Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0552 ATGGCTTCTTCAACGTATTCGCTGTCCTTTCTTCTTCTTCTAATGCTAATTTTCCAAAGTGTTAAACACTGTTCATCTATATCGTTCTCTCTCTCCGTCGAAAAACCCGAAGAAGAGGTCATAGTGTCATCACCAAAAGGGACATTCACGGCGGGCTTTTATGCCGTAGGCCAAAATGCATATTCCTTCGCCATATGGTTCACCCAAACACACCCTAACCAAAACGTCGTTGTCGTTTGGATGGCCAACCGGGACCAACCGGTGAACGGAAAACGCTCCAAACTTACGCTTCTGAAAACGGGGAACCTCGTATTAACCGACGCCGGGCAGTCCAACGTTTGGTCCACAAACACGGCCTCGTTCAAACCACTGGAGTTGCATTTACACGACACCGGCAATTTAGTTCTCCGAGAAAGTGATTCCTTATCCATTCTGTGGCAAAGCTTCGATTTCCCAACGGACACACTTCTTGCGGGTCAAATCCTGAGGAAGAACACGAACCTGGTTTCCTCAAGAAGCGAAAGTAACTATTCGTCTGGTTTCTACAAGCTCTTCTTCGACTTTGAGAACGTTCTCCGTCTTCTTTACCAAGGCTCTCGCGTTTCAAGCGTTTACTGGCCAGACCCTTGGCTTCAGAGCAATGACTTTGGTAGATCCACTTACAACGATAGTAGGGTTGTTGTACTAGAAGCTTCGGGGAACTTGGTTTCTTCCGATAACTTCACATTCAGAACTTGTGATTATAAGACGGTGCTCCAACGAAGGTTGACCCTTCATCATGACGGAATCGTTCGTGTGTATAGTAGGAAAGATGGTGAAGAGAAGTGGTCAGTCTCGGGGCAGTTTCGGTCACAACCATGTATGGTTCATGGGATTTGTGGACCCAATAGTGTTTGTAGTTATGATCCAAGAAGGGGTAGAAAGTGTTCGTGCATTCCAGGGTATAGTTGGATCAATAAGCAAGATTGGTCTGAAGGTTGTAAAGCAAATTTTCCACTTTGGTGCAACATCAACAAGACCCTGCATGAGTATGAGTCTCGCTTCTTACATTTACCCAAAGTCGACTTTTATGGATATGACTATGGTTTCTTTAGAAATCACACCTTTGAGCAGTGTAAGAATCTATGCTTGAGCTTGTGTCAGTGCAAAGGTTTCCAACACTCCTTTTCGGAGGAAAATGGTGTCTTTCAGTGCTATCCAAAGACACAGTTGCTAAATGGGCGTGGTGGTCATAGTACGGGATCAATCTTCTTGCGATTGCCTTTGTCTTATGACTATGAGAGTCCCACACAAGATGATGATGGTAAGGGCTTGGCTTGTTTGACAAATGATGGAGGAGTGAGACAGTTGGAAAGATCATATGTCAAAGGAAAAGAAAATGGGTCTGTGAACGTCATGCTTTGGTTCGCAAGTGGCTTGGGAGGGGTTGAAATACTGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAATAACAAGAAGCTACAAGTGGGTGTAGAGAAACAAGGGTATGCTCTTGCTGCAGCAACGGGATTTCAGAAATTTACTTACTCTGAGCTGAAACAAGCTACGAGAGGTTTCAGTCAAGAGATTGGAAGGGGTGGTGGAGGAATTGTATATAAGGGTGTGTTATCTGATAATCGTGTTGTAGCGATAAAGAGGCTGCATGAAGTGGCAAACCAAGGAGAAACTGAGTTTTTGGCTGAAGTGAGCATCATCGGAAGGCTTAACCACATGAACTTGATTGACATGTGGGGGTATTGTGCCGAGGGAAAGCACAGATTGTTGGTTTATGAGTACATGGAAAATGGTTCTTTAGCTGAGAATCTCTCGTCAAATTCAAGTGCACTTGATTGCGTTAAGAGGTATAACATTGCTCTGGGTACTGCAAGGGGTCTTGCCTATTTGCATGAAGAGTGTTTGGAGTGGATTTTGCATTGTGATATTAAGCCACAGAACATACTTCTTGACTCTGATTATCAACCCAAGGTGGCAGATTTTGGCTTGTCTAAGCTACTAAATAGGAACAACCTCAACAATTCAAGCTTCTCAAGGATAAGAGGAACAAGGGGTTACATGGCACCGGAATGGGTTTTCAACTTGCCCATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTCGTCTTGGAAATGATAACCGGAAAAAGCCCAACAACGGGTGTCCAGATCACAGAAATAGGAACAGAATCACATCATCACGAGAGGTTGGTGACATGGGTGAGGGATAAAAGGAGAACAGGATCAGAAATGGCATCATCTTGGGTGGATCAAATCGTTGACCCTGCTTTGGGATCAAATTATGATGTGAATAAGATGGAGATATTGGCAACTGTGGCTTTGGAATGTGTAGAGGAACAGAAAGACGAGAGACCCAGCATGAGTCAAGTTGCTGAGAGGCTTCAAAGTCACGAACATGACTCTTGA 2448 0.4424 