Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0388 ATGGCCACCCCGTCTTCACCCCAAAACGACGCCGCATCGCCCTCAAAGAAGCCCCAACCCATACCATGGACCCACCAAGAAACCGTTCACCTCATCCGAGCCTACCAAGAGAAGTGGTACTCTCTCAAACGCGGCCCTCTCCGTCAAAACCAGTGGGAAGAAGTCGCCGTCGTTGTCGCCGCCCGCTGCGGCTACGACCTCAACCACCCCTCCAAGTCCGCCCTCCAGTGCCGCCATAAAATGGAAAAACTCCGTCAGCGCCACCGTGCCGACAAAAAACACCGCCTCACCACCCCCACCGCCCCCGCCAGCGCGTGGCAATACTCATCCCTCATGGACGAACTCGAACGCGGCCCCCTCCCTATTTCCGCCTTAGCCCCTTCGCGAAACGACAGCGATGATGACTTCGACGACAACGACACCAATCCGCATGAAAACGATGAGAGGGAGAGAGAGAGTTATATCAAGTCGAAGAGTATTAATCATATTGTTAGCCATAGCCAGAGACCTATGAGAACCAAGGAGAGACTTGTTTATTACGATGATATCGGTGATGATGATGAAGATGACGATGATGATGATGATGATGAAGATGATGAATATGATGATGGGGGTGACGATGGTGTTTTAGGGTTGACTGCGGAGATGAGGGCTTTCGCGGAGAGGTTTATTGGGATGGAGAATTTGAAGATGGAGATGATGAAGGAAACGGAGAGGTGTAGGTTGGAGATGGAGAAGAAGCGGATTCAGATGATTCTCGAATCGCAGCGAAGGATCGTTGATTCCATTGGGAGGGTTTTCGGTTCTTCCAAGAGGATCAAGATTGGTCAACAAACCTGA 840 0.5226 MATPSSPQNDAASPSKKPQPIPWTHQETVHLIRAYQEKWYSLKRGPLRQNQWEEVAVVVAARCGYDLNHPSKSALQCRHKMEKLRQRHRADKKHRLTTPTAPASAWQYSSLMDELERGPLPISALAPSRNDSDDDFDDNDTNPHENDERERESYIKSKSINHIVSHSQRPMRTKERLVYYDDIGDDDEDDDDDDDDEDDEYDDGGDDGVLGLTAEMRAFAERFIGMENLKMEMMKETERCRLEMEKKRIQMILESQRRIVDSIGRVFGSSKRIKIGQQT* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0388 279 MobiDBLite consensus disorder prediction 1 24 - -
Apr10g0388 279 MobiDBLite consensus disorder prediction 182 206 - -
Apr10g0388 279 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 274 IPR044823 -
Apr10g0388 279 MobiDBLite consensus disorder prediction 121 208 - -
Apr10g0388 279 MobiDBLite consensus disorder prediction 142 157 - -
Apr10g0388 279 Gene3D - 23 90 - -
Apr10g0388 279 MobiDBLite consensus disorder prediction 1 22 - -
Apr10g0388 279 Pfam Myb/SANT-like DNA-binding domain 22 115 IPR044822 -
Apr10g0388 279 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 12 274 - -
Apr10g0388 279 ProSiteProfiles Myb-like domain profile. 22 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0388 Apr-Chr10 9630931 9632069 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0388 23 92 Trihelix Transcription Factor Family AT3G14180 31.429 1.21e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr10g0388 Myb_DNA-bind_4 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0388 - - gmx:100810821 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0388 10 9630931 9632069 Apr10g0388 10 9630931 9632069 ECH