Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0455 ATGCAAGTGTTGAAGATGAACACACTGCATGTTGTGCTGGGAGCAGTGTTGGTGGTGTTGATGCATGTATTCAAAGTGTTGGTGTTGAGGCCAAGATCACTGAGAGCAAAGCTTCAGAGGCAAGGGATTCATGGTCCTTCACCTCACTTCTACTTTGGCAACATCCCAGAAATGAAGACCCTTTTGCTTCAAGTTCAGTCAGCACCAACCATACAAGTCCAAGACAAACATGTTTCTATTTCTCATACATGGCCCTTCACTTTGTTCCCTCACGTCCAAAAGTGGATCCAAAAATATGGGCCCATATACTTGTTTTCTTCTGGGAATATACAGTGGCTAATGGTGGCAGATATAGAGATGGTGAAGGAGGTCATCATGCACACATCTTTGAACCTAGGGAAGCCTACATATCTATCCAAAGATTTGGGGCCACTCTTGGGCCAAGGTATATTGTCATCAAGTGGGCCAATTTGGGCACATCAGAGGAAGATAATTGCTCCTGAACTATACCTTGATAAGGTGAAGGCAATGGTTAATCTGATAGTTGAATCAACAAATATAATACTAAGGTCTTGGGAGACTAGACTTGATAGTGAGGGAGGAGTTTTAGAGATTAAAATTGATGAAGATCTCCGAAGTTTGTCAGCTGACATAATCACCAGAGCTTGTTTTGGGAGCAATTATAGTGAAGGGAAAGAAATATTCTCAATGCTTAGAGACCTTCAAAAACTCTTGTCCAAGATACATGCTGGAATTCCAGGCTATCGATTCTTGCCAAACAAAAGCAACAGACAGATGTGGAGATTGGAGAAAGAGATACACTCAAAGATATTAAAGATTGTAAGACAACGCCAGGAGGAAACTCATGAGCAGGATCTTTTACAAATGATACTTGAGGGTGCAAAGAATTGCAAGAGTAGTGATGGCCTATTTTCAAATTCCATCTCACGTGAAAGGTTTGTGATAGATAATTGCAAAAATATATTCTTTGCTGGACATGAGACTACTGCAATCACAGCATCATGGTGCTTAATGCTGTTAGCTGTACACCAAGATTGGCAAGATCGTGCTCGTGCTGAGGTGCTTGAAGTTTGTGGAAACGGTGCTCCAGATGCAAGTATGCTTAAGAGCATGAAAACGTTAACCATGGTGATTCAAGAGACTTTAAGGCTTTATTCACCAGCAGCATTTTCTGTTAGAACAGCTTTCCAAGATGTTAGTTTAAAGGGTATCCTAATTCCAAAAGGAATGAATATTCAGATTCCAATTCCATTACTGCATCAAGATCCTGAATTCTGGGGTCCTGATGCTCACATATTCAATCCAGGAAGATTTGAAAATGGGGTGCTTGAGGCATGCAAGGTACCAGGAGCTTATTTACCATTTGGAGTAGGCGCACGGGTCTGCGTTGGACAGCATTTAGCCATGACAGAACTGAAGGTGATTTTATCTCTCATTCTGATGAAGTTTCAACTCTCTCTCTCACCAAGTTACTGCCATGCACCTGCTTTCCATTTGGTTATAGAACCTGGCCATGGAGTAGTTCTTAAGATGACAAGAATGTAA 1566 0.4144 MQVLKMNTLHVVLGAVLVVLMHVFKVLVLRPRSLRAKLQRQGIHGPSPHFYFGNIPEMKTLLLQVQSAPTIQVQDKHVSISHTWPFTLFPHVQKWIQKYGPIYLFSSGNIQWLMVADIEMVKEVIMHTSLNLGKPTYLSKDLGPLLGQGILSSSGPIWAHQRKIIAPELYLDKVKAMVNLIVESTNIILRSWETRLDSEGGVLEIKIDEDLRSLSADIITRACFGSNYSEGKEIFSMLRDLQKLLSKIHAGIPGYRFLPNKSNRQMWRLEKEIHSKILKIVRQRQEETHEQDLLQMILEGAKNCKSSDGLFSNSISRERFVIDNCKNIFFAGHETTAITASWCLMLLAVHQDWQDRARAEVLEVCGNGAPDASMLKSMKTLTMVIQETLRLYSPAAFSVRTAFQDVSLKGILIPKGMNIQIPIPLLHQDPEFWGPDAHIFNPGRFENGVLEACKVPGAYLPFGVGARVCVGQHLAMTELKVILSLILMKFQLSLSPSYCHAPAFHLVIEPGHGVVLKMTRM* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0455 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 516 - -
Apr10g0455 521 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 516 - -
Apr10g0455 521 Pfam Cytochrome P450 92 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Apr10g0455 521 SUPERFAMILY Cytochrome P450 83 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr10g0455 521 Gene3D Cytochrome P450 32 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0455 Apr-Chr10 11315507 11318752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0455 120 518 Cytochrome P450 AT5G24900 47.922 4.46e-137 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0455 K24544 - gmx:100780335 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0455 10 11315507 11318752 Apr10g0455 10 11315507 11318752 ECH