MASSTYSLSFLLLLMLIFQSVKHCSSISFSLSVEKPEEEVIVSSPKGTFTAGFYAVGQNAYSFAIWFTQTHPNQNVVVVWMANRDQPVNGKRSKLTLLKTGNLVLTDAGQSNVWSTNTASFKPLELHLHDTGNLVLRESDSLSILWQSFDFPTDTLLAGQILRKNTNLVSSRSESNYSSGFYKLFFDFENVLRLLYQGSRVSSVYWPDPWLQSNDFGRSTYNDSRVVVLEASGNLVSSDNFTFRTCDYKTVLQRRLTLHHDGIVRVYSRKDGEEKWSVSGQFRSQPCMVHGICGPNSVCSYDPRRGRKCSCIPGYSWINKQDWSEGCKANFPLWCNINKTLHEYESRFLHLPKVDFYGYDYGFFRNHTFEQCKNLCLSLCQCKGFQHSFSEENGVFQCYPKTQLLNGRGGHSTGSIFLRLPLSYDYESPTQDDDGKGLACLTNDGGVRQLERSYVKGKENGSVNVMLWFASGLGGVEILCIFLVWCFLFRNNKKLQVGVEKQGYALAAATGFQKFTYSELKQATRGFSQEIGRGGGGIVYKGVLSDNRVVAIKRLHEVANQGETEFLAEVSIIGRLNHMNLIDMWGYCAEGKHRLLVYEYMENGSLAENLSSNSSALDCVKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRNNLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSPTTGVQITEIGTESHHHERLVTWVRDKRRTGSEMASSWVDQIVDPALGSNYDVNKMEILATVALECVEEQKDERPSMSQVAERLQSHEHDS* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0552 815 CDD B_lectin 43 152 IPR001480 -
Apr10g0552 815 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 815 - -
Apr10g0552 815 Pfam D-mannose binding lectin 78 167 IPR001480 -
Apr10g0552 815 Pfam S-locus glycoprotein domain 237 316 IPR000858 GO:0048544
Apr10g0552 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 195 IPR036426 -
Apr10g0552 815 SMART blect_4 32 152 IPR001480 -
Apr10g0552 815 Gene3D - 34 150 IPR036426 -
Apr10g0552 815 Gene3D Phosphorylase Kinase; domain 1 491 600 - -
Apr10g0552 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Apr10g0552 815 SMART serkin_6 525 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0552 815 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Apr10g0552 815 CDD PAN_AP_plant 331 421 - -
Apr10g0552 815 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 9 815 - -
Apr10g0552 815 ProSiteProfiles Protein kinase domain profile. 525 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0552 815 Gene3D Transferase(Phosphotransferase) domain 1 601 815 - -
Apr10g0552 815 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Apr10g0552 815 CDD STKc_IRAK 531 809 - -
Apr10g0552 815 MobiDBLite consensus disorder prediction 794 815 - -
Apr10g0552 815 SUPERFAMILY Protein kinase-like (PK-like) 509 809 IPR011009 -
Apr10g0552 815 Pfam Protein kinase domain 528 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0552 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0552 Apr-Chr10 12668318 12670882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0552 515 812 Trihelix Transcription Factor Family AT5G38560 44.186 1.46e-70 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr10g0552 Pkinase 1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0552 - - gmx:100808940 1157.13