Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0445 ATGTCCTTCAATCAATCAAAGTCGGACAAGAACGACGCCGTTTACCGAAAATCCGGGCGATCCTCCAGCTTCAATCAGCAGAGAGGTTTCTCAGGCAAGGGTGGTGGTGCTGGCGGCGCCGGTGGTGGCGGGACCGCGCCGTCGATCAATTCGGCTTCGTCACTCTCCTCTAACCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAAACTAGGGTAAACCCTTCCCCAGTGAATTCGACAGTGTTCAACAGTGCTGCTGCTTCCCGGACCATAAATAATGGTACCCATGTACAGCCTCAACTACAAGATGGGCCAGTTACAAAGTCATCTGAATCCTCAGCTGCACAGAGGAGTGCTAGAATTGTTTCAAAAGCTCCAACTTCTCAGCCACCCCCCTTGAGTTCTGATGCAGTTCCTCCTACAAGCCCTGCTAAGGGAGATTTGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTGTTCCTGGCTTTATTAATGGGGTGGCAATTCCTGCTCGTACAAGCTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCTTCACGACCCTTATAGATCTGTGCCTTCAGTGCCAATTCCTCCTGTTCCAAAGCATCAGCAACCACCTAGGAAAGATGCTAGTGCCACTGAGCAATCTAATGCTGGGGAGACTCATATAGGGGGGACTAAGGCAAAAAAGGATTCTCAGGTGTCAGCTTTGATCCCAACAAGCCAGATGCTGAAGCCTTCTGTTCCTGTCACTGGGATTTCAATGGCAACGCCATATCACCAGTCGCAGGCTTTACAGTTTGGTGGTCCTAACTCACAGATTCAATCTCAGGGTACATCAACGGCATCCCTCCATATGCCTATACCAATGCCTTTACCAATTGGAAATGCTACACAAGTACAACAGCCGGTTTTTGTTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAGGGCCAAAACATGACTTTTGCTCATCAAATAGGTCATCAGTTGCCCCATCAATTAGGCAACATGGGCATTGGCATCAGCCCCCAATATCCCCAACAGCAAGGAGGAAAATTTGCTGGTCCTCGAAAAACTACTCCTGTGAAAATAACTCATCCTGAGACACATGAAGAGCTGAGGCTTGATAAAAGAACAGATGCATATTCGGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAGCATACCTTCTCAATCCCAACCTGTTAAATCTTTTGCGGCTTCTCATCCTATGAATTATTATCCTTCCAGCTCTTATAATTCCAATTCTCTCTATTATTCACCTTCTACTTCTCTTCCATTAACAAATAGTCCAATATCTCCTAATTCACAGTCACCAATATTTAATTATCCTGTGAACCATGGTCTGCAAAATGTGAGTTTCATGAATCCATCCTCACTTAGTTCCCTGCCTACTAATAAAGCTAGCACTCCTTCTGGCATTGTTGAGCCACCCATGCTGGAATTCTCTCATGATGTGTCTAATATGACGCCATCAGCTCCATCGGTGGTTGCATCTGTGACTATTAAGCCAAGTGGTATGTCTGCTGTTGTGGAGTCCAATTCCAGTATTTCTGGTGTTCAAAATGGAGAATCCCCTAGTTCAGCAGCATCTTGTGATATCAACTCCTCTGTGCCACAAAAAGGGCCTGAAATTTGTTCAGAAACCCCTTCACAACATTCTAAGTCATCTATTGCAGATTCTGTCTCAGTTGTGTCTAATAATGAAGGAGGGAAGGAATCTCTTAGTAGGTCCAACTCCTTGAAAGATAATCAAAAGAAACCAGGGAAGAAAGGTCAACCATCGGAGCATCAGGTTTCTGTACAATCTCCGACAGTGGCTAATATGCCTTCTCGAGCTGTTGACCATGGTATATCTGATACTGGAGGTTCTGAACCTGTTGGAACTATAACAAACTGTTCTATGGCTAATACCGCTGAAGATCTTCCAACATCTGATACAATATCTAGTAGTATTTCTACTGCTGTTGAAATGAAGACCAATGAGTCTGCAGAAGTTTCTGCTAAAGGATCTGGGGCTCAAGTTGCTGACAGGGTGAACAATCATAAGCATGATAAGATAGATGAATTAGCTGGAGATCTGAAGCCTACTGATCTTCCGGAAACAATGTCAAAGCATGTAAAGGATGGCTCAGAGAATGCTACCAGTGATTCAATGTCTCTTTCTGTGTCGGGTATCAAGGACAGGCCAATTATAGAGCCAAATAAGGTGAAAACTGCATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCCGATCTTTATAACGCATACAAGGGACCGGAGGAAAAGAAAGAAGCTGTCTTAAGTTCAGAGAGTACAGAAAATGTTTCTACTTCTGGAAGTTTAAAGCAGTTGTCCAAAGATGCTGCTCAGTTAGATGCTGTAGCAAGTGAGAAGCGTGGTCACAAGAAAGCTGAGCCTGATGACTGGGAAGATGCTGCTGACATGTCTACACCCAAACTGGAGGTTCATGATAAATCTCAGCAGGTTAGTGATGGAAGTGGAAGTACAGCCAAAAAGTACTCTCGTGATTTCCTTTTGAAATTTGCAGATCAATTCACTGATCTTCCTGAAGGTTTTGAAATCACGGCAGACATTACCGAGGCTTTGGTGATTGCCAATATTACTAGTCCTCATGTTATTGAGCGTGATTCACATCATAGTCCTGGAAGAATTGTGGATAGAGGTGGGATGTCTAGGATGGATCGCCGTGGGAGTGCAGTAATGGAGGAAGACAGATGGAGTAAAGTTTCTAGTGCTTTTCATTCTGGACGTGGTTTGGATGGTATTGGAGGCAATGCAGGATTTCGATCