Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0391 ATGGACTTGAGGGATGCATTGGCTGGTTTCTTTCTGTTTTGTAGCTTCTGGCTTGTCACATTCTGTGAACAAGATGGTTTCTTGAGTCTTTCTTGTGGTGGAAGAACCACTTTTAGGGATTTATCTAACATTTCATGGGTCCCAGACACCACCTACACAACCACAGGCAAGACTACCACGATCACTTACGGTGATGGTTCCTCCTTATCGAGCATCTCGGCTCGGTTTTTTCCAAATTCCAGGAGGCGAAAATGTTACAGAATACCAGTGAACAATGCAACAAATTTGGTTCTAGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGAGAAACCCCCCAAGTTTTCTGTTTCTATTGGAACAGCTACATCTGCTACCATAAATCTTGCTGAAAATGATCCATGGAGTGAAGAGTTTCTATGGAATGTCAATAAAGATACACTTCCATTCTGTTTAAATGCTATTCCACATGGTGGTTCACCTGTAATTTCTTCCCTTGAAATCAGACCACTTCCTCAAGGAGCCTACACAACTGGCATGGCAGATTTTCCTAATAAGTTGCTAAGGAAGAGTTATAGAATTGATTGTGGACACATCAATGATTCTATAAGGTATCCCCTGGATCCATTTGATAGAATATGGGATGCTGATAGAAGTTTCACACCCTTTCATGTTGCAACTGGGTTTAAGATTCAACTTAGCTTCAATCAGTCTAGTCTTGTGGAAGAACCACCAGCAGTTGTTCTTCAAACTGGGAGAGTTTTGGCTAGAAGAAATATGCTGACATACAACCTCCCTCTTGACACATTTGGAGACTATTACGTCATTCTATACTTTGCTGGAATTCTTCCTGTTTTCCCCTCATTTGATGTGTTCATAAATGGAGAGCTAGTGAAATCAAACTACACAATAAATAGTTCAGAAACAAGTGCTTTATACATAACGCGAAAGGGAATTAGTAGCTTGAATATAACACTAAAGAGTATCAGCTTTTACCCTCAGATCAATGCATTTGAGGTTTATAATATGGTTGATATCCCATCTGATGCCTCCTCAACTACAGTTTCAGCACTGCAGGTTATTCAGCAATCCACTGGATTGGATCTTGGATGGCAAGATGATCCATGCTTTCCATCACCATGGGATAAAATTGATTGTGAAGGAAGCCTCGTTACATCATTGGATCTTTCGGACATAAATTTGAGATCAATTAGTCCTACATTTAGTGACTTGTTAGACCTTAAAACATTGGATTTGCACAACACATCGCTTGCTGGTGAAATACAGAATTTGGATAGCTTGCAACATCTTGAGAAATTGAACCTAAGTTTCAATGAATTAACATCCTTTGGTGTTGATCTGGAGAACTTGATTAGCCTTCAAATATTAGAGTTGCAGAACAATAGTCTAATGGGAGTGGTGCCTGATAGCTTGGGAGAGTTAGAAGACCTGCACTTACTGAATCTGGAAAACAACAAACTAGAAGGTCCACTACCACAATCTTTGAACAAAGAAACTTTAGAGATCAGAGCGCAGTTATTGCAGAAGATACTAGTCCATCTTATTTTATGGACAACTGGTAATTTGTGCCTTACATTTTCCACAACCACATGTGATGATGCATCATCTAATCCTCCAATTGAGGCACCCCAAGTCACCATAGTTCCTAAGAAGAAACACAATGTACATAACCATCTAGCAATCATACTAGGCATGGTTGGAGGAGTCACACTAGCATTTCTTTTAATGTGTCTTTTAGTATTATTGATATACAAGACTAAACAATATGAGGTCTCCCACACAGAAAGAGCAGAAATGGACATGAGGAATTGGGGTGCTGCAAAACTCTTTTCCTACAAAGAAATCAAAGTAGCTACAAGAAATTTCAAAGAAATTATAGGACGGGGCAGTTTTGGATCTGTTTATCTTGGAAAACTTCCAGATGGAAAATCTGTAGCTGTCAAAGTTCGGTTTGACAAATCTCAACTTGGTGCTGATTCTTTTATCAATGAGGTTAATCTTTTGTCAAAAATCCGGCATCAAAATCTTGTATCCTTGGAAGGATTTTGTCATGAACGAAAGCATCAAATATTAGTTTATGAGTACTTGCCTGGTGGATCCCTGGCTGATCACCTCTATGGTACAAACAGTCAAAAAACTTCCTTAAGTTGGGTTCGAAGGTTGAAAATTGCTGTTGATGCTGCAAAAGGGTTGGATTATTTACACAATGGAAGTGAACCACGAATCATACACCGTGATATAAAGTGCAGTAACATCCTCTTGGATATGGATATGAATGCCAAGGTCTGTGACTTAGGTCTCTCTAAGCAAGTAACTCAGGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGTTACCTTGATCCAGAGTATTATTCCACTCAACAGCTGACAGAGAAGAGTGATGTATATAGCTTTGGGGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAACTCCTGACTCATTCAATTTGGTGTTATGGGCCAAGCCCTACTTGCAAGCAGGTGCATTTGAGATTGTGGATGAGGAAATAAGAGGAGCTTTTGATCCCTTAAGCATGAGAAAGGCAACTTTCATTGCTGTGAAGTCAGTGGAGAGGGATGCATCACAGAGGCCATCAATTGCAGAGGTATTAGCTGAGTTAAAGGAAGCATATAGCATTCAGCTCAGATTCCTTGAATCTTGTCAAAATGAGAATTGA 