Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0601 ATGGATTTCAGTGAGGGTTATGTATCAAATGAGCATCGAGAGCTTCATCGATCAGCAACAGAAAGTGCAGATCCATTGTCTGTTTCTCCATTGCAACTTTCTCCGAAGTCCCCAAGATCTCCCAAATCTCCAAGGTCTCCAAAATCTCCGAGGTCCCCAAAGGTGCAAGGCAAGTGCAGCAATCTAAGTCCAAAGAATCATAGACAATCATGTTCTCAAAAAGATGGACGTCCAAAGAAAGGTGGTTCCGGGGGGAAAGGTACCTGGGGTGGATTGCTTGATGCAGATGACGCGAGCTTTCTTGATCCTAGTGATCCAAACTATGACAGCAGTGAGGAATTTAACCATTCAAATGAAAAGAAACCGTCAACAGATCTCGAGAACTACAAGAAAAAAGCTACGATAATAGTGGAGGAATACTTCGCCACTGATGATGTTGTTGCAACAATGAATGAAATTAAAGAATTAGGGAAACCAGAGTATGGTTACTATTTTGTCAAAAAACTTGTCTCTATGTCCATGGACAGACATGACAAAGAAAAGGAAATGGCTGCTATTCTGTTATCTGCACTTTATGCCGATATATTTGATCCTCCACAAGTTTACAAAGGCTTCAGCAAATTAGTTGAATCAGCAGATGACTTGATGGTAGATATACCAGACACAGTTGATGTTCTAGCACTTTTTATAGCTCGTGCCGTGGTTGATGACATACTTCCTCCTGCATTTTTGAAGAAACAGATGGCCTATTTAACCAAATATTCAAAAGGGGTAGATGTCCTGAAAAAAGCTGAGAAAAGTTATCTAGCAGCCCCTCTGCATGCGGAAATCATAGAGCGGCGCTGGGGAGGTAGTAAGAACACCACTGTTGATGACGTTAAGGCTAAGATAAATAACTTTTTGAAGGAGTATGTTGTAAGTGGTGACAAGAAAGAAGCCTTTAGATGCATCAAAGATTTGAAAGTTCCTTTTTTCCATCACGAAATAGTGAAACGGGCTCTTATAATGGCAATGGAGAGACGTCAAGCAGAATTCCCACTACTAGACCTGTTGAAGGAAGCAGCTGAAGAAGGTTTCATTAACTCTAGCCAAATGTCTAAAGGGTTCGGTCGGTTGATTGACACAGTTGATGACTTATCACTTGACATACCAAATGCACGTGGTATACTACAGCAACTAATGTCTAAGGCAGCATCTGAGGGTTGGTTGTGTGTGTCATCTTTGAAGTCACTTTCAGTGGAGCCCGAAAAGAACTCAATAGAAGATAGCGCTGCCAAAAGTTTCAAGGTAAACACTCAATCCATCATTAAAGAGTACTTCTTATCAGGTGATATATTTGAGGTAAATAGTTGTCTAGAACAAGAGAACAGCAACAACTGTACTGAACTCAATGCAATCTTTGTTAAAAGATTGATAACTCTGGCAATGGATAGGAAGAATAGGGAGAAGGAAATGGCTTCTGTACTGCTTTCTTCATTGTGTTTCCCAGCTGATGACGTTGTAAGTGGTTTTGTGATGTTGATAGAGTCAGCAGATGACACAGCTTTGGATAATCCTGTTGTTGTTGAGGATCTTGCAATGTTTCTAGCTAGAGCAGTGGTTGATGAAGTCCTAGCCCCACAGCACCTTGAAGAGATTGGAACACAGTGTCTGGGGCCAGATTCAATTGGGAGCAAAGTGCTTCAAATGGCAAAGTCGTTACTAAAGGCTAGACTTGCAGGAGAGCGAATCTTAAGGTGTTGGGGAGGTGGGGGAAGCAGCAGGCCTGGATGGGCAGTTGAGGATGTCAAGGACATGATTGGAAAGCTGTTGGAGGAGTATGAGTCTGGAGGTGAAATAAGGGAAGCGTGCCGCTGCATGAAAGAGTTAGGAATGCCATTTTTCCATCATGAGGTTGTTAAGAAAGCTTTGGTGACAATCATTGAAAAGAAGAATGAGAGGTTATGGGGTCTACTTAAGGAGTGCTTTGAATCAGGACTAATAACCATGTATCAAATGGTGAAGGGTTTTGGAAGAGTTGAAGAATCTCTTGATGACTTGGCTTTGGATGTCCCTGATGCTAAAAAACAGTTTGAACACTATGTTGAACGAGCAAAGGCTAATGGATGGTTGGATAATTCATTTTGTTACACAAAACTGGAACATGCAACAGAGAATGGCACCCACTAA 2169 0.4172 