Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0643 ATGGCTCAGGCGACGGGGCGGAGCAGGGTGGTCGGAGACTACATCGTCGGGAAGCAAATCGGCGCTGGGTCGTTCTCGGTGGTGTGGCATGGGAGGCACAAGGTGCACGGAACCGAAGTGGCGATTAAGGAGATCGCTACGCTTCGCCTCAACAAGAAGTTGCAGGAGAGCCTTATGTCTGAGATTTACATCTTGAAGCAAATTAATCATCCTAATATAATCTGTTTGCACGATATCATTCAGGTGCCTGGGAAGATACATCTTGTGTTAGAGTACTGTAAAGGGGGAGATCTTTCTTTGTATATTCAACGCCATGGAAGGGTACTTGAGGCAACTGCAAAGCATTTTATGCAGCAGTTGGCTGCTGGCCTTCAAGTTCTTCGGGATAATAACCTTATTCATCGAGACTTGAAACCACAGAACCTTCTTCTCTCCAGAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCACTGCAACCTAGGGGCCTTGCAGAAACTTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTGCAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTTGTTACTGGACGAACACCTTTTACTGGAAACAATCAAATACAGTTACTACAGAACATTATGAAATCAACAGAATTGAAGTTTCCATCTGATAATGCAAGTCTGAGTTCTGAATGCAAAGATTTGTGCCACAAATTGCTACGTCGTAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCATCCATTCCTTTCTCAGAAGCTAACAGAACATGAAGAACCACTGAGGAATAAAAGTTCTTCAAGGCTGGTTGGTGGGTTTCCTTCTACAGTGTCTGACCCTTTGAGACGAACCGAAGAAAATTATCAAGAAGATTGCTTACCTTTCATTTTAGATGATGATTCTAGTGGCCCAGAGGGGAGCCCATCCTTTTCAAGGAAGAAGTCCTTAATGAAGTCTACTTATGGATTTGATCTAAATACTAAATTAGATAAAGCAGAGTCAGCATCTCCTATCTCTAATAACAAAAATTGTACTTCCAAATATGGTAGTATAGCACAAAGATCTGAAAACCCTACACAAAGATTGGACAACCATAAAATTTCAGGAAGAAATCTCACTGATCCTCTGGAATCTCCAGAACAGATATTTGCTAGCCCTTATCCAAAAGTTATAGATTCACTAGAGAATATTGATCAAGAATATGTTCTTGTGTCTGGCCCCCCTATGGATGCTTCATCTTCTTCAGTGAGTGCTTCAAAGCTGAGCCATTCTCCATATAAGTCAGGTAGTTTCCCCAAAGAGTCTTCTAATACAATCACTAGATTAAGTGCTCCAATGCCAATAGTTGGTGTACCTGCCAGTAGCGTATACCAAATTGGAAGTTCAGGAAGTCAAGATTCTGCTCCTGGAACTTCACATGGATCAATGGATACTGGTGATGAACAGCCATCAGCTCACTGCATGACAAGGGTAAAATCATTACAACAGTGTGCATCTGCCATCATGGAATTAGTTAATGAAAAGATGGATGCTGGAAAGCATCTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCAATTTGGAAGCAAGCACTGCACATATGCCATACGCGAGCTGCCTCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCCAGATATAGGAGGAGCACCAGCAAGAAGCATGGTAGTCCTCATTCAGAAGAATGCCTTGATGGAAACACCCTTGGGCCAAAGGATATATTATCTCAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCACGCTGAAGAACTTGCCAAGACCGTTGAGCCTGGAAACACAGAGATGCCAGATGCAATGGAGACTATTTTTCAAGCTGCCCTTGCTTTTGGGAGACATGGGGGTGTGGAAGAGCTCATGGGTGAAATGGAAAGTGCAGCTGCTTTGTATTCAAAAGCTGTCCGTCTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTTATTCTTAATCCTCCACTTTCACTGACAAACTCAGATCGTTACAGGCTTCGGAGTTACATTGATATTCTTAATAACAGGCAAGGTTATTCAAGGTCTCAGCGAATTGCACTTCTGAAATGTGATGATAGTCAAGGCCTTAAGGAAAAGTTTTAG 2199 0.4234 MAQATGRSRVVGDYIVGKQIGAGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIYILKQINHPNIICLHDIIQVPGKIHLVLEYCKGGDLSLYIQRHGRVLEATAKHFMQQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELKFPSDNASLSSECKDLCHKLLRRNPVERLTFEEFFNHPFLSQKLTEHEEPLRNKSSSRLVGGFPSTVSDPLRRTEENYQEDCLPFILDDDSSGPEGSPSFSRKKSLMKSTYGFDLNTKLDKAESASPISNNKNCTSKYGSIAQRSENPTQRLDNHKISGRNLTDPLESPEQIFASPYPKVIDSLENIDQEYVLVSGPPMDASSSSVSASKLSHSPYKSGSFPKESSNTITRLSAPMPIVGVPASSVYQIGSSGSQDSAPGTSHGSMDTGDEQPSAHCMTRVKSLQQCASAIMELVNEKMDAGKHLEAFSIQLVILAIWKQALHICHTRAASAMEGSPNQETSRYRRSTSKKHGSPHSEECLDGNTLGPKDILSQIESEFLREFEHAEELAKTVEPGNTEMPDAMETIFQAALAFGRHGGVEELMGEMESAAALYSKAVRLLVFLLVEGPSLILNPPLSLTNSDRYRLRSYIDILNNRQGYSRSQRIALLKCDDSQGLKEKF* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0643 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Apr10g0643 732 SUPERFAMILY Protein kinase-like (PK-like) 10 440 IPR011009 -
Apr10g0643 732 MobiDBLite consensus disorder prediction 433 459 - -
Apr10g0643 732 CDD STKc_ATG1_ULK_like 20 270 - -
Apr10g0643 732 MobiDBLite consensus disorder prediction 562 598 - -
Apr10g0643 732 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0643 732 MobiDBLite consensus disorder prediction 480 500 - -
Apr10g0643 732 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0643 732 MobiDBLite consensus disorder prediction 367 400 - -
Apr10g0643 732 MobiDBLite consensus disorder prediction 276 301 - -
Apr10g0643 732 Gene3D Transferase(Phosphotransferase) domain 1 5 312 - -
Apr10g0643 732 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 1 707 - -
Apr10g0643 732 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 707 IPR045269 GO:0004674|GO:0006914
Apr10g0643 732 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0643 732 MobiDBLite consensus disorder prediction 480 506 - -
Apr10g0643 732 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Apr10g0643 732 MobiDBLite consensus disorder prediction 575 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0643 Apr-Chr10 15184826 15192885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0643 10 271 CBL-interacting serine-threonine protein kinases AT2G30360 37.313 7.86e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Apr10g0643 Pkinase 4.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0643 K08269 - gmx:100791596 1294.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0643 10 15184826 15192885 Apr10g0643 10 15184826 15192885 ECH