Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0658 ATGGCTATGGCTGCCAATGAAGATGGTGATCAGGAATATGCACCAAAGAAGAAGCCACCTTCTGAGGATGAGAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCATTGGTGAGGCCTGGTGGGGGTGATTCTAGACCTTCAGATGGTGACCAGGTTATCTATCACAGCACAATTAGAACTTTGGATGGAGTGCTTGTGGAATCTACCAGGTCTGACTATGGAGGCAAGGGCACCCCAATAAGACATGTTTTGGGCAAAAGCAAGATGTTATTGGGTTTGCTAGAAGGAATTCCAACAATGTTGAAGGGTGAAGTGGCCATGTTCAAGATGAAGCCACAGTTGCATTATGGTGAAGATGATTGTCCTATTTCTGCTCCTAATGGTTTTCCGAAAGATGATGAACTTCATTTTGAAATTGAGCTGATAGAATTTTTCAAAGCCAAGGTTGTTAGTGACGATTTGGGAGTTGTGAAAAAGGTAGTACATGAAGGGAAGGGTTGGGAATCTCCAAGAGAACCTTATGAAGTTCAGGCTTGGATTTCAGCAAAGACAGTTGCTGGGAAATTGATCATGTCACATACAGAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGCCTTGAAATGGCAATAGGAACAATGGTTCGGGAAGAGAAGGCTGTTATATATGTTACCAGTCAGTATTTAACTGAGTCTCCTCTGATGCCTGTAATAGAAGATTATGATGAAGTTCACTTTGAAGTGGAGCTCGTTCACTTTATTCAGGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAACGCCGGATTCGTGATGGGAAAGGTGATTTTCCAATGGACTGTCCCCTTCATGATAGTCTACTCCGTGTTCATTACAAGGGCACCGTTCTCAATGAAGAAAAGAGGGTATTCTGTGATACAAGAGTAGACAATGATGGTCAGCCATTGGAGTTCTGTTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAAATGTCTGTTCGCCTGATGCTTCCAGGAGAGATAGCTCTTATCACATGCCCCCCCGACTATGCTTATGATAAGTTTCCAAGGCCTTCAAATGTCCCTGAGGGTGCTCATATACAGTGGGAAATTGAGCTTATAGGTTTTGAAATGCCAAAGGACTGGACTGGATTGGACTTCAAAAGTATAATGAATGATGCTGAAAATATTAAAAACACGGGTAACAGGCTATTCAAAGAAGGAAAATATGAACTTGCCAAGGCAAAGTATGAAAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGATGACGAGGAAGGAAAAGTTTTTGTAGATACACGTAATTTGCTACACCTGAACGTTGCTGCATGCTATCTGAAGTTGGGAGAGTGCAAAAAATCTATTGAGACTTGCAATAAGGTTTTGGAAGCAAATCCTGCACATGTCAAGGGTCTTTATCGACGCGGAATGGCCTACATGGCTGCTGGAGATTTTGAAGAAGCTAGGGCTGATTTTAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAAATGCAGCTCTTCAAAAACTGAGGCAGAAGGAGCAGGAAGTTGAGAAGAAAGCTAGGAGGCAATTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTGCGGAAGTTAAACCTGATGTAGATGGAGATCAGATGACAAGTGAAAGCCAGAAGGATGAAGTACATGGGGACTCAGATGGAACAAATTCAGAGGATTCACATGATGAAGCTCCAACTGATGCACCTAGAACGAGTTGGTTCTCTCTCTTTTGGCCTCCTGGAAGAAGACTTTTCTCAGCTCTTGGTCTTAATAGATGTACCATCCTATAA 1875 0.4229 MAMAANEDGDQEYAPKKKPPSEDEKRKKKIVPGSLMKALVRPGGGDSRPSDGDQVIYHSTIRTLDGVLVESTRSDYGGKGTPIRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKPQLHYGEDDCPISAPNGFPKDDELHFEIELIEFFKAKVVSDDLGVVKKVVHEGKGWESPREPYEVQAWISAKTVAGKLIMSHTEGEPYFFTFGKSEVPKGLEMAIGTMVREEKAVIYVTSQYLTESPLMPVIEDYDEVHFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGTVLNEEKRVFCDTRVDNDGQPLEFCSGEGLVPEGFEMSVRLMLPGEIALITCPPDYAYDKFPRPSNVPEGAHIQWEIELIGFEMPKDWTGLDFKSIMNDAENIKNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKVFVDTRNLLHLNVAACYLKLGECKKSIETCNKVLEANPAHVKGLYRRGMAYMAAGDFEEARADFKMMMKVDKSTESDANAALQKLRQKEQEVEKKARRQFKGLFDKKPGEIAEVKPDVDGDQMTSESQKDEVHGDSDGTNSEDSHDEAPTDAPRTSWFSLFWPPGRRLFSALGLNRCTIL* 625
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0658 624 SUPERFAMILY FKBP-like 267 389 - -
Apr10g0658 624 SUPERFAMILY TPR-like 399 541 IPR011990 GO:0005515
Apr10g0658 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 145 IPR001179 GO:0003755
Apr10g0658 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 175 259 IPR001179 GO:0003755
Apr10g0658 624 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 294 382 IPR001179 GO:0003755
Apr10g0658 624 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 69 571 - -
Apr10g0658 624 Gene3D Tetratricopeptide repeat domain 389 545 IPR011990 GO:0005515
Apr10g0658 624 Coils Coil 519 543 - -
Apr10g0658 624 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 69 571 IPR031135 GO:0030154|GO:0042761|GO:0099402
Apr10g0658 624 SUPERFAMILY FKBP-like 153 261 - -
Apr10g0658 624 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 148 IPR001179 GO:0003755
Apr10g0658 624 MobiDBLite consensus disorder prediction 10 31 - -
Apr10g0658 624 SUPERFAMILY FKBP-like 26 151 - -
Apr10g0658 624 Pfam Tetratricopeptide repeat 486 509 IPR019734 GO:0005515
Apr10g0658 624 SMART tpr_5 451 484 IPR019734 GO:0005515
Apr10g0658 624 SMART tpr_5 402 435 IPR019734 GO:0005515
Apr10g0658 624 SMART tpr_5 485 518 IPR019734 GO:0005515
Apr10g0658 624 MobiDBLite consensus disorder prediction 555 594 - -
Apr10g0658 624 MobiDBLite consensus disorder prediction 1 54 - -
Apr10g0658 624 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Apr10g0658 624 Gene3D - 151 263 IPR046357 GO:0003755
Apr10g0658 624 MobiDBLite consensus disorder prediction 555 601 - -
Apr10g0658 624 Gene3D - 2 150 IPR046357 GO:0003755
Apr10g0658 624 Gene3D - 264 387 IPR046357 GO:0003755
Apr10g0658 624 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 293 385 IPR001179 GO:0003755
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr10g0658 Apr-Chr10 16160410 16175844 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0658 35 550 Calmodulin-binding Proteins AT5G48570 30.798 1.17e-64 221
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0658 10 16160410 16175844 Apr10g0658 10 16160410 16175844 ECH