Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0559 ATGGAACGTAATACCCCCTTTGAAATTTGTCATCCTCAAAACAACAGGATTCGTCCCAAAAGTGTGCAATTTGATTATAACATCCTCTCACATGAGGACCATGCCAGGCTCATATATGTTAATGACCCTATCACCACCAATGAAACCTATGAGTTCACAGGAAACCAGATTAAAACCAGCAAATACACTCTTCTTACCTTCTTGCCCAAGAATCTATTCATTCAGTTTCACCGGGTTGCTTATCTCTATTTCCTTGCTATTGCTGCCCTCAATCAGCTTCCTCCCCTTGCTGTTTTTGGCCGAACCGTGTCCCTTTTCCCCCTCTTGTTGGTGCTCTGCGTCACCGCCATCAAGGATGCATACGAGGATTGGCGCAGGCACAGGGCTGATCGCAATGAAAACAATCGAGAGTGTCTGGTTCTTCAATCTGCTCGGTTCTGCTCCAAGAGATGGAAAAATATGCAGGCTGGCGACGTCGTTAAAATCTTTGCTGATGATATGATTCCTGCTGACATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGATTGCCTATATTCAGACGATGAATTTGGATGGAGAATCCAATTTGAAGACAAGGTATGCTAAGCAGGAAACAGCTTCAGCCGTATCGCCAGAAGCTTGTTCTGTCTCTGGAGTTATTAGATGTGAGCAACCTAATCGAAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGGCTTAAGTTTCCCCTTAACCAGTCAAACATTGTGCTGCGTGGTTGCGTGCTGAAGAACACGGATTGGATAATTGGTGTTGTGGTTTATGCAGGAAAGGAAACAAAAGCAATGATGAACAGTGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAATTTACATGAATAGAGAAACCTTTTGGTTGTCAGTTTTCCTTTTCATCATGTGTGCAGTTGTGGCCATTGGGATGGGTCTCTGGCTGGTACGCCACAAGGATCAGCTTGATACCTTGCCTTACTACAGAAAAACCTACTCCAACAATGGGCCAAACAATGGAAAGAAGTACAGATATTATGGCATACCGATGGAAACATTATTTTCCTTTTTGAGTTCTATTATAGTGTTTCAGATAATGATCCCGATATCACTTTACATCACAATGGAATTGGTTCGTTTGGGTCAGTCTTACTTTATGATAGAAGACAAGGACATGTATGATGCTAACTCTGGATCAAGGTTCCAATGTAGATCATTGAATATCAACGAAGATTTGGGTCAAATACGCTATGTGTTTTCAGACAAGACAGGAACACTAACAGAAAACAAGATGGAGTTCCAGAGAGCCAGTGTGCATGGAAAGAACTATGGGAGTTCCTTGCTTATGAGTGATAACAATACAGCAGCAGCCGTTAGTGGTAAACGAAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAGCTAATGGCATTGTTGCAGAAAGACTCAAATAGCGATGAAAGAATTGCTGCTCATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCCATTGTTAGTAGCAGTAGGTCTTCTAGTTACGGAAAAGGAGAATCAAATGAAGATATAGAAGTTATAGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTACATATGGATATACTCTATTTGAGCGAACATCTGGACATATTGTTATTGACGTCAATGGTGAGAAACTCAGGTTGGAGGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTGTTATCCGGTTTCCTGACAATGTTGTAAAGGTGTTGGTTAAAGGCGCTGATACTTCAATGCTTAGCATTTTAACAAATGACAATGCAAGCAAGGATGGCCTACGGCATGTAACCCAGAGTCATTTGACTGAATATTCTTTGCAAGGTTTAAGAACTCTTGTAATTGCCTCCAGGGATCTGTCAAATGCTGAGTTTGAGAAGTGGCAAAGCATGTATGAAGATGCCAGCACTTCATTGACTGATCGAACTGCAAAACTACGTCGAACAGCCGCTCTAATAGAATGCAACCTAAAACTACTTGGAGTAACTGGAATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTCACTGGTGATAAGCAAGAGACTGCAATTTCAATTGGTCTTTCCTGTAAACTTCTCGGTGCTGAAATGCAACAGATAATTATAAATGGAACTTCAGAGGTTGAGTGCAGAAATCTCTTGGCTGATGCTATAGAGAAATATGGTGTGAGATCTTCAAGTAGAGGTCATCAGAATCTGAAGCACAAAACTGATGCTAGACATGGTGGCCCTGATATTCCCAATGACACAAAGTCATTGAGCATGCCCAAGTGGAATCCAGGAAACGAGGAAGGAACTAATGCTCAGTTGGCACTCATAATTGATGGAACCAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATATGATAAAAAGCCGCACAGATGATCTGACATTAGCTATAGGTGATGGGGCAAATGATGTGTCAATGATCCAAATGGCCGATGTTGGTGTTGGAATATGTGGGAACGAAGGGCGCCAAGCAGTGATGGCGTCAGATTTTGCTATGGGACAATTTCAGTTCTTGAAAAGATTACTTCTGGTTCACGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGCTATTTTGGTATATATTATGCACTGCTTTTTCTACAACTTCGGCATTGACAGATTGGAGTAGTGTACTTTATTCTGTGATATACACATCTATCCCTACTATCTTTGTTGGTATTTTGGACAAAGACTTGAGTCAGAGGACACTTTTGCAGTATCCAAAATTGTATGGTGCAGGTCACCGGCATGAGGCTTACAATATGCAGTTATTTTGGATCACAATGATTGACACACTATGGCAGAGCCTTGTTCTCTTCTACATTCCCCTATTCACCTATAAGGACAGCACAATTGATATATGGAGCATGGGCAGTTTATGGACAGTTTCAGTTGCTATCGTTGTAAATGTACACTTGGCTATGGATATTTACAATTGGGTATTAATTAATCATGTTGCCGTATGGGGATCAATAGTCATTACATACGGTTGTGTGATGGTATTGGATTCTATACCTGTCTTTCCTAATTACGGGACAATTTATCATTTGGCAAAGTCCCCTACATATTGGATTACAATTTTGCTTATAACAATTCTGGCATTGTTCCCTCGCTTTTTTTGCAAAGTTGTCTTTCAAATATTTTTGCCTTCGGATATCCAGATTGCTAGAGAAGCTGAGATAATGAGTAAACAACATGATGATTTGCAGTCAAGGCAACCAATTTCTAATTAA 3519 0.4155 