Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0392 ATGTCTCTTCCAAGACCCTCTGAGGGTGAAGCCTCTTCTCAGCTGAAAGAAGGAGGAGCAACAGCCTCCTCCTCTTCTTCATGGAATAAGCTAAACACTTTCCCTCGTTCAACGATACACAACAAGAGAAGCAAAAATGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTGGAAGCCACACCAATTAGTGTTCATTCTGCAGTAACTCTTACAAATAGTAACCTTAATCAAAATAATGTGACAGACCCTCAATTTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGACAAGGAGCATAGACGCCTCAAGAGGTTATTGAGGAACAGGGTCTCTGCTCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGCAAGAAAAAAACGCTATCTTAGAAGAACGCATCTCAACTTTGATCAATGAGAACACTATGCTGCGGAAGGTTCTTATGAACGCGAGGCCAAAAGCTGATGATAGCATTGAACTAAAGCAAGACTAG 546 0.4341 MSLPRPSEGEASSQLKEGGATASSSSSWNKLNTFPRSTIHNKRSKNEDSDEDMFTVPDVEATPISVHSAVTLTNSNLNQNNVTDPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELQEKNAILEERISTLINENTMLRKVLMNARPKADDSIELKQD* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0392 181 MobiDBLite consensus disorder prediction 1 52 - -
Apr10g0392 181 CDD bZIP_HY5-like 117 158 - -
Apr10g0392 181 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 20 180 IPR044280 GO:0000981|GO:0045944
Apr10g0392 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 168 IPR004827 GO:0003700|GO:0006355
Apr10g0392 181 SUPERFAMILY Leucine zipper domain 107 166 IPR046347 GO:0003700|GO:0006355
Apr10g0392 181 MobiDBLite consensus disorder prediction 75 104 - -
Apr10g0392 181 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
Apr10g0392 181 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 20 180 - -
Apr10g0392 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 110 125 IPR004827 GO:0003700|GO:0006355
Apr10g0392 181 Coils Coil 123 157 - -
Apr10g0392 181 Pfam bZIP transcription factor 104 163 IPR004827 GO:0003700|GO:0006355
Apr10g0392 181 MobiDBLite consensus disorder prediction 1 39 - -
Apr10g0392 181 Gene3D Single helix bin 126 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0392 Apr-Chr10 9689940 9692706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0392 86 174 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 76.667 4.35e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr10g0392 bZIP_1 7.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0392 K16241 - gmx:100783826 309.686