Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0439 ATGAAGTGCTTTTACTACTTCAAAGACAAATCGAGGAGCCCAAAGCAAAGGTCAGCACCTGAACTGAAAGAGCAAGATGAACTTCAGTTTTCAGGGCCTGAAAGGGTCACCAAGTCGTCATGCTCGTCTCTGTCGCCTCGAGGTATACCGGAACTGTATGAGGAGAAGGGTCACAATTTGAGGGCCTTCTCCATTACTGAGCTCAAACGTGCAACAAGTGATTTCAGCAGGGTTTTGAAGATAGGAGAAGGTGGATTTGGAAGTGTTTATAAAGGTTCAATCAAGCCTGTTGATGGAAATGGTGCTCCTGTTTTAGTTGCCATCAAAAGGCTTAACAAGGATGCATTGCAGGGCCACAAGCAATGGTTGACTGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCCAAATCTTGTCAAGCTTATTGGATACTGTGCTTTGGATGGTGAAAGAGGGATCCAGAGACTACTTGTGTATGAATACATGCCAAACAAAAGCTTAGAATTTCATCTTTTCAATAAAGCCTATGATCCGCTTCCTTGGAAAACAAGACTTGAAATAGCACTTGGAGCAGCTCAGGGGTTATCCTATCTTCATGAAGAATTAGAAGTTCAGGTGATATATCGAGATTTTAAATCGTCCAATGTATTGCTGGATGAAGATTTTAAGCCAAAGCTTTCTGATTTTGGACTTGCTAGGGAGGGACCAGTTGCTGGGGATACTCATGTTTCAACTGCGGTGATGGGAACACATGGTTATGCTGCTCCAGATTACATTGAGACAGGCCATCTCACTGCCAAGAGTGATGTGTGGAGTTTTGGTGTGGTGCTATATGAAATGCTTACTGGCAGGCGTTCCATGGAAAGAAACAGGCCGAAAACGGAGCAGAAACTATTGGAGTGGGTGAAGCACTATCCTCCTGATAGCAAAAAGTTTGATACTATTATGGATCCGCGCCTTAAAGGACAATACTCCATTAATGGATCACGAAAAATTGCCAAACTCGCCGATCATTGCCTGCGTAAGAGTGCAAAAGACCGGCCAACAATGAGTCAGGTGGTAGAGATATTGAAGCAGATAATCATCCAAGATTCTAATGAAGAACACCCTGCAGATAATAAGAGTATTGAGGAATCTGAAAGTGATCCAGTTGAGGCTGAAGAAGAGCCAAAACAACCAGGCTCTTCAGAGTTATGGAAAAAAAGGATGGAGCATCTTGCAAAACTTGGTGAACATGTTGAGAGTGCTAGTAGAAGAAGATTTATGATCCTTCAGAAAGCCAATGTTTCTTCATAG 1293 0.4292 MKCFYYFKDKSRSPKQRSAPELKEQDELQFSGPERVTKSSCSSLSPRGIPELYEEKGHNLRAFSITELKRATSDFSRVLKIGEGGFGSVYKGSIKPVDGNGAPVLVAIKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCALDGERGIQRLLVYEYMPNKSLEFHLFNKAYDPLPWKTRLEIALGAAQGLSYLHEELEVQVIYRDFKSSNVLLDEDFKPKLSDFGLAREGPVAGDTHVSTAVMGTHGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSMERNRPKTEQKLLEWVKHYPPDSKKFDTIMDPRLKGQYSINGSRKIAKLADHCLRKSAKDRPTMSQVVEILKQIIIQDSNEEHPADNKSIEESESDPVEAEEEPKQPGSSELWKKRMEHLAKLGEHVESASRRRFMILQKANVSS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0439 430 MobiDBLite consensus disorder prediction 363 399 - -
Apr10g0439 430 MobiDBLite consensus disorder prediction 32 46 - -
Apr10g0439 430 MobiDBLite consensus disorder prediction 364 399 - -
Apr10g0439 430 CDD STKc_IRAK 81 359 - -
Apr10g0439 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Apr10g0439 430 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Apr10g0439 430 SUPERFAMILY Protein kinase-like (PK-like) 59 369 IPR011009 -
Apr10g0439 430 Gene3D Transferase(Phosphotransferase) domain 1 161 383 - -
Apr10g0439 430 Pfam Protein kinase domain 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0439 430 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0439 430 MobiDBLite consensus disorder prediction 1 46 - -
Apr10g0439 430 MobiDBLite consensus disorder prediction 1 31 - -
Apr10g0439 430 PANTHER OS07G0495150 PROTEIN 25 418 - -
Apr10g0439 430 PANTHER OS01G0588500 PROTEIN-RELATED 25 418 - -
Apr10g0439 430 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0439 Apr-Chr10 10997040 11001882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0439 1 398 Glycoside Hydrolase AT3G07070 40.714 8.18e-94 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr10g0439 Pkinase 9.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0439 - - gmx:100784625 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0439 10 10997040 11001882 Apr10g0439 10 10997040 11001882 ECH