGAAGTTCACTTTGAAGTGGAGCTCGTTCACTTTATTCAGGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAACGCCGGATTCGTGATGGGAAAGGTGATTTTCCAATGGACTGTCCCCTTCATGATAGTCTACTCCGTGTTCATTACAAGGGCACCGTTCTCAATGAAGAAAAGAGGGTATTCTGTGATACAAGAGTAGACAATGATGGTCAGCCATTGGAGTTCTGTTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAAATGTCTGTTCGCCTGATGCTTCCAGGAGAGATAGCTCTTATCACATGCCCCCCCGACTATGCTTATGATAAGTTTCCAAGGCCTTCAAATGTCCCTGAGGGTGCTCATATACAGTGGGAAATTGAGCTTATAGGTTTTGAAATGCCAAAGGACTGGACTGGATTGGACTTCAAAAGTATAATGAATGATGCTGAAAATATTAAAAACACGGGTAACAGGCTATTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGATGACGAGGAAGGAAAAGTTTTTGTAGATACACGTAATTTGCTACACCTGAACGTTGCTGCATGCTATCTGAAGTTGGGAGAGTGCAAAAAATCTATTGAGACTTGCAATAAGGTTTTGGAAGCAAATCCTGCACATGTCAAGGGTCTTTATCGACGCGGAATGGCCTACATGGCTGCTGGAGATTTTGAAGAAGCTAGGGCTGATTTTAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAAATGCAGCTCTTCAAAAACTGAGGCAGAAGGAGCAGGAAGTTGAGAAGAAAGCTAGGAGGCAATTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTGCGGAAGTTAAACCTGATGTAGATGGAGATCAGATGACAAGTGAAAGCCAGAAGGATGAAGTACATGGGGACTCAGATGGAACAAATTCAGAGGATTCACATGATGAAGCTCCAACTGATGCACCTAGAACGAGTTGGTTCTCTCTCTTTTGGCCTCCTGGAAGAAGACTTTTCTCAGCTCTTGGTCTTAATAGATGTACCATCCTATAA | 1875 | 0.4229 | MAMAANEDGDQEYAPKKKPPSEDEKRKKKIVPGSLMKALVRPGGGDSRPSDGDQVIYHSTIRTLDGVLVESTRSDYGGKGTPIRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYGEDDCPISAPNGFPKDDELHFEIELIEFFKAKVVSDDLGVVKKVVHEGKGWESPREPYEVQAWISAKTVAGKLIMSHTEGEPYFFTFGKSEVPKGLEMAIGTMVREEKAVIYVTSQYLTESPLMPVIEDYDEVHFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGTVLNEEKRVFCDTRVDNDGQPLEFCSGEGLVPEGFEMSVRLMLPGEIALITCPPDYAYDKFPRPSNVPEGAHIQWEIELIGFEMPKDWTGLDFKSIMNDAENIKNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFVDTRNLLHLNVAACYLKLGECKKSIETCNKVLEANPAHVKGLYRRGMAYMAAGDFEEARADFKMMMKVDKSTESDANAALQKLRQKEQEVEKKARRQFKGLFDKKPGEIAEVKPDVDGDQMTSESQKDEVHGDSDGTNSEDSHDEAPTDAPRTSWFSLFWPPGRRLFSALGLNRCTIL* | 625 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g0658 | 624 | SUPERFAMILY | FKBP-like | 267 | 389 | - | - | |
Apr10g0658 | 624 | SUPERFAMILY | TPR-like | 399 | 541 | IPR011990 | GO:0005515 | |
Apr10g0658 | 624 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 47 | 145 | IPR001179 | GO:0003755 | |
Apr10g0658 | 624 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 175 | 259 | IPR001179 | GO:0003755 | |
Apr10g0658 | 624 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 294 | 382 | IPR001179 | GO:0003755 | |
Apr10g0658 | 624 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 69 | 571 | - | - | |
Apr10g0658 | 624 | Gene3D | Tetratricopeptide repeat domain | 389 | 545 | IPR011990 | GO:0005515 | |
Apr10g0658 | 624 | Coils | Coil | 519 | 543 | - | - | |
Apr10g0658 | 624 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 | 69 | 571 | IPR031135 | GO:0030154|GO:0042761|GO:0099402 | |
Apr10g0658 | 624 | SUPERFAMILY | FKBP-like | 153 | 261 | - | - | |
Apr10g0658 | 624 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 52 | 148 | IPR001179 | GO:0003755 | |
Apr10g0658 | 624 | MobiDBLite | consensus disorder prediction | 10 | 31 | - | - | |
Apr10g0658 | 624 | SUPERFAMILY | FKBP-like | 26 | 151 | - | - | |
Apr10g0658 | 624 | Pfam | Tetratricopeptide repeat | 486 | 509 | IPR019734 | GO:0005515 | |
Apr10g0658 | 624 | SMART | tpr_5 | 451 | 484 | IPR019734 | GO:0005515 | |
Apr10g0658 | 624 | SMART | tpr_5 | 402 | 435 | IPR019734 | GO:0005515 | |
Apr10g0658 | 624 | SMART | tpr_5 | 485 | 518 | IPR019734 | GO:0005515 | |
Apr10g0658 | 624 | MobiDBLite | consensus disorder prediction | 555 | 594 | - | - | |
Apr10g0658 | 624 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Apr10g0658 | 624 | ProSiteProfiles | TPR repeat profile. | 485 | 518 | IPR019734 | GO:0005515 | |
Apr10g0658 | 624 | Gene3D | - | 151 | 263 | IPR046357 | GO:0003755 | |
Apr10g0658 | 624 | MobiDBLite | consensus disorder prediction | 555 | 601 | - | - | |
Apr10g0658 | 624 | Gene3D | - | 2 | 150 | IPR046357 | GO:0003755 | |
Apr10g0658 | 624 | Gene3D | - | 264 | 387 | IPR046357 | GO:0003755 | |
Apr10g0658 | 624 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 293 | 385 | IPR001179 | GO:0003755 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g0658 | Apr-Chr10 | 16160410 | 16175844 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g0658 | 35 | 550 | Calmodulin-binding Proteins | AT5G48570 | 30.798 | 1.17e-64 | 221 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr10g0658 | 10 | 16160410 | 16175844 | Apr10g0658 | 10 | 16160410 | 16175844 | ECH |