2757 0.3964 MDLRDALAGFFLFCSFWLVTFCEQDGFLSLSCGGRTTFRDLSNISWVPDTTYTTTGKTTTITYGDGSSLSSISARFFPNSRRRKCYRIPVNNATNLVLVRAKFVYKNYDGLEKPPKFSVSIGTATSATINLAENDPWSEEFLWNVNKDTLPFCLNAIPHGGSPVISSLEIRPLPQGAYTTGMADFPNKLLRKSYRIDCGHINDSIRYPLDPFDRIWDADRSFTPFHVATGFKIQLSFNQSSLVEEPPAVVLQTGRVLARRNMLTYNLPLDTFGDYYVILYFAGILPVFPSFDVFINGELVKSNYTINSSETSALYITRKGISSLNITLKSISFYPQINAFEVYNMVDIPSDASSTTVSALQVIQQSTGLDLGWQDDPCFPSPWDKIDCEGSLVTSLDLSDINLRSISPTFSDLLDLKTLDLHNTSLAGEIQNLDSLQHLEKLNLSFNELTSFGVDLENLISLQILELQNNSLMGVVPDSLGELEDLHLLNLENNKLEGPLPQSLNKETLEIRAQLLQKILVHLILWTTGNLCLTFSTTTCDDASSNPPIEAPQVTIVPKKKHNVHNHLAIILGMVGGVTLAFLLMCLLVLLIYKTKQYEVSHTERAEMDMRNWGAAKLFSYKEIKVATRNFKEIIGRGSFGSVYLGKLPDGKSVAVKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHERKHQILVYEYLPGGSLADHLYGTNSQKTSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDIKCSNILLDMDMNAKVCDLGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWAKPYLQAGAFEIVDEEIRGAFDPLSMRKATFIAVKSVERDASQRPSIAEVLAELKEAYSIQLRFLESCQNEN* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0391 918 SMART serkin_6 629 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0391 918 Pfam Malectin-like domain 30 344 IPR024788 -
Apr10g0391 918 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Apr10g0391 918 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 913 - -
Apr10g0391 918 Gene3D - 192 347 - -
Apr10g0391 918 SUPERFAMILY Protein kinase-like (PK-like) 611 900 IPR011009 -
Apr10g0391 918 SUPERFAMILY L domain-like 358 520 - -
Apr10g0391 918 Gene3D Phosphorylase Kinase; domain 1 592 704 - -
Apr10g0391 918 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Apr10g0391 918 PANTHER OS07G0107800 PROTEIN-RELATED 10 913 - -
Apr10g0391 918 CDD STKc_IRAK 635 902 - -
Apr10g0391 918 Pfam Protein kinase domain 631 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0391 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Apr10g0391 918 ProSiteProfiles Protein kinase domain profile. 629 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr10g0391 918 Gene3D Ribonuclease Inhibitor 356 522 IPR032675 -
Apr10g0391 918 Gene3D Transferase(Phosphotransferase) domain 1 705 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0391 Apr-Chr10 9678657 9687197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0391 10 913 Receptor kinase-like Gene Family AT5G48740 62.168 0.0 1098
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr10g0391 Malectin_like 4.3e-52 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0391 - - aprc:113850446 1793.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0391 10 9678657 9687197 Apr10g0391 10 9678657 9687197 ECH