Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0406 ATGGTAGTGAAAGGTGAGCTTGTATCTAAGGACACAATAAAGCCATCTTCTCCAACCCCTGATCATCTTAGAAACTTCAAAATCTCCCTCCTTGATCAACTGGCCCCTCCATCATTTTATGTCCCCATTCTCTTGTTTTACTCTGCCCCTGATGTCACTGCTTTTGGCATTAATTTCAAAACCATATCTAATAAGTTAAAAGCATCTCTATCTACCATCCTCACACTCTATTACCCATTTTGTGGAAGACTCAAAGGTAACTCGTCTGTTGAGTGCAATGATGAGGGTGTTCTATTCGTTGAGTATAAATTTTCCACTGAACTCTCAAACATTTTGAAATCCCCTCAACTTCATGAGATCAATGAACTTTTCCCTTTTGATCCTTACAACCCTCCAGCAGAACACAATGAAAACATGGCAATTCAATTGAACGAATTCAGGTGTGGGGGTATAGCACTTGGCGTGTGCTTCTCACACAAGATTGCTGATGGTTCCACAGCAGCATCATTCCTCAATGCTTGGGCTTCAACATCGAAAGGACAAGGCAATAACATTGTGGCACCAGCTCAACTGGAGGAAGCAACCCAGCTTTTCCCACCAAGGAACATAGAGATGGACATGACACGTGGCCTGGTTGGCCACAAAAACCTCGTCACAAAGAGGTTGGTATTTTATGAGAGTGACATATCTAGACTAAAACAAAAACTGGGGTGCTTCAATTTCAATCCCACACGTGTTGAAGCTGTGACAGCACTCATTTGGAAATCATCATTGGAAGCAGCAAAAGCAACTTCAGGGGAACAAAAATGTCCAGCATCTATTATGGTCCACGCGGTGAACATTCGTAGTAGAATGGCCCCAACTTTGTCGAAGCATTCAATTGGAAATCTCTGGCAACCAGCAGTGTCTTCGCTGGTGGAAGTGAGTGGCGAAATAAGGTTGCACGATTTGGCAGAGATAGTGAGAAAAACTATAAGAAAAGTTGACGGAGACTATATAAGTAAACTTCAAGGAGCTGAATTTTTTAAGGTAATTAACTCTTTAGAATCATGGGTAATGGCTGCGGAAAAGGGTATTCCATGTCATGGCTTTAGCAGTTGGATAAAATTTGAGTTTTATGAAGCTGATTTTGGATGGGGCAAGCCAACTTATGTGCGCACAATTGGTGTGCCTATAAAAAATGTCGTAATTTTGATGGCCACAAAGGATGGGGATGGCATAGAGGCATGGGTAACCTTGACTACTCGTGACATGCTCGAATTTGAGCGTAACCCACAACTTCTTGAGTTTTCGTCATTGGATTTTAATTAA 1311 0.4188 MVVKGELVSKDTIKPSSPTPDHLRNFKISLLDQLAPPSFYVPILLFYSAPDVTAFGINFKTISNKLKASLSTILTLYYPFCGRLKGNSSVECNDEGVLFVEYKFSTELSNILKSPQLHEINELFPFDPYNPPAEHNENMAIQLNEFRCGGIALGVCFSHKIADGSTAASFLNAWASTSKGQGNNIVAPAQLEEATQLFPPRNIEMDMTRGLVGHKNLVTKRLVFYESDISRLKQKLGCFNFNPTRVEAVTALIWKSSLEAAKATSGEQKCPASIMVHAVNIRSRMAPTLSKHSIGNLWQPAVSSLVEVSGEIRLHDLAEIVRKTIRKVDGDYISKLQGAEFFKVINSLESWVMAAEKGIPCHGFSSWIKFEFYEADFGWGKPTYVRTIGVPIKNVVILMATKDGDGIEAWVTLTTRDMLEFERNPQLLEFSSLDFN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0406 436 Gene3D - 214 429 IPR023213 -
Apr10g0406 436 Pfam Transferase family 6 426 - -
Apr10g0406 436 Gene3D - 3 207 IPR023213 -
Apr10g0406 436 PANTHER N-BENZOYLTRANSFERASE PROTEIN, PUTATIVE-RELATED 3 433 - -
Apr10g0406 436 PANTHER F21J9.9 3 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0406 Apr-Chr10 10026670 10027980 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0406 13 423 Monolignol Biosynthesis Gene Families AT5G48930 23.356 3.21e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0406 - K13065 gmx:100792323 628.246