Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr10g0445 | ATGTCCTTCAATCAATCAAAGTCGGACAAGAACGACGCCGTTTACCGAAAATCCGGGCGATCCTCCAGCTTCAATCAGCAGAGAGGTTTCTCAGGCAAGGGTGGTGGTGCTGGCGGCGCCGGTGGTGGCGGGACCGCGCCGTCGATCAATTCGGCTTCGTCACTCTCCTCTAACCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAAACTAGGGTAAACCCTTCCCCAGTGAATTCGACAGTGTTCAACAGTGCTGCTGCTTCCCGGACCATAAATAATGGTACCCATGTACAGCCTCAACTACAAGATGGGCCAGTTACAAAGTCATCTGAATCCTCAGCTGCACAGAGGAGTGCTAGAATTGTTTCAAAAGCTCCAACTTCTCAGCCACCCCCCTTGAGTTCTGATGCAGTTCCTCCTACAAGCCCTGCTAAGGGAGATTTGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTGTTCCTGGCTTTATTAATGGGGTGGCAATTCCTGCTCGTACAAGCTCAGCTCCTCCTAATTTAGATGAGCAGAAGCGTGATCAGGCTCTTCACGACCCTTATAGATCTGTGCCTTCAGTGCCAATTCCTCCTGTTCCAAAGCATCAGCAACCACCTAGGAAAGATGCTAGTGCCACTGAGCAATCTAATGCTGGGGAGACTCATATAGGGGGGACTAAGGCAAAAAAGGATTCTCAGGTGTCAGCTTTGATCCCAACAAGCCAGATGCTGAAGCCTTCTGTTCCTGTCACTGGGATTTCAATGGCAACGCCATATCACCAGTCGCAGGCTTTACAGTTTGGTGGTCCTAACTCACAGATTCAATCTCAGGGTACATCAACGGCATCCCTCCATATGCCTATACCAATGCCTTTACCAATTGGAAATGCTACACAAGTACAACAGCCGGTTTTTGTTCCAGGTCTTCAACCTCATCCAATGCATCCTCAAGGGATCATGCATCAGGGCCAAAACATGACTTTTGCTCATCAAATAGGTCATCAGTTGCCCCATCAATTAGGCAACATGGGCATTGGCATCAGCCCCCAATATCCCCAACAGCAAGGAGGAAAATTTGCTGGTCCTCGAAAAACTACTCCTGTGAAAATAACTCATCCTGAGACACATGAAGAGCTGAGGCTTGATAAAAGAACAGATGCATATTCGGATGGTGGGTCATCTGGTGCTAGGTCACATCCTAGCATACCTTCTCAATCCCAACCTGTTAAATCTTTTGCGGCTTCTCATCCTATGAATTATTATCCTTCCAGCTCTTATAATTCCAATTCTCTCTATTATTCACCTTCTACTTCTCTTCCATTAACAAATAGTCCAATATCTCCTAATTCACAGTCACCAATATTTAATTATCCTGTGAACCATGGTCTGCAAAATGTGAGTTTCATGAATCCATCCTCACTTAGTTCCCTGCCTACTAATAAAGCTAGCACTCCTTCTGGCATTGTTGAGCCACCCATGCTGGAATTCTCTCATGATGTGTCTAATATGACGCCATCAGCTCCATCGGTGGTTGCATCTGTGACTATTAAGCCAAGTGGTATGTCTGCTGTTGTGGAGTCCAATTCCAGTATTTCTGGTGTTCAAAATGGAGAATCCCCTAGTTCAGCAGCATCTTGTGATATCAACTCCTCTGTGCCACAAAAAGGGCCTGAAATTTGTTCAGAAACCCCTTCACAACATTCTAAGTCATCTATTGCAGATTCTGTCTCAGTTGTGTCTAATAATGAAGGAGGGAAGGAATCTCTTAGTAGGTCCAACTCCTTGAAAGATAATCAAAAGAAACCAGGGAAGAAAGGTCAACCATCGGAGCATCAGGTTTCTGTACAATCTCCGACAGTGGCTAATATGCCTTCTCGAGCTGTTGACCATGGTATATCTGATACTGGAGGTTCTGAACCTGTTGGAACTATAACAAACTGTTCTATGGCTAATACCGCTGAAGATCTTCCAACATCTGATACAATATCTAGTAGTATTTCTACTGCTGTTGAAATGAAGACCAATGAGTCTGCAGAAGTTTCTGCTAAAGGATCTGGGGCTCAAGTTGCTGACAGGGTGAACAATCATAAGCATGATAAGATAGATGAATTAGCTGGAGATCTGAAGCCTACTGATCTTCCGGAAACAATGTCAAAGCATGTAAAGGATGGCTCAGAGAATGCTACCAGTGATTCAATGTCTCTTTCTGTGTCGGGTATCAAGGACAGGCCAATTATAGAGCCAAATAAGGTGAAAACTGCATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCTGCTGGGTCAACTTCCGATCTTTATAACGCATACAAGGGACCGGAGGAAAAGAAAGAAGCTGTCTTAAGTTCAGAGAGTACAGAAAATGTTTCTACTTCTGGAAGTTTAAAGCAGTTGTCCAAAGATGCTGCTCAGTTAGATGCTGTAGCAAGTGAGAAGCGTGGTCACAAGAAAGCTGAGCCTGATGACTGGGAAGATGCTGCTGACATGTCTACACCCAAACTGGAGGTTCATGATAAATCTCAGCAGGTTAGTGATGGAAGTGGAAGTACAGCCAAAAAGTACTCTCGTGATTTCCTTTTGAAATTTGCAGATCAATTCACTGATCTTCCTGAAGGTTTTGAAATCACGGCAGACATTACCGAGGCTTTGGTGATTGCCAATATTACTAGTCCTCATGTTATTGAGCGTGATTCACATCATAGTCCTGGAAGAATTGTGGATAGAGGTGGGATGTCTAGGATGGATCGCCGTGGGAGTGCAGTAATGGAGGAAGACAGATGGAGTAAAGTTTCTAGTGCTTTTCATTCTGGACGTGGTTTGGATGGTATTGGAGGCAATGCAGGATTTCGATCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCGCAGGCACCTATGCAATATGCTGGAGGGATCCTTTCTGGGCCGATGCAATCTGTGGGAAATCAAGGTGGAATCCAGAGAAATAGCCCTGATGGGGAGAGGTGGCAGCGTGCTGCTAGCTTCCAGCAAAGGGGTTTAATTCCTTCTCCCACCCAAACTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTACTGTAACAGATGTGGAAGAGACAAAGCAGAGGCAGTTGAAAGCTATCTTGAACAAACTGACTCCTCAGAACTTTGATAGACTTTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCAGTTACCCTCACTGGTGTCATCTCACAAATATTTGAAAAGGCTCTGATGGAGCCTACCTTCTGTGAAATGTATGCCAACTTCTGTTTGCATCTGGCTTCTGAGTTACCTGATTTTAGTGAGGAAAATGAAAAGATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAGAGGGAACAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCAGTCTGATGAAGAAAGGGAGGAGAGACGAGTTAAGGCAAGAAGACGCATGTTGGGAAACATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAATGTATCAAGAAGTTACTGGGTCAATGTCAGGATCCTGACGAGGAAGACGTTGAAGCTTTGTGCAAACTAATGAGTACTATTGGGGAGATGATCGACCATCCCAAAGCCAAGGAACATATGGATGCATATTTTGAACGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAGTGGCAACAAAGGAGGAAAGTAGAAGGTCCAAAGAAGATTGAGGAGGTACACAGGGATGCTGCTCAAGAGAGGCAGGCCCAAGCTGGTAGGCTGGGTCGTGGTCTTGGCAACAATCAACCGGCAAGAAGGAATCCCATGGATTTTGGTCCAAGAGGATCACCTGTGCTGTCTCCTAATCCTCAAATGGGTGGAGTGCGTGGTCTGCCTAATCAAGCACGCGGATATGGTCCTCAGGATGCTCGATTTGAGGAAAGGCAATCTTATGAGGCTAGGACTTTGTCTGTAACTTTGCCTCAAAGACCTGTGGGTGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGGGGAATGTCTATTAGAGGATCAACAGCAATTTCTAATTTGCCTAACTCTGATGTGACCTCAGGTCTTAATGGTTACAGCAATTTATCAGAGCGCACATCATCTAACTCTAGGGAGGATCTTGCGGCAAGATATGGTACTGATAAATTTTCAGGTCCATCTGCGTATGATCAATCAAGTGCTCTGGAGCGTAATATAAACTATGGTAACAGAGACTTAAGGAATGCAGATCGGAATCATGACAGACTTGTTGCAACCTCACCTCCTGGCCAATTGCAAGGGTCAATAGTCTCCCAGAATGCTTCTACAGAGAAGGTTTTTCCAGAAGAAGGACTGAGGGACATGTCCCTGTCAGCAATCAGAGAATACTACAGTGCTAGAGATGAGAATGAACTTGCTTTATGTGTCAAAGATTTGAACTCTCCAAGCTTCCATCCTTCTATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGAAAGGATGCGGAAAGAGATCTTTTGGCCAAACTGCTTGTCAACCTTGTGAGGTCTCAGGATGGCACCTTGAGTCAAGCTCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACACTGGAGGATGCAGTTAATGATGCCCCCAGAGCAGCAGAGTTTCTTGGCCGTGTTTTTGCAAAAGTTATTACCGAGAGTTTAGTAACTTTGAATGAGATTGGTCGATTAATACATGATGGTGGAGAGGAGCCAGGTAGTCTCTTAGAAGTTGGACTTGCAGCTGAGGTTCTTGGAAGCACTTTGGAGGTAATACAATATGAGAAAGGAGACACTGTTCTAAATGAGATTCGTTCAAGCTCTAACTTGCGTTTGGAGACTTTCCGGCCACCTAATCCAATCACATCAAGGAAGTTGGAAAAATTTATTTAG | 5097 | 0.4426 | MSFNQSKSDKNDAVYRKSGRSSSFNQQRGFSGKGGGAGGAGGGGTAPSINSASSLSSNRSFNKKSNNAQGGQTRVNPSPVNSTVFNSAAASRTINNGTHVQPQLQDGPVTKSSESSAAQRSARIVSKAPTSQPPPLSSDAVPPTSPAKGDLSKAFPFQFGSIVPGFINGVAIPARTSSAPPNLDEQKRDQALHDPYRSVPSVPIPPVPKHQQPPRKDASATEQSNAGETHIGGTKAKKDSQVSALIPTSQMLKPSVPVTGISMATPYHQSQALQFGGPNSQIQSQGTSTASLHMPIPMPLPIGNATQVQQPVFVPGLQPHPMHPQGIMHQGQNMTFAHQIGHQLPHQLGNMGIGISPQYPQQQGGKFAGPRKTTPVKITHPETHEELRLDKRTDAYSDGGSSGARSHPSIPSQSQPVKSFAASHPMNYYPSSSYNSNSLYYSPSTSLPLTNSPISPNSQSPIFNYPVNHGLQNVSFMNPSSLSSLPTNKASTPSGIVEPPMLEFSHDVSNMTPSAPSVVASVTIKPSGMSAVVESNSSISGVQNGESPSSAASCDINSSVPQKGPEICSETPSQHSKSSIADSVSVVSNNEGGKESLSRSNSLKDNQKKPGKKGQPSEHQVSVQSPTVANMPSRAVDHGISDTGGSEPVGTITNCSMANTAEDLPTSDTISSSISTAVEMKTNESAEVSAKGSGAQVADRVNNHKHDKIDELAGDLKPTDLPETMSKHVKDGSENATSDSMSLSVSGIKDRPIIEPNKVKTASKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKEAVLSSESTENVSTSGSLKQLSKDAAQLDAVASEKRGHKKAEPDDWEDAADMSTPKLEVHDKSQQVSDGSGSTAKKYSRDFLLKFADQFTDLPEGFEITADITEALVIANITSPHVIERDSHHSPGRIVDRGGMSRMDRRGSAVMEEDRWSKVSSAFHSGRGLDGIGGNAGFRSGQGGNFGVLRNPRAQAPMQYAGGILSGPMQSVGNQGGIQRNSPDGERWQRAASFQQRGLIPSPTQTPLQMMHKAEKKYEVGTVTDVEETKQRQLKAILNKLTPQNFDRLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEENEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQCQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQAGRLGRGLGNNQPARRNPMDFGPRGSPVLSPNPQMGGVRGLPNQARGYGPQDARFEERQSYEARTLSVTLPQRPVGDDSITLGPQGGLARGMSIRGSTAISNLPNSDVTSGLNGYSNLSERTSSNSREDLAARYGTDKFSGPSAYDQSSALERNINYGNRDLRNADRNHDRLVATSPPGQLQGSIVSQNASTEKVFPEEGLRDMSLSAIREYYSARDENELALCVKDLNSPSFHPSMVSLWVTDSFERKDAERDLLAKLLVNLVRSQDGTLSQAQLIKGFESVLSTLEDAVNDAPRAAEFLGRVFAKVITESLVTLNEIGRLIHDGGEEPGSLLEVGLAAEVLGSTLEVIQYEKGDTVLNEIRSSSNLRLETFRPPNPITSRKLEKFI* | 1699 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 195 | 242 | - | - | |
Apr10g0445 | 1698 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE | 120 | 1688 | - | - | |
