Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0494 ATGGAGAGGGTTGTGGAGCCGAAGGTACTTCCCCGGAACTTGCCTGTCCTGGTTGAGGTATCGAATGCACACACGGCTGCAGCAAGAGAGGCTAGTCAGAGACTGAATCGTCAGGAGCTTTCAAGTGTTGGTGGGATTTCAGCAAGAGAAGTGAATCAATTGTCCAAAACAAGTGATGTGCCTATGACACGTCTGGCCTCCATCAGAGAAGTGGCTCAGTTAACGAATGCAAGGATTTTTTTGGTAAGAGAAGATATGGGATTCGATGCTCGATCCTCTGAAGAATCCCTCACCTTTGAGCCTACTACAACATGGAAAGGAAAGGCCTCTTTATCAGAAGAAGAATTTTTACTGGATGTTGAGACATTGAAGGGAAGTAGTGATTCTCTTGAGGATGTTGGTCCAAGTTTATTTGCTGGTGCTAGTCATCCTCCCGAACCTGTTGATACAGATCTTATGAGAACAGTTTATGTACCAATAGGTCAAAACAAATCTGAGGCTGGATGCTTAATTAAGAACTTGTCCATGAATGGCCCTTTCCTGGAAGATCTCTCAATTCGTGTTCCTGGGAAGAAGCCAAGTCCAGCTGTTTTCTCGCGTGGAGAAAGTCTGGTCGAGGAGCTAAATGACATAGGGAACTTATCCTCGCCGATTTTGGGTCCTCGAGCATCACAAAATACTGAGAACTCTCTCCTTCCTCCAGATTCTGATGACAAAGAATGTGTTTGGGATGCTTCTTTACCTCCTAGTGGCAATGTTAGTCCACTCAGTAGTATTGATAGTACCGGTGTTGTCACGGCAATGAGCGTTGTTAATAGTTGTGCTAGTACATATCGGAGTGATGCAATGACTAGTGATGGCATGCTTAGTTTAGACAGGAACTGTGATAGTACTAAAGGAAGTGTAAGGGGCGATTCACTAGAGAGTGCAAAAACTAGTGCTAGTCGGGCAAGTGATAGCAGTGGTCTCAGCGATGACAGCAACTGGAGCAACATTACTGGTGGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTATCCGATTACGGGATGGGATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGATGTGGTGATATTGGAAGTGTATATCTCTCAGAGTTAAGTGGAACTCGGTGTAATTTTGCAATGAAAGTTATGGATAAGGCATCTCTAGCAAGCAGAAAGAAGCTGACCAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCAACTTTGTATTCACATTTTGAGACTGATCGATTCTCATGTTTGGTAATGGAATATTGTCCTGGGGGTGATCTGCACACTTTAAGGCAGCGGCAACCTGGGAAACATTTCTCAGAATATGCTGCACGCTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTAGTGTATAGAGACCTTAAACCTGAAAATGTGTTGGTCCGAGATGATGGTCACATAATGCTATCAGATTTTGATCTTTCCCTCAGATGTGCTGTTTCACCTACTCTTATTAGAACTTCCTATGATGGTGACCCTTCAAAACGTGCTGGTGGTGCATTCTGTGTACAGCCTGCATGTATTGAGCCAACATCAGCTTGCATCCAACCTGCTTGTTTTATTCCTCGGTTATTTCCTCAGAAAAACAAGAAGTCACGGAAGCCAAGAGCTGAACCTGGGTTGCCTTCCAGCACACTTCCGGAGCTCGTTGCTGAGCCTACTCAAGCTCGATCCATGTCCTTTGTTGGCACTCATGAGTACCTTGCCCCTGAAATTATCAAAGGAGAAGGTCATGGCAGTGCAGTCGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAGACCCCCTTCAAAGGGTCTGGAAACCGTGCTACACTGTTCAATGTAGTAGGTCAGCAGCTCAGGTTTCCTGAATCACCTGCGACCAGCTATGCCAGCAGGGATCTGATCCGTGGCTTGTTAGTGAAGGAGCCACAGCATCGTCTTGGGGTTAAAAGGGGTGCAACTGAGATCAAACAACACCCCTTCTTTGAAGGTGTGAACTGGGCATTGATAAGGTGCAGTACACCGCCAGAAGTGCCAAGACCGGTGGAAAGTGAACTTCCTGGGAAGGTTGGACTGGTTGATACTGTTCCAGTTGGTAACACTAGTAAGAGGATAGTAGGTACTGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2277 0.4554 MERVVEPKVLPRNLPVLVEVSNAHTAAAREASQRLNRQELSSVGGISAREVNQLSKTSDVPMTRLASIREVAQLTNARIFLVREDMGFDARSSEESLTFEPTTTWKGKASLSEEEFLLDVETLKGSSDSLEDVGPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGCLIKNLSMNGPFLEDLSIRVPGKKPSPAVFSRGESLVEELNDIGNLSSPILGPRASQNTENSLLPPDSDDKECVWDASLPPSGNVSPLSSIDSTGVVTAMSVVNSCASTYRSDAMTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGGANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCNFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYSHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDGDPSKRAGGAFCVQPACIEPTSACIQPACFIPRLFPQKNKKSRKPRAEPGLPSSTLPELVAEPTQARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVESELPGKVGLVDTVPVGNTSKRIVGTDMKSGGKYLDFEFF* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0494 758 MobiDBLite consensus disorder prediction 218 232 - -
Apr10g0494 758 SMART serkin_6 365 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0494 758 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 73 758 - -
Apr10g0494 758 Gene3D Phosphorylase Kinase; domain 1 363 448 - -
Apr10g0494 758 CDD STKc_phototropin_like 363 717 - -
Apr10g0494 758 ProSiteProfiles Protein kinase domain profile. 365 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0494 758 Gene3D Transferase(Phosphotransferase) domain 1 593 715 - -
Apr10g0494 758 Gene3D Transferase(Phosphotransferase) domain 1 449 517 - -
Apr10g0494 758 MobiDBLite consensus disorder prediction 216 247 - -
Apr10g0494 758 Pfam Protein kinase domain 595 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0494 758 Pfam Protein kinase domain 366 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0494 758 SUPERFAMILY Protein kinase-like (PK-like) 347 720 IPR011009 -
Apr10g0494 758 MobiDBLite consensus disorder prediction 289 342 - -
Apr10g0494 758 MobiDBLite consensus disorder prediction 290 337 - -
Apr10g0494 758 PANTHER FLIPPASE KINASE 1-RELATED 73 758 - -
Apr10g0494 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0494 Apr-Chr10 11946090 11950435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0494 1 758 AGC Kinase Gene Family AT2G44830 65.582 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Apr10g0494 Pkinase 6.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0494 - - gmx:100792314 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0494 10 11946090 11950435 Apr10g0494 10 11946090 11950435 ECH
Apr10g0494 10 11946090 11950435 Apr4g2393 4 32897881 32902038 PCT