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCGCAGGCACCTATGCAATATGCTGGAGGGATCCTTTCTGGGCCGATGCAATCTGTGGGAAATCAAGGTGGAATCCAGAGAAATAGCCCTGATGGGGAGAGGTGGCAGCGTGCTGCTAGCTTCCAGCAAAGGGGTTTAATTCCTTCTCCCACCCAAACTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTACTGTAACAGATGTGGAAGAGACAAAGCAGAGGCAGTTGAAAGCTATCTTGAACAAACTGACTCCTCAGAACTTTGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTTACCCTCACTGGTGTCATCTCACAAATATTTGAAAAGGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGTTTGCATCTGGCTTCTGAGTTACCTGATTTTAGTGAGGAAAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAGAGGGAACAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTGATGAAGAAAGGGAGGAGAGACGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAATGTATCAAGAAGTTACTGGGTCAATGTCAGGATCCTGACGAGGAAGACGTTGAAGCTTTGTGCAAACTAATGAGTACTATTGGGGAGATGATCGACCATCCCAAAGCCAAGGAACATATGGATGCATATTTTGAACGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAGTGGCAACAAAGGAGGAAAGTAGAAGGTCCAAAGAAGATTGAGGAGGTACACAGGGATGCTGCTCAAGAGAGGCAGGCCCAAGCTGGTAGGCTGGGTCGTGGTCTTGGCAACAATCAACCGGCAAGAAGGAATCCCATGGATTTTGGTCCAAGAGGATCACCTGTGCTGTCTCCTAATCCTCAAATGGGTGGAGTGCGTGGTCTGCCTAATCAAGCACGCGGATATGGTCCTCAGGATGCTCGATTTGAGGAAAGGCAATCTTATGAGGCTAGGACTTTGTCTGTAACTTTGCCTCAAAGACCTGTGGGTGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCTATTAGAGGATCAACAGCAATTTCTAATTTGCCTAACTCTGATGTGACCTCAGGTCTTAATGGTTACAGCAATTTATCAGAGCGCACATCATCTAACTCTAGGGAGGATCTTGCGGCAAGATATGGTACTGATAAATTTTCAGGTCCATCTGCGTATGATCAATCAAGTGCTCTGGAGCGTAATATAAACTATGGTAACAGAGACTTAAGGAATGCAGATCGGAATCATGACAGACTTGTTGCAACCTCACCTCCTGGCCAATTGCAAGGGTCAATAGTCTCCCAGAATGCTTCTACAGAGAAGGTTTTTCCAGAAGAAGGACTGAGGGACATGTCCCTGTCAGCAATCAGAGAATACTACAGTGCTAGAGATGAGAATGAACTTGCTTTATGTGTCAAAGATTTGAACTCTCCAAGCTTCCATCCTTCTATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGAAAGGATGCGGAAAGAGATCTTTTGGCCAAACTGCTTGTCAACCTTGTGAGGTCTCAGGATGGCACCTTGAGTCAAGCTCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACACTGGAGGATGCAGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTTGGCCGTGTTTTTGCAAAAGTTATTACCGAGAGTTTAGTAACTTTGAATGAGATTGGTCGATTAATACATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGAGGTTCTTGGAAGCACTTTGGAGGTAATACAATATGAGAAAGGAGACACTGTTCTAAATGAGATTCGTTCAAGCTCTAACTTGCGTTTGGAGACTTTCCGGCCACCTAATCCAATCACATCAAGGAAGTTGGAAAAATTTATTTAG 5097 0.4426 MSFNQSKSDKNDAVYRKSGRSSSFNQQRGFSGKGGGAGGAGGGGTAPSINSASSLSSNRSFNKKSNNAQGGQTRVNPSPVNSTVFNSAAASRTINNGTHVQPQLQDGPVTKSSESSAAQRSARIVSKAPTSQPPPLSSDAVPPTSPAKGDLSKAFPFQFGSIVPGFINGVAIPARTSSAPPNLDEQKRDQALHDPYRSVPSVPIPPVPKHQQPPRKDASATEQSNAGETHIGGTKAKKDSQVSALIPTSQMLKPSVPVTGISMATPYHQSQALQFGGPNSQIQSQGTSTASLHMPIPMPLPIGNATQVQQPVFVPGLQPHPMHPQGIMHQGQNMTFAHQIGHQLPHQLGNMGIGISPQYPQQQGGKFAGPRKTTPVKITHPETHEELRLDKRTDAYSDGGSSGARSHPSIPSQSQPVKSFAASHPMNYYPSSSYNSNSLYYSPSTSLPLTNSPISPNSQSPIFNYPVNHGLQNVSFMNPSSLSSLPTNKASTPSGIVEPPMLEFSHDVSNMTPSAPSVVASVTIKPSGMSAVVESNSSISGVQNGESPSSAASCDINSSVPQKGPEICSETPSQHSKSSIADSVSVVSNNEGGKESLSRSNSLKDNQKKPGKKGQPSEHQVSVQSPTVANMPSRAVDHGISDTGGSEPVGTITNCSMANTAEDLPTSDTISSSISTAVEMKTNESAEVSAKGSGAQVADRVNNHKHDKIDELAGDLKPTDLPETMSKHVKDGSENATSDSMSLSVSGIKDRPIIEPNKVKTASKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKEAVLSSESTENVSTSGSLKQLSKDAAQLDAVASEKRGHKKAEPDDWEDAADMSTPKLEVHDKSQQVSDGSGSTAKKYSRDFLLKFADQFTDLPEGFEITADITEALVIANITSPHVIERDSHHSPGRIVDRGGMSRMDRRGSAVMEEDRWSKVSSAFHSGRGLDGIGGNAGFRSGQGGNFGVLRNPRAQAPMQYAGGILSGPMQSVGNQGGIQRNSPDGERWQRAASFQQRGLIPSPTQTPLQMMHKAEKKYEVGTVTDVEETKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEENEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRLGRGLGNNQPARRNPMDFGPRGSPVLSPNPQMGGVRGLPNQARGYGPQDARFEERQSYEARTLSVTLPQRPVGDDSITLGPQGGLARGMSIRGSTAISNLPNSDVTSGLNGYSNLSERTSSNSREDLAARYGTDKFSGPSAYDQSSALERNINYGNRDLRNADRNHDRLVATSPPGQLQGSIVSQNASTEKVFPEEGLRDMSLSAIREYYSARDENELALCVKDLNSPSFHPSMVSLWVTDSFERKDAERDLLAKLLVNLVRSQDGTLSQAQLIKGFESVLSTLEDAVNDAPRAAEFLGRVFAKVITESLVTLNEIGRLIHDGGEEPGSLLEVGLAAEVLGSTLEVIQYEKGDTVLNEIRSSSNLRLETFRPPNPITSRKLEKFI* 1699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0445 1698 MobiDBLite consensus disorder prediction 195 242 - -
Apr10g0445 1698 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 120 1688 - -
Apr10g0445 1698 SMART if4_15 1061 1283 IPR003890 GO:0003723|GO:0005515
Apr10g0445 1698 MobiDBLite consensus disorder prediction 1288 1307 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 539 600 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 357 419 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 617 631 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 601 615 - -
Apr10g0445 1698 ProSiteProfiles MI domain profile. 1510 1634 IPR003891 -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 802 818 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 1153 1177 - -
Apr10g0445 1698 Gene3D - 1061 1296 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 399 419 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 1288 1340 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 1 149 - -
Apr10g0445 1698 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 120 1688 IPR045208 GO:0003743
Apr10g0445 1698 SUPERFAMILY ARM repeat 1506 1695 IPR016024 -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 377 395 - -
Apr10g0445 1698 Pfam MA3 domain 1516 1621 IPR003891 -
Apr10g0445 1698 Coils Coil 1143 1163 - -
Apr10g0445 1698 Gene3D - 1504 1698 - -
Apr10g0445 1698 Pfam MIF4G domain 1061 1283 IPR003890 GO:0003723|GO:0005515
Apr10g0445 1698 MobiDBLite consensus disorder prediction 1409 1437 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 539 653 - -
Apr10g0445 1698 SUPERFAMILY ARM repeat 1057 1285 IPR016024 -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 46 134 - -
Apr10g0445 1698 MobiDBLite consensus disorder prediction 793 819 - -
Apr10g0445 1698 SMART ma3_7 1511 1625 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0445 Apr-Chr10 11115987 11126327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0445 1 1697 Eukaryotic Initiation Factors Gene Family AT3G60240 48.222 0.0 1334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0445 K03260 - gmx:100798562 2464.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0445 10 11115987 11126327 Apr10g0445 10 11115987 11126327 ECH
Apr10g0445 10 11115987 11126327 Apr10g0061 10 1419633 1428969 PCT