Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0538 ATGAGAGGATTAGATTACTACCTGCCAACAATGGCTATGTTGTTGGTACAGTTTCTTTATGCAGGTAATAGTCTTGTCGTAAAAACTGTTCTCTTACAGGGAATGAGCCCCAGGGTGTTCATAGTGTATCGCCATGCTTTTGCAACAACTGTGATTGCTCCCATTGCTTATTTCCAAGGGAAAAATTCTGCCTCATATTCCTTAAATTTAAGAAGCTTTTCCTTGATATTCTTCACCGCACTAATTGGCATTGCATTGAGTCAAAACTTATATGCTGAGGGTCTATCTCTGACCTCTGCTTCAATCGCAAGTGCAATGGCCAACTTTGTTCCAGCAGTCACATTTGTTATGACAACTTGTTTAGGAATGGAGAAAGTGAATATTCGAAGCTCAAGATCTTTAGCCAAGATAGTAGGGACAATGGTGTGTGTGAGTGGAGCAATGTGCATAGCTTTCTTGAAAGGTCCAAAGCTATTAAATGTAAAAAACCTGCCATCACAATCCATCATGGCTTCAGGAAGTGAGAGCTGGTTGCTTGGTTGTCTAACTCTCTTTGGATGTTGTTGTGCCTGGTCAGTTTGGCTCATTGTACAGGTTCCAGCCACTGAAAGCCACCCACATCACTTATCTTTTTCAGCTTGGATGTGTTTTATGGGAACATTAGAATCAGCAGTAGTGGCACTATTACTGGAGCCAGACCTAAATGCTTGGAAGATTAATTCTCTACTTGAACTTGGTTGCGCTTTAACTTCAGGGGTAATGGGATCATCAGCAGCGTATTTTCTGCAAGCATGGTGCATTTCAAGGAGAGGTCCTCTCTTCTGTTCGATGTTCAATCCTCTTTCCACAGTGATTGTCACAATATTGGCTGCTTTGTTACTTCATGAGCAAATCTACATTGGAAGCTTGACAGGCGCAATTGGAGTGATCATTGGCTTGTACGTTGTGCTTTGGGGTAAAGCTGAGGAAGTTGTAATGAAAGTGGAGACTGTCACAAAATCGATGGTTAATCCCTCAGAGGAAGTAAAAATATTGATGAAGGAAACTTCTAAAGAAGTACATTGTAAAACTGATTTGAAAGAACCCCTTTTATTTGCTGAATCTCTACTAACATAG 1116 0.4086 MRGLDYYLPTMAMLLVQFLYAGNSLVVKTVLLQGMSPRVFIVYRHAFATTVIAPIAYFQGKNSASYSLNLRSFSLIFFTALIGIALSQNLYAEGLSLTSASIASAMANFVPAVTFVMTTCLGMEKVNIRSSRSLAKIVGTMVCVSGAMCIAFLKGPKLLNVKNLPSQSIMASGSESWLLGCLTLFGCCCAWSVWLIVQVPATESHPHHLSFSAWMCFMGTLESAVVALLLEPDLNAWKINSLLELGCALTSGVMGSSAAYFLQAWCISRRGPLFCSMFNPLSTVIVTILAALLLHEQIYIGSLTGAIGVIIGLYVVLWGKAEEVVMKVETVTKSMVNPSEEVKILMKETSKEVHCKTDLKEPLLFAESLLT* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0538 371 PANTHER WAT1-RELATED PROTEIN 10 349 IPR030184 GO:0016021|GO:0022857
Apr10g0538 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
Apr10g0538 371 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Apr10g0538 371 Pfam EamA-like transporter family 179 317 IPR000620 GO:0016020|GO:0016021
Apr10g0538 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 320 - -
Apr10g0538 371 PANTHER WAT1-RELATED PROTEIN 10 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0538 Apr-Chr10 12457717 12461617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0538 1 364 Nodulin-like Gene Family AT4G30420 48.919 4.09e-124 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0538 - - gmx:100812331 493.812