Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0444 ATGCCCTCAGATTTTGATGAACTAGAACCACTTCATGCAAATGATCCACAAGCCAATAATCACTATGAAGGGTCACAAAAAGTAAAGGCCAAAAAGCACCCTCATGGGGCATGTGGAGGCCAAGTTGTTACATTCCTTCATGGTTCTTTTACTAGGTTGTGTGACACAAAGTGGTGGAACATGAACCTATGCCAACATGGGGCAAGGAAAACCAAGCGCATCAAGAACAACTCTTGTGTGTTTCATGACATGGAGGGTGTGCAACTCTCTACAAAGATTGGAAGGGACAGCAACAACCCAAGAATTTTCAGCTATGCTGAGCTTTACATAGGATCAAGGGGTTTCTCTGATGAAGAAGTTCTAGGAAGTGGAGGGTTTGGCAAAGTGTACAAGGCTGTTATGCCTAGTGATGGAACAGTGGTTGCTGTGAAGTGTTGCTTAGCAGGGAAAGGACACAAATTTGAGAAGACTTTTGCCGCAGAATTAGCTGCAGTGGCTCATCTTCGCCACAAGAACCTTGTTCCTTTAAGGGGTTGGTGTGTTTTTGAGGATCAACTCTACCTTGTGTATGATTACATGCCTAATAGTAGTCTTGACAAGGTACTATTTCGTAGGCCTGAGAAGAACTTGAAGGAAGAGACTCTTGGTTGGTTGAGGCGTGTGAAGATTGTGAAAGGTTTGGCAGCTGCATTACACTATTTGCATGAACAGTTGGAGACTCAAATCATTCATAGGGATGTGAAAGCCAGCAATGTCATGCTTGATTCCCATTATAATGCTAGGTTGGGTGATTTTGGATTGGCAAGGTGGCTAGAGCATGAGCTTGAGTATGAAGCAAGGAAGGCCTCAACAAAGTTTGACCATTTCAGGATGAGTGAGACAACAAGGATTGGTGGCACAATTGGGTACTTGCCCCCTGAAAGTTTTCAGAGAAGAAGCATAGCTACCTCAAAATCTGATGTTTTTAGCTTTGGGATTGTGGTGTTGGAGGTGGTGTCTGGAAGGAGAGCTATTGATCTTACATACCCAGATGACCAAATCATCTTGCTTGATTGGGTTAGAAGGCTTAGTGATGAAAGGAAGCTAGTTGATGCTAGGGATGCAAGGCTAATGGATGGTTCCAACAAGGTTTTTGAGATGGAGCACCTGATTCACATAAGCCTCTTGTGCACACTCCATGACCCACAATTTAGACCAAGCATGAAGTGGATTGTGGAAGCACTTTCTGACATGTCAAACAAATTGCCAACACTCCCTTCATTTCACTCCCATCCTATGTATGTCTCTTTGTCTTCATCATCAGAAACTAGTCCAAGCAGCACAAAAGGCACAGGCTCAAGTTCAGGCTCAGGATCAGCAACAGAGAATGCTAGCATTAGCAATCATACTTGTTTAAATTCCAAGTATGTCACAGCCACAGGAGACACTGTTTATGTAACTGCTGAAGTTGAACCAAGAAGCAGTGGAATGAGCTCTTCTAAGAGTAGAAAGATCATGCATAGGCAACCATCATTTCCTGTGGTTGAAACTCCTAGGGAGATACCATACAAGGATATTGTTTCAGCGACTGACAATTTCTCTGACTCAAAAAGGGTGGCAGAGCTAGACTTCGGAACTGCCTACCATGGCATCCTTGATGGACACTATCATGTCATGGTGAAACGCCTTGGCTTGAAAACATGCCCTGCATTGCGCCAAAGATTCTCCAATGAACTAAAGAACTTGGCAAGACTTCACCACAGGAATTTGGTGCAGCTTAGAGGGTGGTGCACTGAGCATGGAGAGATGCTTGTGGTTTATGATTACTACTCAGCTAGAAGAATTCTGAGTCACCAACTTCACCATCATAACAATGGTAGAAATGGTTGTAATTCTGTCCTCAAATGGCATCACAGATATAACATAGTGAAATCACTTGCATCTGCACTTCTCTATCTGCATGAAGAATGGGATGAACAAGTCATTCACAGGAACATAACCTGTTCAGCTATCATTCTTGAACATGACATGAATCCAAGACTAGGTAGCTTTGCTCTGGCTGAATTCTTGTCAAGGAATGAGCATGGCCATCATGTAATCACTGATAGGAGAAAATCGGTTCGTGGGATTTTTGGCTACATGTCACCGGAATATGTGGAATCCGGCGAGGCAACCGCTGCTGCTGATGTTTATAGTTTTGGTGTGGTAGTGCTTGAAGTTGTAACTGGACATATGGCTGTGGATTTTAGGCAACCAGAGGTGCTGTTGGTAAAGAAGGTTCATGAATTTGAGATGAGAAAAAGACCACTTGAGGCATTAGCTGATATAGGACTAAATGGTGGGTATAATTACAAAGAACTAATGAGATTGGTAAAGTTAGGAGTTGCATGCACCCGTTCTGACCCGACATTAAGACCAAGCACTAGACAAATTGTAAGCATTCTTGATGGCAATGACAAATTAATCATGGAGGAGAGCATGGAGAGCATGGAAGAATGGAGACTAAGAAATGCTTGTTCTTTGTCACTGGTTAAGAGAATCCAAGCTCTAGGAATACAATGA 2541 0.4305 