Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0437 ATGTTCCGCCGCGCAACCGCTACCCTCCTCGCCGGTGCCACTCGCCGCCACCGCTTCTCGACGGATGTGCCGGCTGCAGCGGCCGTAGATTCAAGCTTCGTGGAGGCGTGGAAGAAAGTGAGCCCAAACCTTGACCCACCGAAGACACCTTTGGCTTACATGAAACCTCGTCCTCCCACACCTTCCACACTCCCTTCCAAACTCACCGTTAACTTCGTTCTCCCCTATGCTTCTCAATTATCCGCCAAAGAGGTTGACATGGTCATAGTACCGGCAACAACTGGGCAGATGGGTGTTCTCCCTGGACATGTAGCAACAATTGCAGAGTTGAAACCTGGTGTTCTATCTGTACATGACGGTAATGATGTCAGCAAGTATTTTGTCAGCAGTGGCTTCGCATTCATCCATGCAAACTCCGTCGCTGATATAATAGCTGTTGAGGCTGTGCCGGTGGATCAAATTGATGCGAACCTTGTCCAGAAGGGTCTTCAAGATTTCACTCAGAAGCTGAACTCGGCCACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGGGTTGATGTCCATAGTGCTCTGAACTCTGCCCTCACAGGCTAA 597 0.5193 MFRRATATLLAGATRRHRFSTDVPAAAAVDSSFVEAWKKVSPNLDPPKTPLAYMKPRPPTPSTLPSKLTVNFVLPYASQLSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHDGNDVSKYFVSSGFAFIHANSVADIIAVEAVPVDQIDANLVQKGLQDFTQKLNSATTDLEKAEAQIGVDVHSALNSALTG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0437 198 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 68 140 IPR020546 GO:0015986
Apr10g0437 198 Hamap ATP synthase epsilon chain [atpC]. 66 186 IPR001469 GO:0015986|GO:0045261|GO:0046933
Apr10g0437 198 Gene3D - 58 154 IPR036771 -
Apr10g0437 198 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 198 IPR001469 GO:0015986|GO:0045261|GO:0046933
Apr10g0437 198 CDD F1-ATPase_delta 68 191 IPR001469 GO:0015986|GO:0045261|GO:0046933
Apr10g0437 198 Gene3D - 155 197 - -
Apr10g0437 198 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 73 183 IPR001469 GO:0015986|GO:0045261|GO:0046933
Apr10g0437 198 Coils Coil 163 183 - -
Apr10g0437 198 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 68 149 IPR036771 -
Apr10g0437 198 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 198 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0437 1 198 Primary Pumps ATPases AT5G47030 69.268 4.38e-103 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0437 K02134 - gmx:100780778 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0437 10 10976321 10980728 Apr10g0437 10 10976321 10980728 ECH