Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0534 ATGTTTGGGCGTGGACCAAGGAGGAGTGATAACACCAAATATTATGAAGTTCTTGGTGTTTCAAAAACTGCTAGTGAAGATGAAATCAAGAAGGCCTATAGAAAGGCAGCAATGAAGAACCATCCAGATAAGGGTGGAGATCCTGAAAAGTTCAAGGAGTTAGGTCAAGCATATGAAGTTTTAAGTGATCCTAAAAAGAAAGAACTCTATGATCAATTTGGTGAGGATGCCCTTAAAGAAGGGACGGGAGGAGGAACCTCGTTTCATAATCCATTTGATATATTTGAATCATTTTTTGGAGGAGCAAGCTTTGGTGCAGGTGGTAGTTCACGAGGTAGAAGACAGAAGCATGGTGAAGATGTGGTGCATTCTTTAAAGGTTTCCTTGGAGGATGTGTATAATGGCACAACAAAGAAACTATCACTTTCTAGAAACATATTATGCCAAAAATGTAAAGGGAAAGGTTCAAAAAGTGGAACAGCTGGGAATTGTTTTGGATGCCAAGGCACAGGTATGAAGATTACAAGAAGGCAGATTGGTCTAGGCATGATTCAACAAATGCAACATGTCTGTCCTGAATGCAGAGGAACTGGTGAGGTCATCAGTGAGAGAGATAGATGCCCTCAGTGCAAAGGAAACAAGGTTACCCAGGAAAAGAAGGTGCTGGAGGTGCATGTTGAGAAGGGGATGCAGCAGGGTCACAAGATTGTTTTTGAAGGACAAGCAGATGAAGCTCCTGACACAATCACAGGTGACATTGTTTTTGTATTACAAGTAAAGGAGCACCCAAGGTTCAGGAGGGACCATGATGACCTCTATATTGATCATAATCTCAGCTTAACCGAGTCACTCTGTGGCTTCCAGTTTGCTGTCACGCATCTTGATGGTAGGCAACTTCTGATCAAATCAAACCCTGGGGAAGTCATCAAGCCAGGTCAACATAAAGCAATAAATGATGAGGGAATGCCACAACACAATAGGCCCTTCATGAGGGGACGCCTGTACATCAAGTTTGATGTTGATTTCCCAGACTCAGGGTTTCTGTCCCCTGAACAATGCCAGTTATTAGAAAAGGTATTACCTCAGAAGACCAGCAAACAATTGTCAGATATGGAGCTTGATGATTGTGAGGAGACCACTTTGCATGATGTCAACATGAAGGAGGAGATGAGACGAAAGCATCAACACCAATTCCATGAGGCATATGATGAAGATGATGATGAGCCATCTGGTCCGTCTAGAGTACAATGTGCTCAACAGTAG 1263 0.4276 MFGRGPRRSDNTKYYEVLGVSKTASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPKKKELYDQFGEDALKEGTGGGTSFHNPFDIFESFFGGASFGAGGSSRGRRQKHGEDVVHSLKVSLEDVYNGTTKKLSLSRNILCQKCKGKGSKSGTAGNCFGCQGTGMKITRRQIGLGMIQQMQHVCPECRGTGEVISERDRCPQCKGNKVTQEKKVLEVHVEKGMQQGHKIVFEGQADEAPDTITGDIVFVLQVKEHPRFRRDHDDLYIDHNLSLTESLCGFQFAVTHLDGRQLLIKSNPGEVIKPGQHKAINDEGMPQHNRPFMRGRLYIKFDVDFPDSGFLSPEQCQLLEKVLPQKTSKQLSDMELDDCEETTLHDVNMKEEMRRKHQHQFHEAYDEDDDEPSGPSRVQCAQQ* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0534 420 Gene3D DnaJ domain 10 109 IPR036869 -
Apr10g0534 420 Gene3D - 110 262 - -
Apr10g0534 420 SMART dnaj_3 12 66 IPR001623 -
Apr10g0534 420 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Apr10g0534 420 MobiDBLite consensus disorder prediction 390 411 - -
Apr10g0534 420 Gene3D - 263 344 - -
Apr10g0534 420 Gene3D - 148 214 - -
Apr10g0534 420 CDD DnaJ 14 63 IPR001623 -
Apr10g0534 420 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Apr10g0534 420 PRINTS DnaJ domain signature 15 33 IPR001623 -
Apr10g0534 420 PRINTS DnaJ domain signature 46 66 IPR001623 -
Apr10g0534 420 PRINTS DnaJ domain signature 66 85 IPR001623 -
Apr10g0534 420 SUPERFAMILY HSP40/DnaJ peptide-binding domain 119 263 IPR008971 GO:0006457|GO:0051082
Apr10g0534 420 CDD DnaJ_C 119 345 - -
Apr10g0534 420 CDD DnaJ_zf 148 214 IPR001305 GO:0031072|GO:0051082
Apr10g0534 420 Pfam DnaJ C terminal domain 122 343 IPR002939 -
Apr10g0534 420 SUPERFAMILY Chaperone J-domain 9 108 IPR036869 -
Apr10g0534 420 Pfam DnaJ central domain 148 214 IPR001305 GO:0031072|GO:0051082
Apr10g0534 420 PANTHER CHAPERONE PROTEIN DNAJ A6 7 420 - -
Apr10g0534 420 Hamap Chaperone protein DnaJ [dnaJ]. 10 389 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Apr10g0534 420 Pfam DnaJ domain 13 71 IPR001623 -
Apr10g0534 420 ProSiteProfiles Zinc finger CR-type profile. 135 219 IPR001305 GO:0031072|GO:0051082
Apr10g0534 420 MobiDBLite consensus disorder prediction 390 420 - -
Apr10g0534 420 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 7 420 IPR044713 GO:0006457|GO:0030544
Apr10g0534 420 SUPERFAMILY HSP40/DnaJ peptide-binding domain 264 355 IPR008971 GO:0006457|GO:0051082
Apr10g0534 420 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 145 217 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0534 Apr-Chr10 12408054 12415822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0534 8 71 C2H2 Transcription Factor Family AT1G74250 49.315 5.91e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0534 K09503 - gmx:100800590 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0534 10 12408054 12415822 Apr10g0534 10 12408054 12415822 ECH