Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0634 ATGGGCAACCTGCTCCTCCAACTCTTCTATGTGTTGGTGTTCCTTCTGATCCCAGTTTCATCTCAACCTAACCAGCTTTTCTATGCTGGATTCGAGGGTGTGGGCAGCAACAACATAACCTTGAATGGTGCAGCAGAAATAGAACAAAATGGAATATTGAAGCTCACAAATGAAACCAGTAGATTAATGGGTCATGCTTTTTATCCAACTCCTTTTCAGTTCAAGAACTCTAGTGATGATAAAGCTTTCTCCTTTTCTTCCTCATTTGCTTTGGTTATTGTTCCTGAGTATCCAAAGCTAGGAGGGCATGGCCTTGCTTTTACAATTGCAACTTCTAAGGATCTCAAGGCTCTTCCAAGCCAATATCTTGGTCTTCTTAACTCAAGTGACATTGGAAACTTCTCTAACCACCTCTTTGCTGTTGAGTTTGACACTGTTCAAGACTTTGAGTTTGGGGACATCAATGACAACCACGTTGGAATTGACATCAACAACTTGGCCTCCAATGCTTCTTCTACTGCAGGTTACTACACTGAGGACAATGGTTCAACCAAACAAAATCTCAATCTCAAAAGTGGGAAACCCATTCTAGCTTGGGTTGATTATGATTCTGCTCAGAATGTTATCAATGTCACACTTTCTGCTTCTTCTACCAAACCCAAGAGGCCAATCTTGTCCTATGCTGTGGATCTCTCACCAATCCTTAAGGATTCCATGTATGTCGGGTTCTCTGCATCAACAGGGTTGCTTGCTAGCTCCCATTACATTTTGGGTTGGAGCTTCAAAATCAATGGAGAAGCTCCACCTCTTGATCTCTCTTCTCTTCCACAGCTTCCATTTGCGGGGCCAAAAAAGAGTCACACATCTTTGATAACAGGAGTTTCAGTCTCTGGTTTTGTTCTTGTATTGTCTGCAATTTTACTTGGCATCTACATGTACAGAAGAAACAAGAATGCTGATGTTATAGAAGATTGGGAGCTTGAGATTGGGCCACACAGGTACTCCTACCAAGAGCTCAAGAAAGCAACAAAAGGTTTCAAAGACAAAGAGCTACTTGGGCAAGGTGGATTTGGTAGAGTTTATAAGGGAACACTGCCAAATTCCAATACACAAGTTGCGGTTAAGAGAATTTCACACGAGTCAAAACAAGGCCTGAGAGAATTTGTATCAGAAATAGCCAGCATAGGCAGGCTTCGCCACCGGAATTTGGTTCAGTTGTTGGGGTGGTGTCGCCGCCGCGGCGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGGAGCTTAGACAAGTACTTATTTGATGAGCCAGAAACAATCCTAAGTTGGGAGCAAAGGTTTAAGGTCATAAAGGATGTTGCTTCAGCACTTTTGTATCTTCATGAGGGCTATGAGCAAGTGGTGATACACAGAGATGTGAAGGCTAGCAATGTGCTGTTAGATGGTGAACTCAATGGAAGACTAGGGGATTTTGGATTAGCAAGGTTGTATGAACATGGGGCTAATCCGTGTACCACAAGAGTGGTGGGTACCTTAGGCTATTTGGCACCTGAGTTGCCTAGGACAGGAAAGGCCACTCCTAGCACTGATGTTTTTGCATTTGGTGCACTTTTACTAGAGGTGGCATGTGGGCTCAGACCAGTTGAGCTAAAGGCATTACCAGAAGATTTGGTTTTGGTGGATTGGGTGTGGAGCAGGTACAGACAAGGGAGAATTCTTGATGTGGTGGACCCAAAACTGAATGGTGTTTTTCATGAAAGAGAGGTGCTCTTGGTGTTGAAATTGGGGCTTATGTGTTCAAATGGTGCCCCCACTGCTAGGCCTAGCATGAGGCAAGTGGTGAGGCTTTTGGATGGAGAAGTTGATTTACCAGATGAGTTGACAAAGTCAGGCGAGATAACTTACCAGGAGGGTTTTGATGAATTCTTGCACTCCCTTGAACCTTATTCCTTCGATAAGATGAGCGCAAGTTCCTATAGTAGAAATAGAGACACGGATGCTAGTTTTCCTTCTACTAATACATCTCTTTTTCTCCAAGGTAGAGGAGAAACAAGGTGA 2055 0.436 MGNLLLQLFYVLVFLLIPVSSQPNQLFYAGFEGVGSNNITLNGAAEIEQNGILKLTNETSRLMGHAFYPTPFQFKNSSDDKAFSFSSSFALVIVPEYPKLGGHGLAFTIATSKDLKALPSQYLGLLNSSDIGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDINNLASNASSTAGYYTEDNGSTKQNLNLKSGKPILAWVDYDSAQNVINVTLSASSTKPKRPILSYAVDLSPILKDSMYVGFSASTGLLASSHYILGWSFKINGEAPPLDLSSLPQLPFAGPKKSHTSLITGVSVSGFVLVLSAILLGIYMYRRNKNADVIEDWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGRVYKGTLPNSNTQVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPETILSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGANPCTTRVVGTLGYLAPELPRTGKATPSTDVFAFGALLLEVACGLRPVELKALPEDLVLVDWVWSRYRQGRILDVVDPKLNGVFHEREVLLVLKLGLMCSNGAPTARPSMRQVVRLLDGEVDLPDELTKSGEITYQEGFDEFLHSLEPYSFDKMSASSYSRNRDTDASFPSTNTSLFLQGRGETR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0634 684 CDD STKc_IRAK 352 618 - -
Apr10g0634 684 Pfam Protein kinase domain 346 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0634 684 ProSiteProfiles Protein kinase domain profile. 346 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0634 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Apr10g0634 684 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Apr10g0634 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 284 IPR013320 -
Apr10g0634 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 7 668 - -
Apr10g0634 684 CDD lectin_legume_LecRK_Arcelin_ConA 28 265 IPR001220 GO:0030246
Apr10g0634 684 SMART serkin_6 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0634 684 Gene3D - 27 272 - -
Apr10g0634 684 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Apr10g0634 684 SUPERFAMILY Protein kinase-like (PK-like) 328 629 IPR011009 -
Apr10g0634 684 Gene3D Transferase(Phosphotransferase) domain 1 423 636 - -
Apr10g0634 684 PANTHER - 7 668 - -
Apr10g0634 684 MobiDBLite consensus disorder prediction 656 684 - -
Apr10g0634 684 Pfam Legume lectin domain 27 275 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0634 Apr-Chr10 14931500 14935126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0634 19 649 Receptor kinase-like Gene Family AT3G55550 60.648 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr10g0634 Pkinase 5.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0634 - - gmx:100801247 1121.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0634 10 14931500 14935126 Apr4g2065 4 29476195 29478370 PCT