MDFSEGYVSNEHRELHRSATESADPLSVSPLQLSPKSPRSPKSPRSPKSPRSPKVQGKCSNLSPKNHRQSCSQKDGRPKKGGSGGKGTWGGLLDADDASFLDPSDPNYDSSEEFNHSNEKKPSTDLENYKKKATIIVEEYFATDDVVATMNEIKELGKPEYGYYFVKKLVSMSMDRHDKEKEMAAILLSALYADIFDPPQVYKGFSKLVESADDLMVDIPDTVDVLALFIARAVVDDILPPAFLKKQMAYLTKYSKGVDVLKKAEKSYLAAPLHAEIIERRWGGSKNTTVDDVKAKINNFLKEYVVSGDKKEAFRCIKDLKVPFFHHEIVKRALIMAMERRQAEFPLLDLLKEAAEEGFINSSQMSKGFGRLIDTVDDLSLDIPNARGILQQLMSKAASEGWLCVSSLKSLSVEPEKNSIEDSAAKSFKVNTQSIIKEYFLSGDIFEVNSCLEQENSNNCTELNAIFVKRLITLAMDRKNREKEMASVLLSSLCFPADDVVSGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLEEIGTQCLGPDSIGSKVLQMAKSLLKARLAGERILRCWGGGGSSRPGWAVEDVKDMIGKLLEEYESGGEIREACRCMKELGMPFFHHEVVKKALVTIIEKKNERLWGLLKECFESGLITMYQMVKGFGRVEESLDDLALDVPDAKKQFEHYVERAKANGWLDNSFCYTKLEHATENGTH* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0601 722 MobiDBLite consensus disorder prediction 1 126 - -
Apr10g0601 722 MobiDBLite consensus disorder prediction 1 20 - -
Apr10g0601 722 Gene3D - 279 411 - -
Apr10g0601 722 Gene3D - 579 711 - -
Apr10g0601 722 ProSiteProfiles MI domain profile. 427 548 IPR003891 -
Apr10g0601 722 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 714 - -
Apr10g0601 722 ProSiteProfiles MI domain profile. 128 249 IPR003891 -
Apr10g0601 722 MobiDBLite consensus disorder prediction 22 39 - -
Apr10g0601 722 ProSiteProfiles MI domain profile. 292 413 IPR003891 -
Apr10g0601 722 MobiDBLite consensus disorder prediction 112 126 - -
Apr10g0601 722 SUPERFAMILY ARM repeat 592 709 IPR016024 -
Apr10g0601 722 Gene3D - 416 571 - -
Apr10g0601 722 Gene3D - 115 269 - -
Apr10g0601 722 SUPERFAMILY ARM repeat 426 585 IPR016024 -
Apr10g0601 722 ProSiteProfiles MI domain profile. 595 714 IPR003891 -
Apr10g0601 722 PANTHER PROGRAMMED CELL DEATH 4 1 714 IPR039778 GO:0045892
Apr10g0601 722 SUPERFAMILY ARM repeat 289 409 IPR016024 -
Apr10g0601 722 SUPERFAMILY ARM repeat 122 286 IPR016024 -
Apr10g0601 722 MobiDBLite consensus disorder prediction 49 69 - -
Apr10g0601 722 Pfam MA3 domain 294 403 IPR003891 -
Apr10g0601 722 Pfam MA3 domain 429 538 IPR003891 -
Apr10g0601 722 Pfam MA3 domain 597 705 IPR003891 -
Apr10g0601 722 Pfam MA3 domain 130 240 IPR003891 -
Apr10g0601 722 SMART ma3_7 596 705 IPR003891 -
Apr10g0601 722 SMART ma3_7 293 404 IPR003891 -
Apr10g0601 722 SMART ma3_7 129 240 IPR003891 -
Apr10g0601 722 SMART ma3_7 428 539 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0601 Apr-Chr10 13537568 13540398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0601 603 691 Eukaryotic Initiation Factors Gene Family AT4G30680 32.609 4.04e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0601 - - gmx:102668745 1249.57