Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0558 ATGAATCATAGAAAGGCAATAGAGGAGCTTGTGAGAGGGCGTGAGTTTGCCAATCAGCTTAGAGAAGTGATTCATGGAGATGATGAGTCAGGAAGTGGAATCCCATTTGCACAACATCTTGTCAATAACGTTCTTAGTTCATTCACAAACACCCTCTTCCTTTTGGACAATTATCCCACTGTTGAATCTCATGATATGCAACAAAGAAACTCTTGCTTTCTTAGCCCCTCTAAATCTGAGGACTCTCAAGAAAGTTGCAAGAGTTTCACCAGTAAGAACAGAAGAGGATGTTACAAGAGAAGAAAAACTACAGAAACATGGGAGAAGGTGTCAAAAACTCTAATAGATGATGGCCACCAATGGAGAAAGTATGGCCAAAAAGCCATACTCACCGCCAAATACTCAAGGAACTATTACAGGTGCACTCACAAGTATGATCAGAGTTGCCAAGCAACAAAACAGGTGCAGAGAATTCAAGAGGAACCTCCCTTGTATAGGACCACCTATTATGGTCAGCACACATGCAAAGACTTGCTAAACTCTGAGATCATACTAGATTCCACTTCCACTCCTGACACTTCTATATTGCTTAGCTTTAATAACACCTTCCCTAATCCAACCAAACAAGAGTGCCCCTTTTTATCATCATCTTTTCCCTCATCATCAGTGAACAAGGAGGAGATAATTCCCTCATCTTCCTCAGATAATTACCTGCTCTCCCCAGAGCCCATTTTGGATGATTCTTCATGGCATAACAATGTCGCTCTATCATCATCCAATCAAAGGGATGTCATGTCTTCGGTCTTGTGTGATTCTGTTGACCTTGATGATGTCTTTCAGTCCTTAGTTGGATTTTGA 858 0.4126 MNHRKAIEELVRGREFANQLREVIHGDDESGSGIPFAQHLVNNVLSSFTNTLFLLDNYPTVESHDMQQRNSCFLSPSKSEDSQESCKSFTSKNRRGCYKRRKTTETWEKVSKTLIDDGHQWRKYGQKAILTAKYSRNYYRCTHKYDQSCQATKQVQRIQEEPPLYRTTYYGQHTCKDLLNSEIILDSTSTPDTSILLSFNNTFPNPTKQECPFLSSSFPSSSVNKEEIIPSSSSDNYLLSPEPILDDSSWHNNVALSSSNQRDVMSSVLCDSVDLDDVFQSLVGF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0558 285 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 278 IPR044810 GO:0003700
Apr10g0558 285 Pfam WRKY DNA -binding domain 116 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr10g0558 285 SMART WRKY_cls 115 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr10g0558 285 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 278 - -
Apr10g0558 285 SUPERFAMILY WRKY DNA-binding domain 111 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr10g0558 285 Gene3D WRKY domain 90 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr10g0558 285 ProSiteProfiles WRKY domain profile. 110 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0558 Apr-Chr10 12705955 12707436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0558 5 267 WRKY Transcription Factor Family AT3G56400 34.559 1.02e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr10g0558 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0558 - - lja:Lj3g3v0459900.1 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0558 10 12705955 12707436 Apr10g0558 10 12705955 12707436 ECH