MERNTPFEICHPQNNRIRPKSVQFDYNILSHEDHARLIYVNDPITTNETYEFTGNQIKTSKYTLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLLVLCVTAIKDAYEDWRRHRADRNENNRECLVLQSARFCSKRWKNMQAGDVVKIFADDMIPADMVLLGTSDQSGIAYIQTMNLDGESNLKTRYAKQETASAVSPEACSVSGVIRCEQPNRNIYEFTANMEFNGLKFPLNQSNIVLRGCVLKNTDWIIGVVVYAGKETKAMMNSAASPSKRSKLEIYMNRETFWLSVFLFIMCAVVAIGMGLWLVRHKDQLDTLPYYRKTYSNNGPNNGKKYRYYGIPMETLFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDKDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVHGKNYGSSLLMSDNNTAAAVSGKRRWKLKSEIAVDSELMALLQKDSNSDERIAAHEFFLTLAACNTVIPIVSSSRSSSYGKGESNEDIEVIDYQGESPDEQALVSAASTYGYTLFERTSGHIVIDVNGEKLRLEVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMLSILTNDNASKDGLRHVTQSHLTEYSLQGLRTLVIASRDLSNAEFEKWQSMYEDASTSLTDRTAKLRRTAALIECNLKLLGVTGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLGAEMQQIIINGTSEVECRNLLADAIEKYGVRSSSRGHQNLKHKTDARHGGPDIPNDTKSLSMPKWNPGNEEGTNAQLALIIDGTSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDMIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGNEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVLYSVIYTSIPTIFVGILDKDLSQRTLLQYPKLYGAGHRHEAYNMQLFWITMIDTLWQSLVLFYIPLFTYKDSTIDIWSMGSLWTVSVAIVVNVHLAMDIYNWVLINHVAVWGSIVITYGCVMVLDSIPVFPNYGTIYHLAKSPTYWITILLITILALFPRFFCKVVFQIFLPSDIQIAREAEIMSKQHDDLQSRQPISN* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0559 1172 MobiDBLite consensus disorder prediction 776 802 - -
Apr10g0559 1172 Gene3D - 535 672 IPR023299 GO:0000166
Apr10g0559 1172 Gene3D - 110 282 - -
Apr10g0559 1172 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 35 1168 - -
Apr10g0559 1172 Gene3D - 435 460 IPR023299 GO:0000166
Apr10g0559 1172 CDD P-type_ATPase_APLT_Dnf-like 54 1038 - -
Apr10g0559 1172 MobiDBLite consensus disorder prediction 780 794 - -
Apr10g0559 1172 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Apr10g0559 1172 PRINTS P-type cation-transporting ATPase superfamily signature 878 897 - -
Apr10g0559 1172 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 848 964 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr10g0559 1172 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 675 742 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr10g0559 1172 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 358 448 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr10g0559 1172 Pfam Phospholipid-translocating ATPase N-terminal 38 103 IPR032631 -
Apr10g0559 1172 Gene3D - 691 918 IPR023214 -
Apr10g0559 1172 SFLD Haloacid Dehalogenase 409 929 - -
Apr10g0559 1172 Gene3D - 422 434 IPR023214 -
Apr10g0559 1172 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1145 IPR023298 -
Apr10g0559 1172 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 52 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr10g0559 1172 Pfam E1-E2 ATPase 137 383 - -
Apr10g0559 1172 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Apr10g0559 1172 Pfam Cation transport ATPase (P-type) 527 616 - -
Apr10g0559 1172 SFLD p-type atpase 409 929 IPR044492 -
Apr10g0559 1172 Gene3D - 408 421 - -
Apr10g0559 1172 Pfam Phospholipid-translocating P-type ATPase C-terminal 906 1146 IPR032630 -
Apr10g0559 1172 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 35 1168 - -
Apr10g0559 1172 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 707 IPR023299 GO:0000166
Apr10g0559 1172 SUPERFAMILY Calcium ATPase, transduction domain A 135 278 IPR008250 -
Apr10g0559 1172 SUPERFAMILY HAD-like 412 923 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0559 Apr-Chr10 12710963 12721794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0559 14 1170 Primary Pumps ATPases AT5G04930 55.241 0.0 1293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0559 K14802 - gmx:100788740 2045.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0559 10 12710963 12721794 Apr10g0559 10 12710963 12721794 ECH