MPSDFDELEPLHANDPQANNHYEGSQKVKAKKHPHGACGGQVVTFLHGSFTRLCDTKWWNMNLCQHGARKTKRIKNNSCVFHDMEGVQLSTKIGRDSNNPRIFSYAELYIGSRGFSDEEVLGSGGFGKVYKAVMPSDGTVVAVKCCLAGKGHKFEKTFAAELAAVAHLRHKNLVPLRGWCVFEDQLYLVYDYMPNSSLDKVLFRRPEKNLKEETLGWLRRVKIVKGLAAALHYLHEQLETQIIHRDVKASNVMLDSHYNARLGDFGLARWLEHELEYEARKASTKFDHFRMSETTRIGGTIGYLPPESFQRRSIATSKSDVFSFGIVVLEVVSGRRAIDLTYPDDQIILLDWVRRLSDERKLVDARDARLMDGSNKVFEMEHLIHISLLCTLHDPQFRPSMKWIVEALSDMSNKLPTLPSFHSHPMYVSLSSSSETSPSSTKGTGSSSGSGSATENASISNHTCLNSKYVTATGDTVYVTAEVEPRSSGMSSSKSRKIMHRQPSFPVVETPREIPYKDIVSATDNFSDSKRVAELDFGTAYHGILDGHYHVMVKRLGLKTCPALRQRFSNELKNLARLHHRNLVQLRGWCTEHGEMLVVYDYYSARRILSHQLHHHNNGRNGCNSVLKWHHRYNIVKSLASALLYLHEEWDEQVIHRNITCSAIILEHDMNPRLGSFALAEFLSRNEHGHHVITDRRKSVRGIFGYMSPEYVESGEATAAADVYSFGVVVLEVVTGHMAVDFRQPEVLLVKKVHEFEMRKRPLEALADIGLNGGYNYKELMRLVKLGVACTRSDPTLRPSTRQIVSILDGNDKLIMEESMESMEEWRLRNACSLSLVKRIQALGIQ* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0444 846 Pfam Protein kinase domain 116 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0444 846 SUPERFAMILY Protein kinase-like (PK-like) 504 810 IPR011009 -
Apr10g0444 846 SUPERFAMILY Protein kinase-like (PK-like) 98 438 IPR011009 -
Apr10g0444 846 Gene3D Transferase(Phosphotransferase) domain 1 608 831 - -
Apr10g0444 846 Gene3D Transferase(Phosphotransferase) domain 1 193 419 - -
Apr10g0444 846 ProSitePatterns Protein kinases ATP-binding region signature. 121 150 IPR017441 GO:0005524
Apr10g0444 846 Gene3D Phosphorylase Kinase; domain 1 487 602 - -
Apr10g0444 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Apr10g0444 846 ProSiteProfiles Protein kinase domain profile. 115 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0444 846 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 31 845 - -
Apr10g0444 846 MobiDBLite consensus disorder prediction 1 33 - -
Apr10g0444 846 MobiDBLite consensus disorder prediction 429 457 - -
Apr10g0444 846 SMART serkin_6 526 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0444 846 SMART serkin_6 115 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0444 846 ProSiteProfiles Protein kinase domain profile. 526 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0444 846 Pfam Protein tyrosine and serine/threonine kinase 532 806 IPR001245 GO:0004672|GO:0006468
Apr10g0444 846 Gene3D Phosphorylase Kinase; domain 1 87 192 - -
Apr10g0444 846 PANTHER - 31 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0444 Apr-Chr10 11081859 11084419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0444 516 814 Receptor kinase-like Gene Family AT3G53810 36.634 3.10e-50 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr10g0444 PK_Tyr_Ser-Thr 5.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0444 - - gmx:100781955 1372.07