Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g0594 | ATGGCGGGAGCTACAGGAAGAACCCTCTTCACTCTCTCGCTCTCCTCTTCTTCCTCCTTCACACGCCTCTCCCACCTCGCGAGGCATTTCCCAGTCTCCAACCCCGTCGGCCTTTTCCCACGCTTCAGGCCTCTCTGCTCCGTCACCGCGGCACCTGAAACCACAGACCCTACCCAATTGAAGCACTCTATACTCCTTGAGAGGCTCAGAATCAGACACCTCAAGGACACTGCCAAAGCCCCAGAGGAACCCAAAAAGCCCCTGAAGAAGAAGGCAAAGGGTGTTTCTTCGTCTGATGCAGATAATGAGACGATGGTTATGAAGAAGAAGTTAGTTGGGAGTTTTGAGGAGTTAGGAGTGAGTGAAGAGGTTATGGGGGCTGTTAGAGAAATGGGTATTGAAGTTCCCACTGAGATACAGTGTATTGGTGTCCCTGCTGTGTTGGACGAAAATAGTGTGGTTTTGGGGTCTCATACTGGCTCGGGTAAAACCCTCGCCTACTTGCTTCCCCTTGTTCAGTTGCTGAGACGGGATGAACAAATGAATGGAATACTGTTGAAGCCCCGACGTCCCCGAGCTGTTGTGCTTTGTCCAACAAGGGAGTTGTCTGAGCAGGTTTTTCGAGTAGCAAAATCGATAAGTCATCATGCACGATTCAGGTGTACCATGGTAAGTGGTGGTGGCCGGCTTAGGCCTCAAGAGGATTCACTTAATAACCCCATCGATATGGTAGTTGGTACCCCTGGCAGGATTCTTCAACATATTGAAGATGGCAATATGGTATTGGATGAAGCAGACACAATGTTTGATCGGGGATTTGGTCCTGATATACGCAAATTTCTGGGCCCATTAAAAAATCGCGCTTCAAAATCTGATGGCCTAGGTTTTCAGACTGTCTTGGTTACTGCAACTATGACAAAGGCTGTGCAAAAGCTGATTGATGAAGAGTTTCAAGGCGTTGTACATCTGCGCACATCATCGTTGCATAAAAAGATTTCTTCTGCTCGTCATGATTTTATCAAACTTTCAGGTTCTGAGAACAAGCTAGAAGCATTACTTCAGGTACTAGAGCCAAGCCTGGCAAAGGGGAACAAGGTGATGGTTTTCTGCAATACGTTGGATTCCAGTCGTGCTGTGGATCATTTTCTTGGTGAAAATCATATTTCTACTGTGAACTACCATGGGGAGGTACCAGCAGAGCAAAGGGTTGAAAACCTCAGAAAGTTTAAGAGTGATGGTGATGATTGTCCTACATTGGTTTGCACGGATTTGGCTGCTAGGGGTCTGGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCTTTGAACTCTATTGACTACCTTCACCGCACAGGTAGAACTGCTCGTATGGGTGCAAAAGGGAAGGTAACAAGTTTGGTTGCTAAAAAGGACTTGGTCTTGGCTACCAAAATAGAGGAGGCAATAAGGAAGAATGAGAGTTTGGAGGCTATCACAAAAGAAAGTGGCCGAAGGGACGTTGCAAGGACCCAAATCACTGTGCCAAAGGGAAAGAACAAAAAAATGGTTAAAGTTTCACAAGTAAAGAACAAATCTGCTGGCGGTTCAAGGAAAAACGGGTCAAGTATGAAGCCTGGTAAAGGATCACCCTCTGTAAAATCTATGAAAAAAGGGATTAGCGTTTCAAAATCTGTAAAATTTTCCGGTGCAAGTGGCTTGAGAAAAGATTCTTTGGAGAACGAACAAACAAGTAAAAGGGTCAGTGCCACCAAATCTACAAATTCTAAACTCAGTGTTGTGGGGTTTAGGGGGAGGAATTCATCATCTTTGTGA | 1815 | 0.4567 | MAGATGRTLFTLSLSSSSSFTRLSHLARHFPVSNPVGLFPRFRPLCSVTAAPETTDPTQLKHSILLERLRIRHLKDTAKAPEEPKKPLKKKAKGVSSSDADNETMVMKKKLVGSFEELGVSEEVMGAVREMGIEVPTEIQCIGVPAVLDENSVVLGSHTGSGKTLAYLLPLVQLLRRDEQMNGILLKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDMVVGTPGRILQHIEDGNMVLDEADTMFDRGFGPDIRKFLGPLKNRASKSDGLGFQTVLVTATMTKAVQKLIDEEFQGVVHLRTSSLHKKISSARHDFIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLDSSRAVDHFLGENHISTVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLVLATKIEEAIRKNESLEAITKESGRRDVARTQITVPKGKNKKMVKVSQVKNKSAGGSRKNGSSMKPGKGSPSVKSMKKGISVSKSVKFSGASGLRKDSLENEQTSKRVSATKSTNSKLSVVGFRGRNSSSL* | 605 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g0594 | 604 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 35 | 535 | - | - | |
Apr10g0594 | 604 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 190 | 476 | IPR027417 | - | |
Apr10g0594 | 604 | Gene3D | - | 75 | 324 | IPR027417 | - | |
Apr10g0594 | 604 | SMART | ultradead3 | 132 | 333 | IPR014001 | - | |
Apr10g0594 | 604 | MobiDBLite | consensus disorder prediction | 523 | 542 | - | - | |
Apr10g0594 | 604 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 348 | 500 | IPR001650 | - | |
Apr10g0594 | 604 | MobiDBLite | consensus disorder prediction | 75 | 100 | - | - | |
Apr10g0594 | 604 | MobiDBLite | consensus disorder prediction | 577 | 604 | - | - | |
Apr10g0594 | 604 | CDD | DEADc | 124 | 324 | - | - | |
Apr10g0594 | 604 | Pfam | DEAD/DEAH box helicase | 137 | 312 | IPR011545 | GO:0003676|GO:0005524 | |
Apr10g0594 | 604 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 | 35 | 535 | - | - | |
Apr10g0594 | 604 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 144 | 323 | IPR014001 | - | |
Apr10g0594 | 604 | Pfam | Helicase conserved C-terminal domain | 348 | 459 | IPR001650 | - | |
Apr10g0594 | 604 | Gene3D | - | 334 | 502 | IPR027417 | - | |
Apr10g0594 | 604 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 113 | 141 | IPR014014 | GO:0003724 | |
Apr10g0594 | 604 | CDD | SF2_C_DEAD | 336 | 468 | - | - | |
Apr10g0594 | 604 | SMART | helicmild6 | 377 | 459 | IPR001650 | - | |
Apr10g0594 | 604 | MobiDBLite | consensus disorder prediction | 493 | 604 | - | - | |
Apr10g0594 | 604 | MobiDBLite | consensus disorder prediction | 75 | 97 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g0594 | Apr-Chr10 | 13476456 | 13488387 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g0594 | 112 | 481 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 26.753 | 1.25e-37 | 142 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g0594 | - | - | vun:114182370 | 891.723 |