Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0535 ATGAGAAAACGTATCAACATGGAAAGTGATGCTGAGTACAACTTTGCCACATCCTCCACCACCTCCTCCACCACCACCACCACCCACACCAACACTTCTAGCACATCCTCTACCTCAAATTCAGTTACATGCACCAAAACTCCACCAAATGAAGCCAAAAAAGCTAAAAACTTGGAAGAAAATGGAAAGGACCCAAAAGGGTGTAAGAAGAGGCAGCGAGAAAATAGCAATCATCACACATATAGAGGTGTAAGAATGAGAAATTGGGGCAAATGGGTATCTGAGATCCGTGAGCCAAGAAAGAAGTCAAGAATATGGCTTGGAACATACCCTACAGCAGAAATGGCAGCAAGAGCACATGATGTAGCTGCCTTAGCCATAAAGGGTCATTCAGCATATCTCAATTTCCCTGAATTGGCTCAACAACTTCCAAGGCCAACAACAACATCACCAAAGGACATTCAAGCTGCAGCAGCAAAGGCTGCAAACACTACATTTCAAATGGTTAAGTATTGTCAAGTTGAAGAAGCTGAACCAAGACAAGCAGAACAAGCTTCATCTTCAACTCTATCATCAATGGACAATACTCATGAGTCTTCATCTTCTCCCTCTACCCTTGATGATGACACTTTGTTTGACCTACCAGATCTTTTCCCTGATCAAAACCATGCACTTTGCTCCAATTCTTATTCTTGGAATGTATGTGCAGTTGACAGTGGATTAAGGCTTCAAGAACCTCTTTTTTGGGAGAACTACTAG 759 0.4242 MRKRINMESDAEYNFATSSTTSSTTTTTHTNTSSTSSTSNSVTCTKTPPNEAKKAKNLEENGKDPKGCKKRQRENSNHHTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQQLPRPTTTSPKDIQAAAAKAANTTFQMVKYCQVEEAEPRQAEQASSSTLSSMDNTHESSSSPSTLDDDTLFDLPDLFPDQNHALCSNSYSWNVCAVDSGLRLQEPLFWENY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0535 252 MobiDBLite consensus disorder prediction 180 208 - -
Apr10g0535 252 Gene3D AP2/ERF domain 80 138 IPR036955 GO:0003700|GO:0006355
Apr10g0535 252 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 252 - -
Apr10g0535 252 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Apr10g0535 252 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Apr10g0535 252 SUPERFAMILY DNA-binding domain 80 138 IPR016177 GO:0003677
Apr10g0535 252 MobiDBLite consensus disorder prediction 52 71 - -
Apr10g0535 252 MobiDBLite consensus disorder prediction 1 82 - -
Apr10g0535 252 CDD AP2 81 139 IPR001471 GO:0003700|GO:0006355
Apr10g0535 252 PANTHER ETHYLENE RESPONSE FACTOR 6 252 - -
Apr10g0535 252 MobiDBLite consensus disorder prediction 11 50 - -
Apr10g0535 252 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Apr10g0535 252 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Apr10g0535 252 Pfam AP2 domain 81 130 IPR001471 GO:0003700|GO:0006355
Apr10g0535 252 MobiDBLite consensus disorder prediction 177 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0535 Apr-Chr10 12425416 12426174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0535 70 248 AP2-EREBP Transcription Factor Family AT2G44940 54.369 4.49e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr10g0535 AP2 8.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0535 - - gmx:100776436 322.398