Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0644 ATGGCTCTGACCCATCCAAAATCTCAATCCCTCAACCAAACCCTCTCCGTCCTCGAATGTGCCCTCATTAGAGTTGCTAGCAGCAGAATCACTGGCACATTCATCTATGTCTTTCTCCACTCCCTTGACACCATCGAAATCAAGATGCAAACTGAAGGTGTCTTATATATTTACAAAAGTAATCGTGACTCAAATTTGCGTCCTGCTGCTGATTTGATGATAGGGAGAATACCTGCAAAAGGCACTCCGATGATAAAGTTAGGATTCGGTTCTGAGGGTACCGGCCTAGTATGCCGAGTAGGTATTCGGTTTCTTTTTGCTGATGGTGGAACCGAGTTGATTCCTTTCCCAGTACAGATAGTATGGAATAATCAGCAGTTCCAAGGAACTATACAGGGGGCAAGAGAAGAATGTTCTGGAATCCATTATGAGCAAGAGCAGCTGGCATCTGATATTGCAAATATGCTGGAAAACTGGCTATTTATTGATGCTGCTTCAAAGGAGGAATATATGAACCTGGACACATTGATAAAAAGATTGGAAACTCAACTCAATAAGTTGCATGCAACTAAATACAGTCACAAGAATTTAAACGGTGTTTCACAGGCTAATGTTATCAAATATCTGCATTCAACAGTTTGTTGCAAAGGGACATGCACTTGTGAACAGTATAGCAAGCTGCTATTACATTTTGATGGTTGTCGATGTGATGATTGTCAAATATGTTATTCCTTGAAATTGCGTGGCACTGATATTCTTGAGCATCAATTTGAATTTCCAAATAGCGTAATTACGGGTTCTGTTGTGGGAGAAAATGATGCCCCTTCTGTTAGTTCTGAAGCCATGCTACCACCTAAAAAAAGAAGAAAAATGGAAGGTGCTTTAGGTGTCTCTTTAATTAATAATGCAAGTTCTGATCAATTGACTCCAAAAATGGTTCAACCTTGTTCTTCTGAAGCACTTTCAGAATTTCAGCAGCACCCAGAACCTCCTCTCTCTTCTATCTATTCTGAAGTTACAGAGAGTAATGTGAAAGAATTTACAATTTCAAATCCAATGCTTGATTCGATAAGCAATGTTGAGACAAAGAACAATGTTATTGATGATACAGTTGGGCAGACTTTCAAGATTGAAACAGTTATCTCTAAAGGCTTAGAACCTGATCATGTATCAGAGGAACCGGACTTCAAAAGCCATGATGTGAAAGCCAACAGCAACTTGAAAGAAACTGTTGTTGGATCCAATGCCAATATGCATAGTCTCTGCAAAGACCCTAGGCCTGCAGATATAGAGCACATACAAGGCAGGACCAGGTTCAACAAGGTAAATGGTACAAAGAGAGTCATTGAGCCAAAAGCTGATCAAGACAAGGAAACAAGGTCCTCAAATCCAACAGTTAATACTGTTTCCTTAACAGATTTTTTCACGAGTAATCAATTAATGGAACACATTATGAGTCTAAGAAGGCAGTTTGTTCAGAATCCCACTGATGAAGAACCAGAAAATGCTGATTACATATGCCAATTATGTGAAATGGGACAGCTTTATTTTGCCCAAATTCCAATTTATTGCTATTGTTGTAGCAGCCGCATCAAGGAAAATGCAAACTATTACCAAAGCAGAGGAGTAGAATCTGACACACATCATTGCTTTTGCACTGTGTGCTATAAAAATTCTCGAGGCAGTCACATCACATTCAATGGGACATCTGTTTCCAAGTCACTTCTTGATAAAATGGAAAATAGTGAAGCATCAGATGAACCGGCTTTAGTTGCAGAAAATCTTTCTGTTAGAGTAGTGCTGTCTGTTGACAAACAATTGAAAGTGAAGAAAGAATTTATGGACATCTTTCCAGAGGAGAATTACCCTGCTGAGTTTTCTTATACATCAAAAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGTAGATGTATGCCTTTTCGGAATGTATGTCCAGGAGTTTGGCTCGGAATGTGGCTATCCAAATCAGGGTTGCGTATATATTTCGTATCTTGATTCTGTCAAGTATTTTAGGCCTGAAAGAGAGACTATGACTGGAGAAGCTCTTCGTACCTTCGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGCAAGAAACAAGGTTTCACAACTTGCTACCTATGGGCTTGTCCACCTTTAAAGGGGGATGATTATATACTATATTGTCATCCTGTCACTCAAAAAACTCCAAAGAAGGATAAACTACGGAATTGGTATCATTCAATGCTAAGAAAGGCTGCTGAAGAAAATATTGTTGTTGGTTTAACTAACATGTATGATCATTTCTTTGTTCCTACTGGAAATTGTGACTCCAAAGTATCAGCTGCTTGTTTGCCTTACTTTGATGGAGACTACTGGTCTGGTGCTGCTATGGATATAGCCAGGAAAATTGAACATGAGAGTGGGGGAGAGTATGAAAAGACGTTGAAGAAACTTGTAACCAAAAGAACTAAGGCCATGGGACATGTAAATCCTTCAAAAGAAACTGCCAAAAACATTCTAGTAATGAAAGAACTGGGCCAAATCATTTTGCCTGTCAAGGAAGATTTCATCATGATTCACTTACAGTCTGTATGCATACACTGCCATGAAGTGATAGTGTCTGGGAAGCGATGGTTTTGCACTGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATACTAGTAACTCGCACACTTCTATTGGTGGCAAGAAGCATACACTTTGTCAGGTCCTCATGAATGATATCATTTTTGATACTAAGGAGAATGATATCATCCTTGATAATGGGTTATTTGAGGATAGGCAGAAGTTTCTGAGCTTTTGCCAAAAGAAACTGTTTCAGTTTGACACACTCCGCCAAGCCAAGTATTCTTCAATGATGATACTTCATCATCTAAAGAATCCTACTGTGCCAGTTGGAACAAAATGTAGCATTTGTTTTAAACACAATAATGTATTGCAATGGAACTGGAAATGTGAGATTTGCCCAGAGTTCACTGTCTGCTTTGCATGCTACAAGGAGAGAGGCGCTATTTGCCATGTACACAAGTTGAGTAGAACTTGTTCAGGGAACAAAGAGTCAATGCAGAACTTGATGCAGGAACTGCAGGATGTTATACTGCATGCATCCCAATGTCACTCAACCAGAACTCGACCATGTACTTACCCTCACTGTCTTGAAATTAAAAAGCTGTTTTCTCATGCAAGTAGATGCACCATTCGAGTTTCAGGGGGCTGCCAATATTGTATGAAGGCGTGGATGGGAATCACTGCACACTGTAGGAATTGTAAAGATTCAGGATGTGGCGTCCCACGCTGCATGTGTGGATATGAAGAAGCATGCACGACGGATAGGAATGCAATGAATCGCAGTGTAGAGCTGCAGTTGTGGAGAGAAACAAAGCACCCACTACTCATTGATAACTTTCTCCATGTATATATTGATTGA 3456 0.3964 MALTHPKSQSLNQTLSVLECALIRVASSRITGTFIYVFLHSLDTIEIKMQTEGVLYIYKSNRDSNLRPAADLMIGRIPAKGTPMIKLGFGSEGTGLVCRVGIRFLFADGGTELIPFPVQIVWNNQQFQGTIQGAREECSGIHYEQEQLASDIANMLENWLFIDAASKEEYMNLDTLIKRLETQLNKLHATKYSHKNLNGVSQANVIKYLHSTVCCKGTCTCEQYSKLLLHFDGCRCDDCQICYSLKLRGTDILEHQFEFPNSVITGSVVGENDAPSVSSEAMLPPKKRRKMEGALGVSLINNASSDQLTPKMVQPCSSEALSEFQQHPEPPLSSIYSEVTESNVKEFTISNPMLDSISNVETKNNVIDDTVGQTFKIETVISKGLEPDHVSEEPDFKSHDVKANSNLKETVVGSNANMHSLCKDPRPADIEHIQGRTRFNKVNGTKRVIEPKADQDKETRSSNPTVNTVSLTDFFTSNQLMEHIMSLRRQFVQNPTDEEPENADYICQLCEMGQLYFAQIPIYCYCCSSRIKENANYYQSRGVESDTHHCFCTVCYKNSRGSHITFNGTSVSKSLLDKMENSEASDEPALVAENLSVRVVLSVDKQLKVKKEFMDIFPEENYPAEFSYTSKVILLFQQIEGVDVCLFGMYVQEFGSECGYPNQGCVYISYLDSVKYFRPERETMTGEALRTFVYHEILIGYLDFCKKQGFTTCYLWACPPLKGDDYILYCHPVTQKTPKKDKLRNWYHSMLRKAAEENIVVGLTNMYDHFFVPTGNCDSKVSAACLPYFDGDYWSGAAMDIARKIEHESGGEYEKTLKKLVTKRTKAMGHVNPSKETAKNILVMKELGQIILPVKEDFIMIHLQSVCIHCHEVIVSGKRWFCTECKKFQECERCHTSNSHTSIGGKKHTLCQVLMNDIIFDTKENDIILDNGLFEDRQKFLSFCQKKLFQFDTLRQAKYSSMMILHHLKNPTVPVGTKCSICFKHNNVLQWNWKCEICPEFTVCFACYKERGAICHVHKLSRTCSGNKESMQNLMQELQDVILHASQCHSTRTRPCTYPHCLEIKKLFSHASRCTIRVSGGCQYCMKAWMGITAHCRNCKDSGCGVPRCMCGYEEACTTDRNAMNRSVELQLWRETKHPLLIDNFLHVYID* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0644 1151 Coils Coil 170 190 - -
Apr10g0644 1151 Pfam Histone acetylation protein 592 797 IPR013178 GO:0004402|GO:0006355|GO:0016573
Apr10g0644 1151 SUPERFAMILY RING/U-box 843 911 - -
Apr10g0644 1151 PANTHER CBP/P300-RELATED 403 588 IPR013178 GO:0004402|GO:0006355|GO:0016573
Apr10g0644 1151 PANTHER CBP/P300-RELATED 591 1110 IPR013178 GO:0004402|GO:0006355|GO:0016573
Apr10g0644 1151 PANTHER HISTONE ACETYLTRANSFERASE HAC2 591 1110 - -
Apr10g0644 1151 PANTHER HISTONE ACETYLTRANSFERASE HAC2 403 588 - -
Apr10g0644 1151 SUPERFAMILY TAZ domain 1028 1111 IPR035898 -
Apr10g0644 1151 ProSiteProfiles Zinc finger TAZ-type profile. 1028 1112 IPR000197 -
Apr10g0644 1151 SMART TAZ_2 1029 1110 IPR000197 -
Apr10g0644 1151 SUPERFAMILY RING/U-box 959 1011 - -
Apr10g0644 1151 CDD RING_CBP-p300 517 587 IPR010303 -
Apr10g0644 1151 ProSiteProfiles Zinc finger ZZ-type profile. 862 918 IPR000433 GO:0008270
Apr10g0644 1151 Pfam TAZ zinc finger 1036 1109 IPR000197 -
Apr10g0644 1151 Gene3D - 861 910 IPR043145 -
Apr10g0644 1151 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 556 973 IPR031162 GO:0004402
Apr10g0644 1151 SMART KAT11_2 575 874 IPR013178 GO:0004402|GO:0006355|GO:0016573
Apr10g0644 1151 Gene3D TAZ domain 1026 1137 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0644 Apr-Chr10 15298911 15313442 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Apr10g0644 HAT_KAT11 1.2e-25 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0644 K04498 - aprc:113866525 959.133