Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0441 ATGGATGAGCCATGGGAAAATTTGCTATCTTATTTGGAAAAGGGTGAGTGGCATGACATAGACTCTCTCCTGGAAGAGTTCAAGGGAGAAAATTCATTATATTGGAAAAGTCAATCTTTTGATTCAAATTTCACTAGAGAAAGCATCTCCCATCACAGCAACAACATGGGCAATTCTTCATCTTTGGAAGAGAACATTGGCTTTGATAACACTACAAGTCTCAAACAACATGCTTCTTTGGAGAAACCTCTCTTATCTTCCTCAGAGTCCTATGTTCTCTCTTTTGAGGACTCCACTATTGTGCCAAACTTTCCCAAGAAAACATGCCATCATCATAAACAGGAGAGCCAGGAAAAACATGACAACAGAAAACTCAAGAGGTGTAGAAGCTTGTCTCAGACTCAACATCATATATTGGCTGAGAGAAAGAGGAGAGAGAATCTCACCAGAATGTTCATCGCACTTTCAGCCATTATTCCAGGGTTGAAAAAGATTGACAAGGCTTCTATCCTCAACTACACTATCGATTATGTAAAGTATCTTGAAAAGCGTGTGAAAGACTTGGAAGAAGAAAACAAGAAGAAAACTGAATCCGTAATATGCTTCAAAATGAAAAAATCCAATGTTAGTGCTGCCCCTGATGGCTTAGATAGACCAATTAAGATATGTCCCAAAGTTGAAACAAGAGTATCAGCAAAAGATGTACTCATCAGAGTTATGTGTGAGAAACGAAAGGACATTGTACCTAAGCTACTGGCCATGCTTGAAACCTATAGTCTCTCCATAGTTTGTACCACTGTTTTGCCGTTTGGGAATTCTACTTTGAACATTACCAGCATCGCTCAGATGGACCAAAATTTCAATACAAATATAGACAACATAGTGAAAGTTTTGACCGAGGATTTGTTGAAGTGTTGTAACTTGCAACGAGTTTGA 936 0.3857 MDEPWENLLSYLEKGEWHDIDSLLEEFKGENSLYWKSQSFDSNFTRESISHHSNNMGNSSSLEENIGFDNTTSLKQHASLEKPLLSSSESYVLSFEDSTIVPNFPKKTCHHHKQESQEKHDNRKLKRCRSLSQTQHHILAERKRRENLTRMFIALSAIIPGLKKIDKASILNYTIDYVKYLEKRVKDLEEENKKKTESVICFKMKKSNVSAAPDGLDRPIKICPKVETRVSAKDVLIRVMCEKRKDIVPKLLAMLETYSLSIVCTTVLPFGNSTLNITSIAQMDQNFNTNIDNIVKVLTEDLLKCCNLQRV* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0441 311 MobiDBLite consensus disorder prediction 106 128 - -
Apr10g0441 311 PANTHER BHLH TRANSCRIPTION FACTOR 5 308 - -
Apr10g0441 311 Gene3D - 126 197 IPR036638 GO:0046983
Apr10g0441 311 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 181 IPR011598 GO:0046983
Apr10g0441 311 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 308 - -
Apr10g0441 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 197 IPR036638 GO:0046983
Apr10g0441 311 Coils Coil 178 198 - -
Apr10g0441 311 MobiDBLite consensus disorder prediction 108 128 - -
Apr10g0441 311 Pfam Helix-loop-helix DNA-binding domain 135 182 IPR011598 GO:0046983
Apr10g0441 311 SMART finulus 138 187 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0441 Apr-Chr10 11036853 11039074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0441 88 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.115 1.25e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr10g0441 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0441 - - aprc:113850789 318.161