Apr10g0445 | 1698 | SMART | if4_15 | 1061 | 1283 | IPR003890 | GO:0003723|GO:0005515 | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 1288 | 1307 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 539 | 600 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 357 | 419 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 617 | 631 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 601 | 615 | - | - | |
Apr10g0445 | 1698 | ProSiteProfiles | MI domain profile. | 1510 | 1634 | IPR003891 | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 802 | 818 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 1153 | 1177 | - | - | |
Apr10g0445 | 1698 | Gene3D | - | 1061 | 1296 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 399 | 419 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 1288 | 1340 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 1 | 149 | - | - | |
Apr10g0445 | 1698 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 120 | 1688 | IPR045208 | GO:0003743 | |
Apr10g0445 | 1698 | SUPERFAMILY | ARM repeat | 1506 | 1695 | IPR016024 | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 377 | 395 | - | - | |
Apr10g0445 | 1698 | Pfam | MA3 domain | 1516 | 1621 | IPR003891 | - | |
Apr10g0445 | 1698 | Coils | Coil | 1143 | 1163 | - | - | |
Apr10g0445 | 1698 | Gene3D | - | 1504 | 1698 | - | - | |
Apr10g0445 | 1698 | Pfam | MIF4G domain | 1061 | 1283 | IPR003890 | GO:0003723|GO:0005515 | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 1409 | 1437 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 539 | 653 | - | - | |
Apr10g0445 | 1698 | SUPERFAMILY | ARM repeat | 1057 | 1285 | IPR016024 | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 46 | 134 | - | - | |
Apr10g0445 | 1698 | MobiDBLite | consensus disorder prediction | 793 | 819 | - | - | |
Apr10g0445 | 1698 | SMART | ma3_7 | 1511 | 1625 | IPR003891 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr10g0445 | Apr-Chr10 | 11115987 | 11126327 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr10g0445 | 1 | 1697 | Eukaryotic Initiation Factors Gene Family | AT3G60240 | 48.222 | 0.0 | 1334 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr10g0445 | K03260 | - | gmx:100798562 | 2464.88 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr10g0445 | 10 | 11115987 | 11126327 | Apr10g0445 | 10 | 11115987 | 11126327 | ECH | |
Apr10g0445 | 10 | 11115987 | 11126327 | Apr10g0061 | 10 | 1419633 | 1428969 | PCT |