Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0442 ATGGATGAGTCATGTTTTTATTCGGATGTAATGAACAACTTTGATTTGTTCAGTGAACATGACATGTTCTCTGATCTTGAACAAGAGTTAAAGCTGGAAAACTCAGTGGGGCCAAAACCCTTTTGGAACAATCATTCTTGTTCAAATCTCAATGAAGAAAGCACCACCCTTTATAGCAACAAGGGCAATTATTCATATTTGGAAGAGATCACAGGCTGTGATAACACAAGTCTCAAACAACATGATTCTCCTCAAAAACCTCTCTTAGCATCCTCCATGTCTTACATTCTATCTTTTGAGGATTCCACTGCAGTGCCAAATATTCCCAAGAAAACTTGCCTATACCATGGTGGTGAAAATTCAAAGGAGATCACAAAAGAAGAGCCATGCAATAGAAAATCCAAAACGGGTAGAGGCCCTTCTCAAACACAAAATCACAAAATGGCTGAGAGAAAGAGGAGAGAAAATCTCACAAAAATGTTCATGGCACTTTCAGCCATTATTCCCGGGTTGAAAAAGATGGATAAGGCTTCTATTCTTAATGATGCAATCGATTATGTGAAATATCTTAAGAAGCGTGTAAAGGATTTGGAAGATCAGAACAAAAACAAGAATAGAAAGATTGAATCCATAGTATGCTTCAAAAGCAGCAAATCCATTAACTCCGAAGATTACTTGTCTTGGACCTTTGATGGCTTAGATAAACCTAGCAAGAAATTTGTCAAAGTTGAAGCAAGAATCTTAGCAAAAGACGTATTCATCAGAGTTATGTGTGAGAAACAAAAGGACACTATACATAAACTACTGGCCAAGCTTGAAGCCCATAATCTCTCCATAGTTTATAGCAATGTTTTGCCGATTGGGAATTCCTTGCTGAACATTACTAGCATTGCTCAGATGGACCATAAGTTCAACATGAAGATGGACGATCTTGTGAAACTTTTGATTGAGGATTTCTCAGAGTGCTGTAACTTGCAACAATAA 984 0.374 MDESCFYSDVMNNFDLFSEHDMFSDLEQELKLENSVGPKPFWNNHSCSNLNEESTTLYSNKGNYSYLEEITGCDNTSLKQHDSPQKPLLASSMSYILSFEDSTAVPNIPKKTCLYHGGENSKEITKEEPCNRKSKTGRGPSQTQNHKMAERKRRENLTKMFMALSAIIPGLKKMDKASILNDAIDYVKYLKKRVKDLEDQNKNKNRKIESIVCFKSSKSINSEDYLSWTFDGLDKPSKKFVKVEARILAKDVFIRVMCEKQKDTIHKLLAKLEAHNLSIVYSNVLPIGNSLLNITSIAQMDHKFNMKMDDLVKLLIEDFSECCNLQQ* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0442 327 MobiDBLite consensus disorder prediction 124 151 - -
Apr10g0442 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
Apr10g0442 327 Coils Coil 180 207 - -
Apr10g0442 327 Gene3D - 132 207 IPR036638 GO:0046983
Apr10g0442 327 Pfam Helix-loop-helix DNA-binding domain 143 191 IPR011598 GO:0046983
Apr10g0442 327 SMART finulus 147 196 IPR011598 GO:0046983
Apr10g0442 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 209 IPR036638 GO:0046983
Apr10g0442 327 PANTHER BHLH TRANSCRIPTION FACTOR 13 325 - -
Apr10g0442 327 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 13 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0442 Apr-Chr10 11057511 11060061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0442 92 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.741 3.92e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr10g0442 HLH 7.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0442 - - aprc:113850789 663.299