Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0497 ATGAATGCTCATGTTTTTGGCACCAGTGAACCGATGTCGTTTCAGGATGTTCCGGCACCGACACCCGCGGTGGAGTTCTGCCGCAGTTCCAGCTACCGCAACATTTTCTTGGCGGAGAATTGGGCCGAGCTGCCGTTGAAGGAGGACGACGCTGATGATATGGTAATCTACGGCGTTTTGCGCGAAGCCGCCACCAAGGGATGGTTCCCCGCCAGTGACAGTGGGGTGAAAGTGGAAAATGAGAGTGAAAATAGTGTTACTGTGGCGGAGCGTGAGACTCACGTGCAGCCAAGGAAAGGGGTGAGTTACCGGGGCGTGCGGAGGAGGCCGTGGGGTAAGTACGCGGCTGAGATAAGGGATCCTAAGAGGAACGGCGTGAGAGTGTGGCTTGGAACTTATGAAACGGCTGAAGATGCAGCATTGGCTTATGATAGAGCCGCGTTTAAAATGCGCGGCTCGAAAGCCAAGCTGAATTTTCCTCATTTGGTTGGGTCCGATCAAGCCGAGCCAGTTAGGATTACACTGAAGAGGCGTTCACCAGATGTTGGTTTGTCTCGCCCTTCGCCGTCTGTAGTGGCTGCTAAGCGGAGTAAAGATGGCTCTTTAGCGGCTTTGGAGCTGGATGGCTCAAATGTGTGGCAGTTTTCTATTGACATGAATAGGTGGCAATAA 672 0.5312 MNAHVFGTSEPMSFQDVPAPTPAVEFCRSSSYRNIFLAENWAELPLKEDDADDMVIYGVLREAATKGWFPASDSGVKVENESENSVTVAERETHVQPRKGVSYRGVRRRPWGKYAAEIRDPKRNGVRVWLGTYETAEDAALAYDRAAFKMRGSKAKLNFPHLVGSDQAEPVRITLKRRSPDVGLSRPSPSVVAAKRSKDGSLAALELDGSNVWQFSIDMNRWQ* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0497 223 Pfam AP2 domain 103 152 IPR001471 GO:0003700|GO:0006355
Apr10g0497 223 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Apr10g0497 223 PRINTS Ethylene responsive element binding protein signature 142 162 IPR001471 GO:0003700|GO:0006355
Apr10g0497 223 PANTHER DNA-BINDING DOMAIN 15 188 IPR044808 GO:0003700|GO:0009873
Apr10g0497 223 SMART rav1_2 102 166 IPR001471 GO:0003700|GO:0006355
Apr10g0497 223 PANTHER BNAC04G53270D PROTEIN 15 188 - -
Apr10g0497 223 SUPERFAMILY DNA-binding domain 103 161 IPR016177 GO:0003677
Apr10g0497 223 CDD AP2 103 162 IPR001471 GO:0003700|GO:0006355
Apr10g0497 223 Gene3D AP2/ERF domain 102 162 IPR036955 GO:0003700|GO:0006355
Apr10g0497 223 ProSiteProfiles AP2/ERF domain profile. 102 160 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0497 Apr-Chr10 12017824 12018495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0497 26 218 AP2-EREBP Transcription Factor Family AT2G44840 52.551 9.36e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr10g0497 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0497 K09286 - gmx:100804762 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0497 10 12017824 12018495 Apr10g0497 10 12017824 12018495 ECH