Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0514 ATGATGTTCCTTCACCGGCATCTTTGCACCACCACGACAACCTCAAAGTCATCGAGTATTCCTTGGAGGTACAGAAAGGTTGCTGTGAGAAGAGGGCAACAAGCCCTCACTGAGTACCTCCATGCCACAAGGTGCATCCCTTATGTCTATGCTGACCAAATTGCCAAAAATTCTCTTCTTTCCCTCACCAACCTCATCACCAAGTTGGGAACTTTTTCACCTTCCAACTTCCCCAACAACCTTAACAAGTTCCTCAGGTACAACCCCATCAATGAATTTGAGTTCTTCTTTGAAAGCATTGGCATTCACCCCTCTCACCACCCTTCCCTCTGGCCCCACAACAAGTACTTCTTTTCTGAAGATGAGTCTCTTTTTGATGCTGCTTGTGCTCTCTCTGAATTTGGGTTTCCATGGGATAAGCTTGGTGTGTTGTATGTTGAGTGTGGTTCTGTGTTCAAATGGAGTGCTTCTGAGTTGAAGGGTAGGCTCTGTTGGTTCAAAAGGTATGGTTTTTGCAATGTGCAGGTTATGGGGGTGTGTTTGGCTTTCCCTTCTGTGTTCGGTGGTCAATTGGGTAGTGAGATTGATGCTTTGCTTGCTGATTTGAGGTTGGTGTTTTTGGACTTTGATTTGGAAGGGTGTGTTGAGGGGAATGTGGATGCTTGGTATGAGGTGTGTAGGAAGATCAAGGTGTTTTATGATTTGAATGGTGGTATTGGTAAGATTGGGGAGGTCATTGGAAGGAATAAGCATGTCATTGTTGAGCATGGAGAAGGGGAGTTAGTCCAAGCAGCTGGGTTTTTCAGTAGATTCGGGGCAAAGAAGGAGGAACTGGCTCGGTTGATTCTAGAGAGCTCGGAGTTGTTGAGTCTTGATTTGGAGATGCAGGTAATTAATGTGTTGAAGCTGTTGAAACACTTTGGAATGAGCTCCAATGGTGTTAAGGATGTTAGGACGAATTACGCTCATGCATTGGGAACGATAAGAATGGCTAATCTGCCCAATGTAATGAAGGCTTTGGGTTTAAATGAATGGTTCTTTGATAAAATTAAGGATGGGAATCATATGTTGTTAGTAAATTATGTCGCAAGCTATCCCGATGAAAACCTAGATAAACGTTATCTAAGTTGTTTAGAGAAAATTCGTGCTTCAAGAACCTCGGCCCACTGTATCGGCAAGTTGAATTTCTTGCTTGCCATTGGCTTTGGAGAAAATGCTTTGACCATGAATGTCTTTAGTCACTTGCATGGAACAGGTGGCGAGTTAAAAACAAGATTTGATTGCCTTCTACATTTAGGGATTGAATTCTCGAAGGTCTTTAAGATGATCAGCATTTGTCCTAGGATTCTAAACCATAAACCTGAACTTTTAGAGCAGAAGATTAGTTTCTTCTGTCAGGAAATGGGGAAGTCAGTAGAGGACTTGGTCAGTTTTCCAGCATTCTTATGCTTTGACTTAGAGAACCGCATTAAGCCTAGGTACAGATTCCATATGTGGCTTTTAGAAAAGGGTCTGTCTTCCAAAAAGTATTCCATTGCATCCCTGATTGCATCCAGCAACAAGACTTTTGTTGCTCGCGCTTTTAAAATTCACCCAGCTGCTCTGAAACATTGGTTTGAGCAATCCTATCCAAGCAAATTGCCAGTGCAATGA 1653 0.4277 MMFLHRHLCTTTTTSKSSSIPWRYRKVAVRRGQQALTEYLHATRCIPYVYADQIAKNSLLSLTNLITKLGTFSPSNFPNNLNKFLRYNPINEFEFFFESIGIHPSHHPSLWPHNKYFFSEDESLFDAACALSEFGFPWDKLGVLYVECGSVFKWSASELKGRLCWFKRYGFCNVQVMGVCLAFPSVFGGQLGSEIDALLADLRLVFLDFDLEGCVEGNVDAWYEVCRKIKVFYDLNGGIGKIGEVIGRNKHVIVEHGEGELVQAAGFFSRFGAKKEELARLILESSELLSLDLEMQVINVLKLLKHFGMSSNGVKDVRTNYAHALGTIRMANLPNVMKALGLNEWFFDKIKDGNHMLLVNYVASYPDENLDKRYLSCLEKIRASRTSAHCIGKLNFLLAIGFGENALTMNVFSHLHGTGGELKTRFDCLLHLGIEFSKVFKMISICPRILNHKPELLEQKISFFCQEMGKSVEDLVSFPAFLCFDLENRIKPRYRFHMWLLEKGLSSKKYSIASLIASSNKTFVARAFKIHPAALKHWFEQSYPSKLPVQ* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0514 550 PANTHER CGI-12 PROTEIN-RELATED 13 543 IPR003690 GO:0003690|GO:0006355
Apr10g0514 550 Pfam mTERF 422 523 IPR003690 GO:0003690|GO:0006355
Apr10g0514 550 Gene3D Transcription termination factor 3, mitochondrial 62 209 IPR038538 -
Apr10g0514 550 Gene3D Transcription termination factor 3, mitochondrial 223 540 IPR038538 -
Apr10g0514 550 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 13 543 - -
Apr10g0514 550 SMART mt_12 472 506 IPR003690 GO:0003690|GO:0006355
Apr10g0514 550 SMART mt_12 440 471 IPR003690 GO:0003690|GO:0006355
Apr10g0514 550 SMART mt_12 279 310 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0514 Apr-Chr10 12195417 12199557 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr10g0514 mTERF 1.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0514 - - gmx:100812245 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0514 10 12195417 12199557 Apr10g0514 10 12195417 12199557 ECH